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NDUFA12
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  • NDUFA12
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:114.0 nTPM
FANTOM5:154.3 Scaled Tags Per Million
Pig:167.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA039903
Glial cells Medium
Neuronal cells High


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 114.0
Samples: 246

Max nTPM: 246.1
Min nTPM: 72.3
Std nTPM: 26.6
Median nTPM: 108.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 246.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 235.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 224.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 213.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 213.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 191.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 177.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 166.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 166.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 166.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 165.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 164.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 160.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 159.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 155.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 154.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 152.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 151.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 151.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 150.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 149.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 147.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 146.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 145.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 145.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 143.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 143.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 141.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 141.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 140.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 139.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 139.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 138.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 137.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 134.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 134.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 133.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 133.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 133.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 132.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 131.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 131.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 130.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 130.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 130.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 129.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 129.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 129.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 129.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 128.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 128.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 127.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 127.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 127.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 127.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 127.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 126.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 126.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 126.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 125.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 124.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 124.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 124.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 123.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 123.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 122.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 122.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 121.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 121.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 121.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 121.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 121.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 121.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 120.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 120.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 120.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 120.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 119.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 119.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 119.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 119.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 118.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 118.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 118.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 117.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 117.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 117.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 117.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 117.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 117.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 117.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 116.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 116.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 116.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 116.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 116.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 115.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 115.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 114.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 114.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 114.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 114.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 114.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 114.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 113.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 113.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 113.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 112.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 112.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 112.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 112.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 111.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 111.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 111.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 110.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 110.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 110.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 110.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 110.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 109.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 109.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 109.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 108.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 108.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 108.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 108.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 107.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 107.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 107.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 107.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 107.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 107.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 107.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 106.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 106.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 106.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 106.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 106.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 106.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 105.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 105.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 105.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 105.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 105.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 104.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 104.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 104.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 104.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 104.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 104.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 104.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 104.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 104.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 103.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 103.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 103.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 103.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 103.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 102.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 102.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 102.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 101.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 101.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 101.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 101.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 100.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 100.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 100.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 100.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 100.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 100.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 100.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 100.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 100.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 99.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 99.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 99.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 99.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 99.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 99.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 98.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 98.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 97.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 97.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 97.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 97.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 96.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 96.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 96.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 96.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 96.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 95.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 95.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 95.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 95.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 95.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 94.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 93.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 93.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 93.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 93.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 93.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 93.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 93.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 93.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 92.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 92.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 92.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 92.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 91.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 91.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 91.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 91.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 91.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 90.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 90.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 90.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 90.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 90.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 89.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 87.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 87.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 87.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 85.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 85.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 85.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 84.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 83.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 83.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 81.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 81.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 80.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 80.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 80.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 78.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 78.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 76.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 76.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 75.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 75.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 75.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 74.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 73.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 73.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 72.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 72.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

154.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 154.3
FF:10164-103B2 76 years, female 154.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

167.7
Pig sample Sample description nTPM
Caudate
nTPM: 167.7
Samples: 4

Max nTPM: 192.8
Min nTPM: 151.2
Sample A Female 151.2
Sample B Female 165.6
Sample C Male 192.8
Sample D Male 161.0

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