PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		45.504
Mouse brain, Intensity
Ponsi 		45.968
RNA expressioni
HPA Brain:39.2 nTPM
FANTOM5:27.9 Scaled Tags Per Million
Pig:22.3 nTPM
Mouse:21.6 nTPM
Allen mouse:5.2 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA044465
Medulla oblongata mean intensity 45.504
intensityi
FRONT BACK
Nucleus of the solitary tract 45.504
Raphe magnus nucleus 7.590
Cochlear nucleus 12.743
Lateral paragigantocellular nucleus 16.264
Raphe pallidus nucleus 2.798
Facial nucleus 18.794
Hypoglossal nucleus 24.332
Ambiguus nucleus 12.940
External cuneate nucleus 15.722
Inferior olivary nucleus 3.731
Raphe obscures nucleus 10.234
Dorsal motor nucleus of vagus 25.856
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 9.217
Parabrachial nucleus 19.127
Principle sensory trigeminal nucleus 17.499
Locus coeruleus 45.968
Pontine nucleus 15.012
Vestibular nucleus 16.370
Pontine reticular nucleus, oral 3.035
Lateral lemniscus 0.246
Superior paraolivary nucleus 1.905

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 39.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 25.0
1984 Male, age 76, both hemispheres 28.7
2090 Male, age 80, both hemispheres 26.3
2301 Female, age 85, both hemispheres 22.7
2188 Female, age 91, both hemispheres 22.4
Area postrema
nTPM: 19.2
2054 Male, age 76, both hemispheres 22.1
2799 Male, age 61, both hemispheres 17.8
2306 Male, age 80, both hemispheres 17.7
Dorsal cochlear nucleus
nTPM: 23.8
2058 Male, age 76, both hemispheres 31.2
2370 Male, age 61, both hemispheres 24.7
2378 Male, age 80, both hemispheres 23.5
2802 Male, age 74, right hemisphere 20.6
2187 Female, age 91, both hemispheres 18.7
Dorsal medullary reticular nucleus
nTPM: 28.0
2088 Male, age 76, both hemispheres 31.2
2373 Male, age 61, both hemispheres 27.3
2040 Female, age 85, both hemispheres 25.5
Dorsal motor vagal complex
nTPM: 23.5
2133 Female, age 91, both hemispheres 28.4
2844 Male, age 55, unknown 27.4
2000 Male, age 74, unknown 26.2
2185 Male, age 76, both hemispheres 24.7
2797 Male, age 61, both hemispheres 22.9
2643 Male, age 74, both hemispheres 20.6
2807 Female, age 85, both hemispheres 20.2
2813 Female, age 72, unknown 17.6
Dorsal tegmental nucleus
nTPM: 23.9
2358 Male, age 61, both hemispheres 28.8
1936 Male, age 76, left hemisphere 24.1
2083 Male, age 80, both hemispheres 24.0
2326 Male, age 74, both hemispheres 18.8
Dorsolateral tegmental area
nTPM: 22.6
2141 Male, age 76, both hemispheres 27.1
2337 Male, age 61, both hemispheres 25.8
2654 Male, age 80, both hemispheres 21.3
2360 Male, age 74, both hemispheres 20.5
2751 Female, age 85, both hemispheres 18.3
Gigantocellular reticular nuclei, medullary
nTPM: 25.1
2462 Male, age 74, both hemispheres 41.9
2310 Male, age 80, both hemispheres 32.0
2022 Male, age 76, right hemisphere 20.5
2387 Female, age 91, both hemispheres 19.9
2314 Male, age 61, both hemispheres 19.1
1876 Female, age 85, both hemispheres 16.8
Gigantocellular reticular nuclei, pars
nTPM: 30.0
2168 Male, age 76, both hemispheres 38.9
2330 Male, age 80, both hemispheres 30.9
2084 Female, age 85, both hemispheres 28.7
2706 Male, age 80, both hemispheres 27.0
2336 Male, age 61, both hemispheres 24.6
Inferior olive
nTPM: 20.8
2085 Female, age 85, both hemispheres 23.6
2178 Male, age 61, both hemispheres 21.3
2628 Female, age 91, both hemispheres 20.3
2379 Male, age 80, both hemispheres 19.4
2563 Male, age 74, both hemispheres 19.4
Kolliker-Fuse nucleus
nTPM: 22.2
2163 Male, age 80, both hemispheres 24.6
2793 Female, age 91, left hemisphere 21.6
2315 Male, age 76, right hemisphere 20.5
Lateral lemniscal nuclei
nTPM: 33.8
2453 Male, age 74, right hemisphere 38.4
2036 Male, age 80, both hemispheres 34.1
2169 Male, age 76, both hemispheres 32.3
2320 Female, age 91, left hemisphere 32.3
2746 Female, age 85, left hemisphere 31.9
Lateral medullary reticular nucleus
nTPM: 21.1
2044 Male, age 76, both hemispheres 26.5
2804 Female, age 91, both hemispheres 22.2
2190 Female, age 85, both hemispheres 20.9
2374 Male, age 61, both hemispheres 20.4
2852 Male, age 80, both hemispheres 19.1
2305 Male, age 74, both hemispheres 17.4
Lateral parabrachial nucleus
nTPM: 25.4
2139 Female, age 85, right hemisphere 35.1
2790 Male, age 61, both hemispheres 29.9
2013 Male, age 80, both hemispheres 22.9
2792 Male, age 76, both hemispheres 13.9
Lateral vestibular nucleus
nTPM: 25.2
2184 Male, age 76, both hemispheres 30.8
2311 Male, age 80, both hemispheres 19.6
Locus coeruleus
nTPM: 29.6
2123 Female, age 91, both hemispheres 34.8
1980 Male, age 76, both hemispheres 33.5
2162 Male, age 80, both hemispheres 31.1
2317 Female, age 72, unknown 30.7
2014 Male, age 55, unknown 30.6
2720 Male, age 74, both hemispheres 24.9
2788 Male, age 74, unknown 21.4
Medial olivary nucleus
nTPM: 16.8
2851 Male, age 80, both hemispheres 18.6
2138 Female, age 91, both hemispheres 17.2
1962 Male, age 76, both hemispheres 16.8
1943 Male, age 61, both hemispheres 14.8
Medial parabrachial nucleus
nTPM: 24.1
2156 Male, age 61, both hemispheres 33.2
2463 Female, age 85, right hemisphere 24.0
2786 Male, age 76, both hemispheres 24.0
2854 Male, age 80, both hemispheres 20.8
2170 Female, age 91, both hemispheres 18.5
Medial periolivary nuclei
nTPM: 32.1
2171 Female, age 85, both hemispheres 43.6
2063 Male, age 76, both hemispheres 32.8
2081 Male, age 80, both hemispheres 29.3
2791 Male, age 74, right hemisphere 27.8
2458 Female, age 91, both hemispheres 26.8
Medial vestibular nucleus
nTPM: 27.1
2134 Male, age 76, both hemispheres 32.1
2743 Female, age 85, both hemispheres 30.1
2624 Male, age 61, both hemispheres 30.0
2093 Male, age 80, both hemispheres 27.8
2801 Male, age 74, both hemispheres 22.4
2803 Female, age 91, both hemispheres 20.3
Motor facial nucleus
nTPM: 32.9
2062 Male, age 76, both hemispheres 40.5
2327 Male, age 80, both hemispheres 40.3
2365 Male, age 74, right hemisphere 31.8
2126 Male, age 61, both hemispheres 31.2
2795 Female, age 91, both hemispheres 27.8
2697 Female, age 85, both hemispheres 25.5
Motor hypoglossal nucleus
nTPM: 24.9
2125 Female, age 91, both hemispheres 27.8
2277 Male, age 76, both hemispheres 26.6
2132 Female, age 85, both hemispheres 24.7
2182 Male, age 80, both hemispheres 23.5
2461 Male, age 61, both hemispheres 21.8
Motor trigeminal nucleus
nTPM: 29.5
2079 Male, age 80, both hemispheres 36.5
2560 Male, age 74, both hemispheres 31.3
2335 Male, age 61, both hemispheres 29.6
2321 Female, age 91, both hemispheres 27.6
2309 Male, age 76, both hemispheres 22.5
Nuclei of the trapezoid body
nTPM: 38.3
2735 Female, age 85, both hemispheres 47.1
2159 Male, age 61, both hemispheres 40.6
2166 Male, age 80, both hemispheres 35.2
1983 Male, age 76, both hemispheres 34.9
2368 Female, age 91, both hemispheres 33.6
Nucleus ambiguus
nTPM: 31.8
2096 Female, age 85, both hemispheres 46.4
2071 Male, age 76, both hemispheres 17.2
Nucleus cuneatus
nTPM: 25.2
2100 Male, age 76, both hemispheres 34.5
2131 Male, age 76, both hemispheres 33.5
2562 Male, age 61, both hemispheres 29.5
2376 Male, age 61, both hemispheres 27.9
2564 Male, age 74, both hemispheres 26.1
2805 Female, age 91, both hemispheres 20.6
2808 Female, age 85, both hemispheres 19.6
2381 Male, age 80, both hemispheres 17.9
2380 Male, age 80, both hemispheres 16.8
Nucleus gracilis
nTPM: 18.3
2299 Female, age 85, both hemispheres 20.3
2627 Male, age 74, both hemispheres 19.0
2382 Male, age 80, both hemispheres 15.7
Nucleus raphe magnus
nTPM: 39.2
2160 Male, age 61, both hemispheres 50.0
2172 Female, age 85, both hemispheres 47.0
2455 Male, age 74, both hemispheres 39.8
2328 Male, age 80, both hemispheres 37.0
2051 Male, age 76, both hemispheres 30.8
2459 Female, age 91, both hemispheres 30.4
Nucleus raphe obscurus
nTPM: 18.6
2800 Male, age 61, midline 23.2
2845 Female, age 85, midline 17.2
2142 Male, age 76, midline 15.3
Nucleus raphe pallidus
nTPM: 20.6
2183 Male, age 80, midline 24.7
1924 Male, age 61, midline 21.5
2145 Male, age 76, midline 15.5
Nucleus tractus solitarii
nTPM: 25.2
2307 Male, age 80, both hemispheres 30.8
2656 Male, age 76, both hemispheres 27.2
2191 Female, age 85, both hemispheres 23.1
2144 Female, age 91, right hemisphere 19.7
Paramedian reticular nucleus
nTPM: 25.0
2313 Male, age 61, both hemispheres 29.9
2050 Female, age 85, both hemispheres 27.1
2057 Male, age 80, both hemispheres 27.0
2052 Male, age 76, both hemispheres 16.0
Parvicellular reticular nuclei
nTPM: 28.2
2558 Male, age 74, both hemispheres 38.7
2119 Male, age 80, both hemispheres 24.2
2095 Male, age 76, both hemispheres 21.7
Parvicellular reticular nuclei, medullary
nTPM: 24.1
2091 Female, age 85, both hemispheres 27.1
2189 Female, age 91, both hemispheres 23.4
2181 Male, age 80, left hemisphere 21.9
Pedunculopontine tegmental nucleus
nTPM: 22.2
1921 Female, age 85, both hemispheres 22.7
2338 Male, age 61, both hemispheres 22.4
2334 Male, age 80, both hemispheres 21.5
Peritrigeminal nucleus
nTPM: 25.9
2179 Male, age 61, both hemispheres 30.7
2067 Female, age 85, both hemispheres 25.8
2136 Male, age 76, both hemispheres 21.1
Pontine nuclei
nTPM: 33.8
2787 Female, age 85, both hemispheres 47.2
2727 Male, age 61, right hemisphere 41.3
2115 Male, age 80, left hemisphere 35.3
1863 Male, age 55, unknown 34.4
2109 Female, age 72, unknown 33.9
1968 Male, age 76, left hemisphere 32.3
2319 Female, age 91, both hemispheres 23.0
2454 Male, age 74, left hemisphere 22.9
Pontine raphe nucleus
nTPM: 29.1
2122 Female, age 85, midline 34.3
2853 Male, age 76, midline 23.8
Posteroventral cochlear nucleus
nTPM: 22.0
2752 Female, age 85, both hemispheres 29.5
2371 Male, age 61, both hemispheres 25.3
2070 Male, age 76, both hemispheres 22.9
2341 Male, age 80, both hemispheres 18.1
2135 Female, age 91, both hemispheres 14.0
Prepositus hypoglossal nucleus
nTPM: 26.7
2086 Male, age 80, both hemispheres 31.4
2855 Female, age 85, right hemisphere 22.0
Principal sensory trigeminal nucleus
nTPM: 35.1
2158 Male, age 61, both hemispheres 51.2
2008 Male, age 80, left hemisphere 36.0
2367 Female, age 91, left hemisphere 27.0
2324 Male, age 76, both hemispheres 26.3
Reticular pontine nucleus, caudal
nTPM: 28.5
2332 Male, age 80, right hemisphere 40.9
2092 Male, age 76, both hemispheres 26.1
2457 Female, age 91, both hemispheres 25.9
2559 Male, age 74, both hemispheres 21.0
Reticular pontine nucleus, oral
nTPM: 23.9
2361 Male, age 74, both hemispheres 29.7
2012 Female, age 85, both hemispheres 28.9
2366 Female, age 91, both hemispheres 21.0
2167 Male, age 76, both hemispheres 20.3
1939 Male, age 80, both hemispheres 19.8
Reticulotegmental nucleus
nTPM: 27.2
2333 Male, age 80, both hemispheres 29.6
2325 Male, age 76, both hemispheres 28.8
2452 Male, age 74, both hemispheres 26.7
2322 Female, age 91, both hemispheres 23.7
Spinal trigeminal nucleus, caudal
nTPM: 24.0
2447 Male, age 76, both hemispheres 30.7
2390 Female, age 91, both hemispheres 25.2
2308 Male, age 80, both hemispheres 22.3
2642 Male, age 74, both hemispheres 21.1
2312 Male, age 61, both hemispheres 20.7
Spinal trigeminal nucleus, interpolar
nTPM: 26.1
2066 Male, age 76, right hemisphere 32.7
2625 Male, age 61, both hemispheres 28.1
2389 Female, age 91, both hemispheres 25.3
2033 Male, age 80, both hemispheres 23.4
2386 Female, age 85, both hemispheres 21.3
Spinal trigeminal nucleus, oral
nTPM: 26.4
2164 Male, age 80, both hemispheres 27.3
2737 Female, age 85, both hemispheres 27.2
1978 Male, age 76, both hemispheres 24.7
Spinal vestibular nucleus
nTPM: 23.0
2186 Female, age 91, both hemispheres 27.1
2780 Male, age 80, both hemispheres 24.2
2748 Male, age 76, both hemispheres 22.7
2796 Male, age 61, both hemispheres 22.5
2384 Male, age 74, both hemispheres 21.3
2806 Female, age 85, both hemispheres 20.2
Subcoeruleus area
nTPM: 25.4
2089 Male, age 76, left hemisphere 37.1
2323 Female, age 91, left hemisphere 26.7
1958 Male, age 80, both hemispheres 24.4
2451 Male, age 74, both hemispheres 23.1
2369 Female, age 85, left hemisphere 15.4
Superior olive
nTPM: 29.8
2329 Male, age 80, right hemisphere 33.1
1875 Female, age 85, both hemispheres 32.2
2561 Female, age 91, both hemispheres 31.4
2364 Male, age 74, right hemisphere 26.7
2020 Male, age 76, both hemispheres 25.6
Superior vestibular nucleus
nTPM: 20.3
2061 Male, age 76, both hemispheres 25.5
2015 Male, age 80, both hemispheres 21.4
2383 Male, age 74, both hemispheres 14.0
Ventral medullary reticular nucleus
nTPM: 22.7
2060 Male, age 76, both hemispheres 24.3
2372 Male, age 61, both hemispheres 21.2
Ventral periolivary nuclei
nTPM: 36.1
2130 Female, age 85, both hemispheres 47.3
2165 Male, age 80, both hemispheres 40.4
2794 Female, age 91, left hemisphere 34.7
2023 Male, age 76, both hemispheres 22.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 24.9
2302 Female, age 91, both hemispheres 27.6
2741 Female, age 85, both hemispheres 27.2
2180 Male, age 61, both hemispheres 24.9
1986 Male, age 76, both hemispheres 23.2
2118 Male, age 80, both hemispheres 21.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 29.6
2449 Male, age 74, both hemispheres 36.5
2456 Female, age 91, both hemispheres 32.7
2161 Male, age 80, both hemispheres 31.0
1959 Male, age 76, both hemispheres 28.1
2359 Male, age 61, both hemispheres 27.5
2840 Female, age 85, both hemispheres 21.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 27.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 20.4
FF:10182-103D2 60 years, female 22.2
FF:10165-103B3 76 years, female 18.5
Medulla oblongata
Scaled Tags Per Million: 19.2
FF:10038-101F2 18-64 years, mixed 22.5
FF:10155-103A2 76 years, female 17.9
FF:10174-103C3 60 years, female 17.2
Pons
Scaled Tags Per Million: 27.9
FF:10033-101E6 18-54 years, mixed 27.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 22.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 15.7
Samples: 4

Max nTPM: 17.8
Min nTPM: 11.4
Sample A Female 16.0
Sample B Female 17.6
Sample C Male 17.8
Sample D Male 11.4
Pons
nTPM: 22.3
Samples: 4

Max nTPM: 31.1
Min nTPM: 18.2
Sample A Female 31.1
Sample B Female 19.8
Sample C Male 18.2
Sample D Male 20.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 21.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 21.6
Samples: 4

Max nTPM: 23.1
Min nTPM: 20.0
Sample A Male 23.1
Sample B Male 20.0
Sample C Female 21.4
Sample D Female 21.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 5.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.2
73992940 Antisense, RP_051214_03_D04, Mouse strain C57BL/6J (56 days, male) 5.5
69608911 Antisense, RP_050426_04_E01, Mouse strain C57BL/6J (56 days, male) 4.9
Pons
Expression energy: 4.0
73992940 Antisense, RP_051214_03_D04, Mouse strain C57BL/6J (56 days, male) 4.5
69608911 Antisense, RP_050426_04_E01, Mouse strain C57BL/6J (56 days, male) 3.5

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