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MRPL41
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:184.3 nTPM
FANTOM5:35.5 Scaled Tags Per Million
Pig:26.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA024550Antibody HPA027160
Glial cells MediumMedium
Neuronal cells MediumHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 184.3
Samples: 246

Max nTPM: 384.1
Min nTPM: 52.8
Std nTPM: 57.7
Median nTPM: 179.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 384.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 370.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 347.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 344.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 344.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 308.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 301.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 301.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 293.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 290.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 285.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 284.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 284.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 283.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 281.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 280.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 280.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 275.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 275.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 273.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 272.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 267.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 265.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 264.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 264.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 259.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 257.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 255.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 255.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 252.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 251.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 246.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 245.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 243.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 241.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 239.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 239.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 239.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 237.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 237.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 237.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 236.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 234.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 234.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 232.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 232.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 231.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 230.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 227.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 227.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 226.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 226.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 225.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 225.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 223.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 222.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 222.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 222.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 220.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 220.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 219.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 219.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 217.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 217.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 217.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 216.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 215.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 214.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 212.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 212.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 210.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 209.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 206.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 206.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 206.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 206.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 206.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 206.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 205.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 202.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 201.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 200.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 200.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 200.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 200.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 198.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 198.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 198.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 198.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 196.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 196.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 196.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 196.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 196.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 196.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 195.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 195.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 195.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 195.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 194.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 194.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 193.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 193.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 192.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 192.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 192.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 192.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 191.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 191.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 190.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 189.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 188.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 188.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 188.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 186.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 185.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 184.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 184.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 184.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 183.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 182.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 180.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 179.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 179.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 177.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 177.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 177.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 177.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 176.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 175.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 174.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 173.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 172.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 171.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 170.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 170.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 170.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 170.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 169.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 169.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 166.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 166.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 166.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 165.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 164.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 164.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 163.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 163.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 163.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 163.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 163.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 162.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 162.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 162.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 161.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 161.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 159.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 159.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 159.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 159.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 159.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 158.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 158.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 158.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 157.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 157.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 157.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 156.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 153.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 153.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 153.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 152.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 152.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 152.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 152.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 152.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 152.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 152.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 150.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 149.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 148.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 147.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 146.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 146.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 146.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 145.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 145.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 144.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 143.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 143.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 143.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 143.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 141.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 140.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 139.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 139.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 138.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 137.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 137.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 136.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 135.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 135.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 135.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 135.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 134.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 133.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 132.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 131.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 129.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 129.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 128.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 127.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 127.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 125.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 124.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 123.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 122.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 122.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 122.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 122.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 120.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 116.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 114.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 114.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 112.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 111.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 111.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 109.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 108.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 107.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 100.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 100.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 95.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 94.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 89.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 89.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 87.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 82.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 78.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 74.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 73.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 73.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 66.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 56.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 53.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 52.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

35.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 35.5
FF:10164-103B2 76 years, female 35.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.5
Pig sample Sample description nTPM
Caudate
nTPM: 26.5
Samples: 4

Max nTPM: 28.9
Min nTPM: 23.7
Sample A Female 23.7
Sample B Female 28.4
Sample C Male 28.9
Sample D Male 24.9

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