PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:30.4 nTPM
FANTOM5:38.3 Scaled Tags Per Million
Pig:12.8 nTPM
Mouse:13.8 nTPM
Allen mouse:1.8 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 30.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 21.6
2301 Female, age 85, both hemispheres 25.2
1984 Male, age 76, both hemispheres 23.9
2188 Female, age 91, both hemispheres 19.2
2090 Male, age 80, both hemispheres 18.0
Area postrema
nTPM: 15.6
2306 Male, age 80, both hemispheres 17.3
2054 Male, age 76, both hemispheres 15.0
2799 Male, age 61, both hemispheres 14.5
Dorsal cochlear nucleus
nTPM: 21.3
2802 Male, age 74, right hemisphere 22.4
2058 Male, age 76, both hemispheres 21.9
2187 Female, age 91, both hemispheres 21.9
2370 Male, age 61, both hemispheres 21.6
2378 Male, age 80, both hemispheres 18.4
Dorsal medullary reticular nucleus
nTPM: 25.7
2088 Male, age 76, both hemispheres 26.3
2373 Male, age 61, both hemispheres 25.9
2040 Female, age 85, both hemispheres 24.9
Dorsal motor vagal complex
nTPM: 21.8
2185 Male, age 76, both hemispheres 23.7
2797 Male, age 61, both hemispheres 23.6
2133 Female, age 91, both hemispheres 22.8
2643 Male, age 74, both hemispheres 22.4
2000 Male, age 74, unknown 21.9
2844 Male, age 55, unknown 21.3
2813 Female, age 72, unknown 20.3
2807 Female, age 85, both hemispheres 18.7
Dorsal tegmental nucleus
nTPM: 21.6
2358 Male, age 61, both hemispheres 23.2
1936 Male, age 76, left hemisphere 23.1
2083 Male, age 80, both hemispheres 21.9
2326 Male, age 74, both hemispheres 18.2
Dorsolateral tegmental area
nTPM: 18.2
2654 Male, age 80, both hemispheres 21.2
2337 Male, age 61, both hemispheres 19.8
2141 Male, age 76, both hemispheres 18.4
2751 Female, age 85, both hemispheres 17.2
2360 Male, age 74, both hemispheres 14.2
Gigantocellular reticular nuclei, medullary
nTPM: 24.4
2462 Male, age 74, both hemispheres 30.6
2310 Male, age 80, both hemispheres 29.9
2022 Male, age 76, right hemisphere 24.8
2387 Female, age 91, both hemispheres 21.5
1876 Female, age 85, both hemispheres 20.7
2314 Male, age 61, both hemispheres 18.7
Gigantocellular reticular nuclei, pars
nTPM: 27.4
2168 Male, age 76, both hemispheres 35.6
2084 Female, age 85, both hemispheres 26.4
2336 Male, age 61, both hemispheres 26.3
2330 Male, age 80, both hemispheres 25.1
2706 Male, age 80, both hemispheres 23.7
Inferior olive
nTPM: 18.1
2628 Female, age 91, both hemispheres 23.3
2085 Female, age 85, both hemispheres 19.9
2178 Male, age 61, both hemispheres 17.3
2379 Male, age 80, both hemispheres 16.1
2563 Male, age 74, both hemispheres 14.0
Kolliker-Fuse nucleus
nTPM: 22.1
2793 Female, age 91, left hemisphere 26.2
2163 Male, age 80, both hemispheres 24.6
2315 Male, age 76, right hemisphere 15.5
Lateral lemniscal nuclei
nTPM: 28.9
2169 Male, age 76, both hemispheres 34.0
2453 Male, age 74, right hemisphere 31.2
2036 Male, age 80, both hemispheres 27.8
2320 Female, age 91, left hemisphere 27.5
2746 Female, age 85, left hemisphere 24.2
Lateral medullary reticular nucleus
nTPM: 18.9
2044 Male, age 76, both hemispheres 25.3
2374 Male, age 61, both hemispheres 20.3
2804 Female, age 91, both hemispheres 19.7
2190 Female, age 85, both hemispheres 18.4
2852 Male, age 80, both hemispheres 17.6
2305 Male, age 74, both hemispheres 12.3
Lateral parabrachial nucleus
nTPM: 20.0
2139 Female, age 85, right hemisphere 25.9
2790 Male, age 61, both hemispheres 21.5
2013 Male, age 80, both hemispheres 18.5
2792 Male, age 76, both hemispheres 14.2
Lateral vestibular nucleus
nTPM: 27.1
2184 Male, age 76, both hemispheres 30.6
2311 Male, age 80, both hemispheres 23.6
Locus coeruleus
nTPM: 21.7
2720 Male, age 74, both hemispheres 26.1
2162 Male, age 80, both hemispheres 24.7
2123 Female, age 91, both hemispheres 22.8
1980 Male, age 76, both hemispheres 21.1
2317 Female, age 72, unknown 20.9
2014 Male, age 55, unknown 19.7
2788 Male, age 74, unknown 16.2
Medial olivary nucleus
nTPM: 14.7
2851 Male, age 80, both hemispheres 19.0
1962 Male, age 76, both hemispheres 15.4
2138 Female, age 91, both hemispheres 12.3
1943 Male, age 61, both hemispheres 12.1
Medial parabrachial nucleus
nTPM: 23.2
2156 Male, age 61, both hemispheres 26.0
2786 Male, age 76, both hemispheres 24.2
2854 Male, age 80, both hemispheres 23.6
2170 Female, age 91, both hemispheres 22.3
2463 Female, age 85, right hemisphere 19.9
Medial periolivary nuclei
nTPM: 25.9
2171 Female, age 85, both hemispheres 34.9
2063 Male, age 76, both hemispheres 31.0
2458 Female, age 91, both hemispheres 23.8
2791 Male, age 74, right hemisphere 21.7
2081 Male, age 80, both hemispheres 18.1
Medial vestibular nucleus
nTPM: 23.2
2093 Male, age 80, both hemispheres 26.4
2624 Male, age 61, both hemispheres 26.3
2803 Female, age 91, both hemispheres 23.7
2134 Male, age 76, both hemispheres 22.5
2743 Female, age 85, both hemispheres 20.1
2801 Male, age 74, both hemispheres 20.1
Motor facial nucleus
nTPM: 28.3
2062 Male, age 76, both hemispheres 35.0
2327 Male, age 80, both hemispheres 30.5
2795 Female, age 91, both hemispheres 29.1
2697 Female, age 85, both hemispheres 28.0
2365 Male, age 74, right hemisphere 24.8
2126 Male, age 61, both hemispheres 22.1
Motor hypoglossal nucleus
nTPM: 24.0
2132 Female, age 85, both hemispheres 27.4
2125 Female, age 91, both hemispheres 25.0
2182 Male, age 80, both hemispheres 25.0
2461 Male, age 61, both hemispheres 23.8
2277 Male, age 76, both hemispheres 18.7
Motor trigeminal nucleus
nTPM: 27.0
2560 Male, age 74, both hemispheres 29.0
2335 Male, age 61, both hemispheres 27.4
2321 Female, age 91, both hemispheres 26.8
2309 Male, age 76, both hemispheres 26.2
2079 Male, age 80, both hemispheres 25.7
Nuclei of the trapezoid body
nTPM: 29.3
2735 Female, age 85, both hemispheres 34.1
2159 Male, age 61, both hemispheres 31.1
1983 Male, age 76, both hemispheres 30.6
2368 Female, age 91, both hemispheres 26.5
2166 Male, age 80, both hemispheres 24.4
Nucleus ambiguus
nTPM: 28.8
2096 Female, age 85, both hemispheres 42.3
2071 Male, age 76, both hemispheres 15.3
Nucleus cuneatus
nTPM: 23.4
2131 Male, age 76, both hemispheres 32.1
2100 Male, age 76, both hemispheres 29.0
2564 Male, age 74, both hemispheres 25.7
2805 Female, age 91, both hemispheres 25.5
2381 Male, age 80, both hemispheres 24.2
2562 Male, age 61, both hemispheres 23.5
2376 Male, age 61, both hemispheres 18.6
2808 Female, age 85, both hemispheres 17.2
2380 Male, age 80, both hemispheres 15.1
Nucleus gracilis
nTPM: 17.7
2299 Female, age 85, both hemispheres 18.9
2382 Male, age 80, both hemispheres 17.7
2627 Male, age 74, both hemispheres 16.4
Nucleus raphe magnus
nTPM: 30.4
2172 Female, age 85, both hemispheres 38.6
2328 Male, age 80, both hemispheres 30.5
2160 Male, age 61, both hemispheres 30.1
2455 Male, age 74, both hemispheres 30.0
2051 Male, age 76, both hemispheres 28.6
2459 Female, age 91, both hemispheres 24.5
Nucleus raphe obscurus
nTPM: 17.7
2800 Male, age 61, midline 19.3
2845 Female, age 85, midline 18.2
2142 Male, age 76, midline 15.5
Nucleus raphe pallidus
nTPM: 17.6
2183 Male, age 80, midline 20.6
2145 Male, age 76, midline 18.1
1924 Male, age 61, midline 14.0
Nucleus tractus solitarii
nTPM: 18.7
2307 Male, age 80, both hemispheres 24.6
2191 Female, age 85, both hemispheres 17.8
2656 Male, age 76, both hemispheres 17.8
2144 Female, age 91, right hemisphere 14.5
Paramedian reticular nucleus
nTPM: 22.1
2050 Female, age 85, both hemispheres 25.9
2313 Male, age 61, both hemispheres 25.1
2057 Male, age 80, both hemispheres 20.9
2052 Male, age 76, both hemispheres 16.4
Parvicellular reticular nuclei
nTPM: 24.8
2558 Male, age 74, both hemispheres 30.8
2095 Male, age 76, both hemispheres 24.0
2119 Male, age 80, both hemispheres 19.6
Parvicellular reticular nuclei, medullary
nTPM: 25.4
2181 Male, age 80, left hemisphere 27.4
2189 Female, age 91, both hemispheres 25.3
2091 Female, age 85, both hemispheres 23.5
Pedunculopontine tegmental nucleus
nTPM: 18.3
2334 Male, age 80, both hemispheres 19.4
1921 Female, age 85, both hemispheres 19.2
2338 Male, age 61, both hemispheres 16.3
Peritrigeminal nucleus
nTPM: 21.1
2179 Male, age 61, both hemispheres 21.7
2067 Female, age 85, both hemispheres 20.8
2136 Male, age 76, both hemispheres 20.8
Pontine nuclei
nTPM: 26.7
2787 Female, age 85, both hemispheres 40.0
1968 Male, age 76, left hemisphere 34.7
1863 Male, age 55, unknown 30.1
2115 Male, age 80, left hemisphere 23.2
2109 Female, age 72, unknown 23.1
2727 Male, age 61, right hemisphere 21.8
2319 Female, age 91, both hemispheres 20.5
2454 Male, age 74, left hemisphere 20.3
Pontine raphe nucleus
nTPM: 23.4
2122 Female, age 85, midline 25.1
2853 Male, age 76, midline 21.6
Posteroventral cochlear nucleus
nTPM: 19.4
2752 Female, age 85, both hemispheres 24.7
2070 Male, age 76, both hemispheres 21.7
2371 Male, age 61, both hemispheres 21.3
2341 Male, age 80, both hemispheres 15.8
2135 Female, age 91, both hemispheres 13.5
Prepositus hypoglossal nucleus
nTPM: 20.0
2086 Male, age 80, both hemispheres 21.3
2855 Female, age 85, right hemisphere 18.6
Principal sensory trigeminal nucleus
nTPM: 26.7
2158 Male, age 61, both hemispheres 30.2
2324 Male, age 76, both hemispheres 29.3
2008 Male, age 80, left hemisphere 25.4
2367 Female, age 91, left hemisphere 22.0
Reticular pontine nucleus, caudal
nTPM: 26.6
2332 Male, age 80, right hemisphere 34.6
2457 Female, age 91, both hemispheres 26.1
2092 Male, age 76, both hemispheres 25.9
2559 Male, age 74, both hemispheres 19.6
Reticular pontine nucleus, oral
nTPM: 21.1
2167 Male, age 76, both hemispheres 22.8
2366 Female, age 91, both hemispheres 22.2
2012 Female, age 85, both hemispheres 21.0
2361 Male, age 74, both hemispheres 20.9
1939 Male, age 80, both hemispheres 18.4
Reticulotegmental nucleus
nTPM: 26.3
2325 Male, age 76, both hemispheres 27.7
2333 Male, age 80, both hemispheres 26.8
2452 Male, age 74, both hemispheres 26.0
2322 Female, age 91, both hemispheres 24.7
Spinal trigeminal nucleus, caudal
nTPM: 26.8
2447 Male, age 76, both hemispheres 30.6
2308 Male, age 80, both hemispheres 27.5
2390 Female, age 91, both hemispheres 26.5
2642 Male, age 74, both hemispheres 26.5
2312 Male, age 61, both hemispheres 22.9
Spinal trigeminal nucleus, interpolar
nTPM: 25.4
2625 Male, age 61, both hemispheres 27.2
2389 Female, age 91, both hemispheres 26.6
2066 Male, age 76, right hemisphere 26.5
2386 Female, age 85, both hemispheres 23.6
2033 Male, age 80, both hemispheres 22.9
Spinal trigeminal nucleus, oral
nTPM: 26.3
1978 Male, age 76, both hemispheres 28.5
2164 Male, age 80, both hemispheres 26.7
2737 Female, age 85, both hemispheres 23.6
Spinal vestibular nucleus
nTPM: 25.0
2186 Female, age 91, both hemispheres 28.6
2780 Male, age 80, both hemispheres 26.9
2796 Male, age 61, both hemispheres 26.6
2748 Male, age 76, both hemispheres 25.6
2806 Female, age 85, both hemispheres 21.8
2384 Male, age 74, both hemispheres 20.5
Subcoeruleus area
nTPM: 23.2
2089 Male, age 76, left hemisphere 28.6
2323 Female, age 91, left hemisphere 25.0
1958 Male, age 80, both hemispheres 23.8
2451 Male, age 74, both hemispheres 23.4
2369 Female, age 85, left hemisphere 15.2
Superior olive
nTPM: 25.1
2329 Male, age 80, right hemisphere 28.3
2561 Female, age 91, both hemispheres 28.3
1875 Female, age 85, both hemispheres 24.6
2020 Male, age 76, both hemispheres 23.8
2364 Male, age 74, right hemisphere 20.4
Superior vestibular nucleus
nTPM: 17.9
2061 Male, age 76, both hemispheres 21.6
2015 Male, age 80, both hemispheres 19.1
2383 Male, age 74, both hemispheres 13.0
Ventral medullary reticular nucleus
nTPM: 21.1
2060 Male, age 76, both hemispheres 25.4
2372 Male, age 61, both hemispheres 16.9
Ventral periolivary nuclei
nTPM: 26.9
2165 Male, age 80, both hemispheres 31.2
2130 Female, age 85, both hemispheres 29.6
2794 Female, age 91, left hemisphere 26.8
2023 Male, age 76, both hemispheres 20.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 21.3
2741 Female, age 85, both hemispheres 24.6
1986 Male, age 76, both hemispheres 22.4
2302 Female, age 91, both hemispheres 22.1
2180 Male, age 61, both hemispheres 18.9
2118 Male, age 80, both hemispheres 18.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 25.1
2449 Male, age 74, both hemispheres 29.7
1959 Male, age 76, both hemispheres 28.7
2456 Female, age 91, both hemispheres 25.4
2161 Male, age 80, both hemispheres 25.1
2840 Female, age 85, both hemispheres 24.4
2359 Male, age 61, both hemispheres 17.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 38.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 28.3
FF:10182-103D2 60 years, female 30.8
FF:10165-103B3 76 years, female 25.7
Medulla oblongata
Scaled Tags Per Million: 25.2
FF:10038-101F2 18-64 years, mixed 30.0
FF:10155-103A2 76 years, female 26.2
FF:10174-103C3 60 years, female 19.3
Pons
Scaled Tags Per Million: 38.3
FF:10033-101E6 18-54 years, mixed 38.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 12.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 10.4
Samples: 4

Max nTPM: 11.5
Min nTPM: 7.8
Sample A Female 10.8
Sample B Female 11.4
Sample C Male 11.5
Sample D Male 7.8
Pons
nTPM: 12.8
Samples: 4

Max nTPM: 16.2
Min nTPM: 8.5
Sample A Female 16.0
Sample B Female 8.5
Sample C Male 10.4
Sample D Male 16.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 13.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 13.8
Samples: 4

Max nTPM: 14.6
Min nTPM: 12.1
Sample A Male 14.5
Sample B Male 13.8
Sample C Female 14.6
Sample D Female 12.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.8
73423887 Antisense, RP_051019_03_B06, Mouse strain C57BL/6J (56 days, male) 1.8
Pons
Expression energy: 1.0
73423887 Antisense, RP_051019_03_B06, Mouse strain C57BL/6J (56 days, male) 1.0

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