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  • DTX3
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:102.2 nTPM
FANTOM5:67.7 Scaled Tags Per Million
Pig:70.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA059654
Glial cells Low
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 102.2
Samples: 246

Max nTPM: 149.9
Min nTPM: 57.7
Std nTPM: 16.1
Median nTPM: 102.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 149.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 140.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 139.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 138.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 137.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 136.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 135.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 135.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 135.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 133.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 132.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 132.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 130.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 129.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 129.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 127.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 127.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 127.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 126.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 125.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 125.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 125.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 124.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 123.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 123.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 122.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 122.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 122.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 122.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 119.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 119.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 119.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 119.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 119.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 119.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 118.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 118.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 118.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 117.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 117.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 117.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 117.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 116.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 115.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 115.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 114.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 114.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 113.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 113.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 113.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 113.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 113.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 113.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 112.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 112.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 112.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 112.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 112.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 112.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 112.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 112.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 111.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 111.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 111.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 111.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 111.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 111.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 110.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 110.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 110.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 110.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 110.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 109.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 109.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 109.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 109.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 109.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 109.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 109.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 109.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 109.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 108.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 108.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 108.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 108.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 108.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 108.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 108.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 107.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 107.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 107.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 107.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 107.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 107.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 107.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 107.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 106.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 106.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 106.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 106.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 105.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 105.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 105.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 105.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 105.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 105.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 104.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 104.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 104.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 104.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 104.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 104.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 103.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 103.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 103.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 103.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 103.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 103.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 103.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 103.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 102.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 102.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 102.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 102.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 102.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 102.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 102.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 101.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 101.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 101.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 101.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 101.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 101.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 100.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 100.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 100.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 100.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 100.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 100.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 100.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 100.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 100.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 100.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 99.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 99.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 99.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 99.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 99.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 99.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 98.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 98.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 98.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 98.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 98.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 97.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 97.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 97.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 97.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 97.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 97.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 96.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 96.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 96.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 95.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 95.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 95.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 94.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 94.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 94.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 94.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 94.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 94.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 93.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 93.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 93.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 92.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 92.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 92.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 92.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 92.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 92.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 92.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 91.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 91.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 90.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 90.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 90.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 90.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 90.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 89.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 89.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 89.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 89.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 89.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 89.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 89.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 89.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 89.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 88.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 88.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 88.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 88.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 88.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 88.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 87.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 87.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 87.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 87.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 87.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 86.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 86.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 85.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 85.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 85.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 84.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 84.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 83.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 82.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 81.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 81.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 80.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 80.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 80.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 80.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 79.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 79.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 78.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 77.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 77.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 77.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 76.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 76.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 75.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 75.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 75.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 74.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 73.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 71.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 70.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 70.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 68.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 68.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 68.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 67.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 62.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 57.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

67.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 67.7
FF:10164-103B2 76 years, female 67.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.1
Pig sample Sample description nTPM
Caudate
nTPM: 70.0
Samples: 4

Max nTPM: 85.5
Min nTPM: 58.8
Sample A Female 58.8
Sample B Female 75.0
Sample C Male 85.5
Sample D Male 60.8

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