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ZFP36L1
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  • ZFP36L1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:70.7 nTPM
FANTOM5:248.3 Scaled Tags Per Million
Pig:93.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001301
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 70.7
Samples: 246

Max nTPM: 325.9
Min nTPM: 14.5
Std nTPM: 45.4
Median nTPM: 60.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 325.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 312.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 299.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 265.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 245.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 200.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 194.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 190.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 175.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 173.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 167.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 150.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 139.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 139.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 137.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 132.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 131.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 130.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 130.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 126.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 125.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 124.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 122.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 120.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 114.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 114.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 110.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 109.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 107.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 107.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 107.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 103.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 103.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 103.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 99.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 96.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 95.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 94.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 93.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 92.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 92.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 91.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 91.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 91.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 91.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 90.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 88.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 88.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 87.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 87.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 86.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 85.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 84.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 84.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 83.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 83.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 83.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 83.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 83.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 82.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 82.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 81.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 81.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 81.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 81.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 81.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 79.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 79.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 79.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 78.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 78.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 77.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 76.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 75.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 75.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 74.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 74.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 74.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 74.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 73.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 73.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 73.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 73.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 73.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 73.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 73.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 72.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 72.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 72.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 71.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 71.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 71.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 70.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 70.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 70.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 70.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 70.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 69.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 69.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 69.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 69.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 69.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 68.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 67.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 66.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 66.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 66.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 66.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 66.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 66.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 65.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 64.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 64.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 64.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 64.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 63.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 63.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 63.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 63.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 61.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 61.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 61.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 60.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 60.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 60.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 60.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 59.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 59.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 59.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 58.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 58.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 58.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 58.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 57.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 57.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 57.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 56.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 56.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 56.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 56.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 56.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 55.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 55.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 55.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 55.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 54.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 54.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 53.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 53.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 53.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 52.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 52.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 52.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 52.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 52.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 51.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 51.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 51.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 50.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 50.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 49.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 49.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 49.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 48.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 48.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 48.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 47.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 47.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 47.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 47.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 47.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 46.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 46.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 46.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 46.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 46.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 46.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 44.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 44.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 43.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 43.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 43.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 43.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 43.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 42.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 42.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 42.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 42.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 41.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 41.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 40.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 40.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 40.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 40.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 40.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 40.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 39.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 39.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 39.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 38.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 38.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 37.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 37.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 37.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 37.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 36.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 36.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 36.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 36.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 36.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 36.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 36.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 35.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 35.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 35.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 35.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 35.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 35.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 34.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 34.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 34.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 33.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 33.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 33.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 32.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 32.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 31.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 31.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 31.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 31.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 30.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 30.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 26.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 26.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 26.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 26.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 25.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 24.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 23.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 23.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 22.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 21.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 21.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 19.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 17.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 14.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

248.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 248.3
FF:10164-103B2 76 years, female 248.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.8
Pig sample Sample description nTPM
Caudate
nTPM: 93.8
Samples: 4

Max nTPM: 102.1
Min nTPM: 83.3
Sample A Female 99.6
Sample B Female 90.0
Sample C Male 102.1
Sample D Male 83.3

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