PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:233.0 nTPM
FANTOM5:18.4 Scaled Tags Per Million
Pig:3.0 nTPM
Mouse:3.3 nTPM
Allen mouse:0.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 233.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 171.9
2301 Female, age 85, both hemispheres 261.5
1984 Male, age 76, both hemispheres 195.9
2188 Female, age 91, both hemispheres 132.4
2090 Male, age 80, both hemispheres 97.9
Area postrema
nTPM: 106.8
2306 Male, age 80, both hemispheres 148.7
2054 Male, age 76, both hemispheres 110.9
2799 Male, age 61, both hemispheres 60.7
Dorsal cochlear nucleus
nTPM: 143.1
2378 Male, age 80, both hemispheres 232.0
2370 Male, age 61, both hemispheres 182.4
2058 Male, age 76, both hemispheres 122.6
2187 Female, age 91, both hemispheres 107.5
2802 Male, age 74, right hemisphere 70.9
Dorsal medullary reticular nucleus
nTPM: 127.0
2373 Male, age 61, both hemispheres 144.7
2088 Male, age 76, both hemispheres 131.9
2040 Female, age 85, both hemispheres 104.5
Dorsal motor vagal complex
nTPM: 144.0
2185 Male, age 76, both hemispheres 270.7
2813 Female, age 72, unknown 219.6
2000 Male, age 74, unknown 161.2
2807 Female, age 85, both hemispheres 152.0
2844 Male, age 55, unknown 113.8
2643 Male, age 74, both hemispheres 93.3
2133 Female, age 91, both hemispheres 81.8
2797 Male, age 61, both hemispheres 59.8
Dorsal tegmental nucleus
nTPM: 187.7
2358 Male, age 61, both hemispheres 443.5
2083 Male, age 80, both hemispheres 121.0
1936 Male, age 76, left hemisphere 99.0
2326 Male, age 74, both hemispheres 87.4
Dorsolateral tegmental area
nTPM: 122.0
2360 Male, age 74, both hemispheres 169.7
2654 Male, age 80, both hemispheres 128.2
2337 Male, age 61, both hemispheres 127.7
2751 Female, age 85, both hemispheres 101.1
2141 Male, age 76, both hemispheres 83.5
Gigantocellular reticular nuclei, medullary
nTPM: 111.7
2387 Female, age 91, both hemispheres 157.9
2310 Male, age 80, both hemispheres 135.1
2314 Male, age 61, both hemispheres 117.3
1876 Female, age 85, both hemispheres 91.7
2462 Male, age 74, both hemispheres 87.9
2022 Male, age 76, right hemisphere 80.3
Gigantocellular reticular nuclei, pars
nTPM: 125.0
2168 Male, age 76, both hemispheres 142.3
2330 Male, age 80, both hemispheres 130.1
2084 Female, age 85, both hemispheres 124.1
2706 Male, age 80, both hemispheres 117.0
2336 Male, age 61, both hemispheres 111.6
Inferior olive
nTPM: 163.2
2628 Female, age 91, both hemispheres 210.3
2379 Male, age 80, both hemispheres 185.6
2085 Female, age 85, both hemispheres 183.5
2563 Male, age 74, both hemispheres 126.5
2178 Male, age 61, both hemispheres 110.3
Kolliker-Fuse nucleus
nTPM: 149.3
2793 Female, age 91, left hemisphere 242.4
2315 Male, age 76, right hemisphere 110.0
2163 Male, age 80, both hemispheres 95.4
Lateral lemniscal nuclei
nTPM: 122.1
2036 Male, age 80, both hemispheres 138.1
2169 Male, age 76, both hemispheres 133.5
2746 Female, age 85, left hemisphere 115.9
2320 Female, age 91, left hemisphere 115.3
2453 Male, age 74, right hemisphere 107.7
Lateral medullary reticular nucleus
nTPM: 139.5
2374 Male, age 61, both hemispheres 267.3
2190 Female, age 85, both hemispheres 132.5
2852 Male, age 80, both hemispheres 128.2
2044 Male, age 76, both hemispheres 117.0
2804 Female, age 91, both hemispheres 103.4
2305 Male, age 74, both hemispheres 88.3
Lateral parabrachial nucleus
nTPM: 103.4
2792 Male, age 76, both hemispheres 130.3
2139 Female, age 85, right hemisphere 115.5
2013 Male, age 80, both hemispheres 95.8
2790 Male, age 61, both hemispheres 72.2
Lateral vestibular nucleus
nTPM: 156.7
2184 Male, age 76, both hemispheres 175.8
2311 Male, age 80, both hemispheres 137.5
Locus coeruleus
nTPM: 111.5
2162 Male, age 80, both hemispheres 162.8
2788 Male, age 74, unknown 147.1
1980 Male, age 76, both hemispheres 127.9
2720 Male, age 74, both hemispheres 120.8
2014 Male, age 55, unknown 76.5
2123 Female, age 91, both hemispheres 73.0
2317 Female, age 72, unknown 72.7
Medial olivary nucleus
nTPM: 96.2
1962 Male, age 76, both hemispheres 141.4
2851 Male, age 80, both hemispheres 128.8
2138 Female, age 91, both hemispheres 70.3
1943 Male, age 61, both hemispheres 44.2
Medial parabrachial nucleus
nTPM: 118.2
2786 Male, age 76, both hemispheres 134.2
2170 Female, age 91, both hemispheres 123.1
2463 Female, age 85, right hemisphere 113.2
2854 Male, age 80, both hemispheres 112.0
2156 Male, age 61, both hemispheres 108.2
Medial periolivary nuclei
nTPM: 134.5
2458 Female, age 91, both hemispheres 198.9
2171 Female, age 85, both hemispheres 154.4
2063 Male, age 76, both hemispheres 138.8
2081 Male, age 80, both hemispheres 116.6
2791 Male, age 74, right hemisphere 63.9
Medial vestibular nucleus
nTPM: 114.0
2624 Male, age 61, both hemispheres 171.6
2801 Male, age 74, both hemispheres 130.5
2093 Male, age 80, both hemispheres 107.5
2803 Female, age 91, both hemispheres 97.2
2743 Female, age 85, both hemispheres 92.0
2134 Male, age 76, both hemispheres 85.0
Motor facial nucleus
nTPM: 134.7
2697 Female, age 85, both hemispheres 212.8
2327 Male, age 80, both hemispheres 141.3
2365 Male, age 74, right hemisphere 127.0
2062 Male, age 76, both hemispheres 126.3
2126 Male, age 61, both hemispheres 101.5
2795 Female, age 91, both hemispheres 99.3
Motor hypoglossal nucleus
nTPM: 233.0
2461 Male, age 61, both hemispheres 575.6
2182 Male, age 80, both hemispheres 281.4
2132 Female, age 85, both hemispheres 116.7
2277 Male, age 76, both hemispheres 106.1
2125 Female, age 91, both hemispheres 85.3
Motor trigeminal nucleus
nTPM: 119.9
2560 Male, age 74, both hemispheres 136.8
2335 Male, age 61, both hemispheres 130.6
2321 Female, age 91, both hemispheres 125.5
2309 Male, age 76, both hemispheres 112.1
2079 Male, age 80, both hemispheres 94.6
Nuclei of the trapezoid body
nTPM: 168.3
2368 Female, age 91, both hemispheres 214.0
1983 Male, age 76, both hemispheres 193.3
2166 Male, age 80, both hemispheres 159.4
2735 Female, age 85, both hemispheres 147.0
2159 Male, age 61, both hemispheres 127.9
Nucleus ambiguus
nTPM: 73.3
2071 Male, age 76, both hemispheres 74.0
2096 Female, age 85, both hemispheres 72.7
Nucleus cuneatus
nTPM: 147.1
2381 Male, age 80, both hemispheres 228.3
2380 Male, age 80, both hemispheres 223.6
2562 Male, age 61, both hemispheres 139.7
2808 Female, age 85, both hemispheres 135.2
2376 Male, age 61, both hemispheres 135.1
2100 Male, age 76, both hemispheres 129.9
2564 Male, age 74, both hemispheres 124.4
2131 Male, age 76, both hemispheres 105.2
2805 Female, age 91, both hemispheres 102.8
Nucleus gracilis
nTPM: 155.6
2382 Male, age 80, both hemispheres 227.3
2299 Female, age 85, both hemispheres 120.6
2627 Male, age 74, both hemispheres 118.9
Nucleus raphe magnus
nTPM: 143.1
2172 Female, age 85, both hemispheres 181.5
2459 Female, age 91, both hemispheres 171.3
2328 Male, age 80, both hemispheres 136.5
2455 Male, age 74, both hemispheres 129.3
2051 Male, age 76, both hemispheres 126.8
2160 Male, age 61, both hemispheres 113.2
Nucleus raphe obscurus
nTPM: 90.3
2142 Male, age 76, midline 107.7
2800 Male, age 61, midline 87.6
2845 Female, age 85, midline 75.5
Nucleus raphe pallidus
nTPM: 72.6
2183 Male, age 80, midline 116.9
1924 Male, age 61, midline 50.5
2145 Male, age 76, midline 50.5
Nucleus tractus solitarii
nTPM: 135.8
2191 Female, age 85, both hemispheres 187.0
2307 Male, age 80, both hemispheres 162.4
2656 Male, age 76, both hemispheres 154.8
2144 Female, age 91, right hemisphere 39.2
Paramedian reticular nucleus
nTPM: 99.9
2052 Male, age 76, both hemispheres 136.4
2057 Male, age 80, both hemispheres 115.1
2313 Male, age 61, both hemispheres 87.4
2050 Female, age 85, both hemispheres 60.9
Parvicellular reticular nuclei
nTPM: 125.6
2558 Male, age 74, both hemispheres 201.9
2095 Male, age 76, both hemispheres 90.3
2119 Male, age 80, both hemispheres 84.4
Parvicellular reticular nuclei, medullary
nTPM: 121.6
2181 Male, age 80, left hemisphere 160.9
2189 Female, age 91, both hemispheres 120.2
2091 Female, age 85, both hemispheres 83.8
Pedunculopontine tegmental nucleus
nTPM: 111.3
2338 Male, age 61, both hemispheres 147.6
2334 Male, age 80, both hemispheres 115.2
1921 Female, age 85, both hemispheres 71.1
Peritrigeminal nucleus
nTPM: 119.1
2067 Female, age 85, both hemispheres 130.8
2136 Male, age 76, both hemispheres 118.6
2179 Male, age 61, both hemispheres 107.8
Pontine nuclei
nTPM: 103.8
1968 Male, age 76, left hemisphere 166.9
2115 Male, age 80, left hemisphere 140.9
2454 Male, age 74, left hemisphere 123.3
2319 Female, age 91, both hemispheres 108.1
2787 Female, age 85, both hemispheres 97.4
2727 Male, age 61, right hemisphere 82.9
1863 Male, age 55, unknown 60.6
2109 Female, age 72, unknown 50.2
Pontine raphe nucleus
nTPM: 103.1
2122 Female, age 85, midline 106.5
2853 Male, age 76, midline 99.7
Posteroventral cochlear nucleus
nTPM: 105.4
2371 Male, age 61, both hemispheres 145.7
2341 Male, age 80, both hemispheres 116.1
2752 Female, age 85, both hemispheres 114.7
2135 Female, age 91, both hemispheres 84.6
2070 Male, age 76, both hemispheres 65.7
Prepositus hypoglossal nucleus
nTPM: 105.7
2086 Male, age 80, both hemispheres 124.1
2855 Female, age 85, right hemisphere 87.3
Principal sensory trigeminal nucleus
nTPM: 136.0
2367 Female, age 91, left hemisphere 204.9
2158 Male, age 61, both hemispheres 132.6
2324 Male, age 76, both hemispheres 125.2
2008 Male, age 80, left hemisphere 81.1
Reticular pontine nucleus, caudal
nTPM: 175.8
2457 Female, age 91, both hemispheres 271.5
2332 Male, age 80, right hemisphere 171.4
2559 Male, age 74, both hemispheres 153.0
2092 Male, age 76, both hemispheres 107.5
Reticular pontine nucleus, oral
nTPM: 159.7
2366 Female, age 91, both hemispheres 315.2
2361 Male, age 74, both hemispheres 188.5
2167 Male, age 76, both hemispheres 141.6
2012 Female, age 85, both hemispheres 91.9
1939 Male, age 80, both hemispheres 61.2
Reticulotegmental nucleus
nTPM: 116.9
2452 Male, age 74, both hemispheres 131.7
2333 Male, age 80, both hemispheres 117.6
2322 Female, age 91, both hemispheres 111.3
2325 Male, age 76, both hemispheres 107.0
Spinal trigeminal nucleus, caudal
nTPM: 148.1
2447 Male, age 76, both hemispheres 182.5
2390 Female, age 91, both hemispheres 164.6
2308 Male, age 80, both hemispheres 136.9
2312 Male, age 61, both hemispheres 135.2
2642 Male, age 74, both hemispheres 121.5
Spinal trigeminal nucleus, interpolar
nTPM: 150.3
2389 Female, age 91, both hemispheres 260.6
2386 Female, age 85, both hemispheres 155.0
2066 Male, age 76, right hemisphere 123.9
2625 Male, age 61, both hemispheres 121.6
2033 Male, age 80, both hemispheres 90.6
Spinal trigeminal nucleus, oral
nTPM: 159.7
1978 Male, age 76, both hemispheres 214.6
2164 Male, age 80, both hemispheres 134.7
2737 Female, age 85, both hemispheres 129.9
Spinal vestibular nucleus
nTPM: 133.2
2748 Male, age 76, both hemispheres 189.5
2780 Male, age 80, both hemispheres 134.5
2384 Male, age 74, both hemispheres 126.2
2806 Female, age 85, both hemispheres 122.1
2796 Male, age 61, both hemispheres 113.7
2186 Female, age 91, both hemispheres 113.1
Subcoeruleus area
nTPM: 91.9
2451 Male, age 74, both hemispheres 121.4
2089 Male, age 76, left hemisphere 111.2
2323 Female, age 91, left hemisphere 91.8
2369 Female, age 85, left hemisphere 71.1
1958 Male, age 80, both hemispheres 64.3
Superior olive
nTPM: 159.8
2561 Female, age 91, both hemispheres 267.4
2364 Male, age 74, right hemisphere 151.7
2329 Male, age 80, right hemisphere 145.3
2020 Male, age 76, both hemispheres 140.3
1875 Female, age 85, both hemispheres 94.2
Superior vestibular nucleus
nTPM: 131.2
2383 Male, age 74, both hemispheres 156.6
2061 Male, age 76, both hemispheres 134.4
2015 Male, age 80, both hemispheres 102.6
Ventral medullary reticular nucleus
nTPM: 152.1
2060 Male, age 76, both hemispheres 162.7
2372 Male, age 61, both hemispheres 141.5
Ventral periolivary nuclei
nTPM: 127.0
2165 Male, age 80, both hemispheres 179.3
2794 Female, age 91, left hemisphere 151.7
2130 Female, age 85, both hemispheres 131.0
2023 Male, age 76, both hemispheres 46.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 113.8
1986 Male, age 76, both hemispheres 136.0
2741 Female, age 85, both hemispheres 123.1
2180 Male, age 61, both hemispheres 108.4
2118 Male, age 80, both hemispheres 101.6
2302 Female, age 91, both hemispheres 99.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 149.1
2161 Male, age 80, both hemispheres 188.3
2359 Male, age 61, both hemispheres 181.7
2840 Female, age 85, both hemispheres 162.1
2456 Female, age 91, both hemispheres 161.1
2449 Male, age 74, both hemispheres 123.4
1959 Male, age 76, both hemispheres 77.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 18.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 18.4
FF:10182-103D2 60 years, female 20.5
FF:10165-103B3 76 years, female 16.3
Medulla oblongata
Scaled Tags Per Million: 13.9
FF:10155-103A2 76 years, female 18.8
FF:10174-103C3 60 years, female 15.8
FF:10038-101F2 18-64 years, mixed 7.3
Pons
Scaled Tags Per Million: 16.7
FF:10033-101E6 18-54 years, mixed 16.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 3.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 2.8
Samples: 4

Max nTPM: 2.9
Min nTPM: 2.6
Sample A Female 2.8
Sample B Female 2.9
Sample C Male 2.7
Sample D Male 2.6
Pons
nTPM: 3.1
Samples: 4

Max nTPM: 3.5
Min nTPM: 2.3
Sample A Female 3.5
Sample B Female 3.3
Sample C Male 2.3
Sample D Male 3.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 3.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 3.3
Samples: 4

Max nTPM: 3.7
Min nTPM: 3.0
Sample A Male 3.4
Sample B Male 3.7
Sample C Female 3.0
Sample D Female 3.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.5
73606576 Antisense, RP_051130_01_B12, Mouse strain C57BL/6J (56 days, male) 0.5
Pons
Expression energy: 0.2
73606576 Antisense, RP_051130_01_B12, Mouse strain C57BL/6J (56 days, male) 0.2

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