PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		25.020
Mouse brain, Intensity
Ponsi 		4.972
Protein expressioni No data
RNA expressioni
HPA Brain:46.5 nTPM
FANTOM5:91.1 Scaled Tags Per Million
Pig:54.3 nTPM
Mouse:48.3 nTPM
Allen mouse:1.6 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA022862
Medulla oblongata mean intensity 25.020
intensityi
FRONT BACK
Nucleus of the solitary tract 1.194
Raphe magnus nucleus 2.933
Cochlear nucleus 25.020
Lateral paragigantocellular nucleus 0.985
Raphe pallidus nucleus 1.042
Facial nucleus 3.439
Hypoglossal nucleus 4.096
Ambiguus nucleus 4.611
External cuneate nucleus 3.043
Inferior olivary nucleus 2.123
Raphe obscures nucleus 3.286
Dorsal motor nucleus of vagus 9.846
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 1.744
Parabrachial nucleus 4.972
Principle sensory trigeminal nucleus 2.143
Locus coeruleus 2.525
Pontine nucleus 3.193
Vestibular nucleus 1.582
Pontine reticular nucleus, oral 3.655
Lateral lemniscus 0.776
Superior paraolivary nucleus 2.577

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 46.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 17.5
1984 Male, age 76, both hemispheres 21.3
2301 Female, age 85, both hemispheres 18.0
2188 Female, age 91, both hemispheres 17.3
2090 Male, age 80, both hemispheres 13.3
Area postrema
nTPM: 8.8
2054 Male, age 76, both hemispheres 19.2
2799 Male, age 61, both hemispheres 3.6
2306 Male, age 80, both hemispheres 3.4
Dorsal cochlear nucleus
nTPM: 15.2
2187 Female, age 91, both hemispheres 23.5
2370 Male, age 61, both hemispheres 18.7
2058 Male, age 76, both hemispheres 13.0
2802 Male, age 74, right hemisphere 12.0
2378 Male, age 80, both hemispheres 9.0
Dorsal medullary reticular nucleus
nTPM: 19.8
2040 Female, age 85, both hemispheres 27.7
2088 Male, age 76, both hemispheres 18.3
2373 Male, age 61, both hemispheres 13.5
Dorsal motor vagal complex
nTPM: 18.0
2844 Male, age 55, unknown 28.5
2133 Female, age 91, both hemispheres 26.3
2813 Female, age 72, unknown 24.7
2000 Male, age 74, unknown 23.1
2807 Female, age 85, both hemispheres 14.2
2185 Male, age 76, both hemispheres 10.4
2643 Male, age 74, both hemispheres 8.5
2797 Male, age 61, both hemispheres 8.4
Dorsal tegmental nucleus
nTPM: 15.0
2083 Male, age 80, both hemispheres 16.6
1936 Male, age 76, left hemisphere 16.4
2358 Male, age 61, both hemispheres 13.7
2326 Male, age 74, both hemispheres 13.4
Dorsolateral tegmental area
nTPM: 19.3
2751 Female, age 85, both hemispheres 28.8
2141 Male, age 76, both hemispheres 23.3
2654 Male, age 80, both hemispheres 19.2
2360 Male, age 74, both hemispheres 17.8
2337 Male, age 61, both hemispheres 7.5
Gigantocellular reticular nuclei, medullary
nTPM: 20.1
2462 Male, age 74, both hemispheres 32.0
1876 Female, age 85, both hemispheres 26.2
2310 Male, age 80, both hemispheres 20.6
2387 Female, age 91, both hemispheres 18.2
2022 Male, age 76, right hemisphere 17.2
2314 Male, age 61, both hemispheres 6.6
Gigantocellular reticular nuclei, pars
nTPM: 20.3
2168 Male, age 76, both hemispheres 31.2
2084 Female, age 85, both hemispheres 25.6
2706 Male, age 80, both hemispheres 15.2
2336 Male, age 61, both hemispheres 14.9
2330 Male, age 80, both hemispheres 14.6
Inferior olive
nTPM: 6.1
2628 Female, age 91, both hemispheres 10.1
2563 Male, age 74, both hemispheres 6.9
2178 Male, age 61, both hemispheres 5.1
2085 Female, age 85, both hemispheres 5.0
2379 Male, age 80, both hemispheres 3.4
Kolliker-Fuse nucleus
nTPM: 15.1
2163 Male, age 80, both hemispheres 21.0
2793 Female, age 91, left hemisphere 12.3
2315 Male, age 76, right hemisphere 11.9
Lateral lemniscal nuclei
nTPM: 22.4
2036 Male, age 80, both hemispheres 25.2
2453 Male, age 74, right hemisphere 24.6
2169 Male, age 76, both hemispheres 23.8
2746 Female, age 85, left hemisphere 22.6
2320 Female, age 91, left hemisphere 15.7
Lateral medullary reticular nucleus
nTPM: 11.2
2044 Male, age 76, both hemispheres 19.0
2190 Female, age 85, both hemispheres 12.4
2305 Male, age 74, both hemispheres 11.7
2804 Female, age 91, both hemispheres 8.4
2852 Male, age 80, both hemispheres 8.3
2374 Male, age 61, both hemispheres 7.6
Lateral parabrachial nucleus
nTPM: 17.4
2139 Female, age 85, right hemisphere 24.3
2790 Male, age 61, both hemispheres 20.7
2013 Male, age 80, both hemispheres 15.7
2792 Male, age 76, both hemispheres 9.0
Lateral vestibular nucleus
nTPM: 15.2
2184 Male, age 76, both hemispheres 16.6
2311 Male, age 80, both hemispheres 13.9
Locus coeruleus
nTPM: 46.5
2788 Male, age 74, unknown 64.0
2014 Male, age 55, unknown 56.0
2123 Female, age 91, both hemispheres 49.9
2720 Male, age 74, both hemispheres 43.8
1980 Male, age 76, both hemispheres 43.2
2317 Female, age 72, unknown 35.0
2162 Male, age 80, both hemispheres 33.7
Medial olivary nucleus
nTPM: 7.9
2851 Male, age 80, both hemispheres 11.7
2138 Female, age 91, both hemispheres 8.0
1962 Male, age 76, both hemispheres 7.8
1943 Male, age 61, both hemispheres 4.0
Medial parabrachial nucleus
nTPM: 22.8
2170 Female, age 91, both hemispheres 25.7
2463 Female, age 85, right hemisphere 25.1
2786 Male, age 76, both hemispheres 22.9
2854 Male, age 80, both hemispheres 22.4
2156 Male, age 61, both hemispheres 17.7
Medial periolivary nuclei
nTPM: 25.5
2171 Female, age 85, both hemispheres 44.1
2063 Male, age 76, both hemispheres 32.0
2791 Male, age 74, right hemisphere 21.5
2458 Female, age 91, both hemispheres 15.6
2081 Male, age 80, both hemispheres 14.4
Medial vestibular nucleus
nTPM: 17.3
2743 Female, age 85, both hemispheres 21.3
2134 Male, age 76, both hemispheres 19.5
2093 Male, age 80, both hemispheres 16.9
2801 Male, age 74, both hemispheres 16.4
2803 Female, age 91, both hemispheres 16.1
2624 Male, age 61, both hemispheres 13.4
Motor facial nucleus
nTPM: 24.8
2062 Male, age 76, both hemispheres 34.8
2697 Female, age 85, both hemispheres 25.7
2365 Male, age 74, right hemisphere 24.5
2126 Male, age 61, both hemispheres 22.8
2327 Male, age 80, both hemispheres 22.0
2795 Female, age 91, both hemispheres 19.1
Motor hypoglossal nucleus
nTPM: 19.2
2461 Male, age 61, both hemispheres 24.8
2277 Male, age 76, both hemispheres 23.2
2132 Female, age 85, both hemispheres 18.7
2125 Female, age 91, both hemispheres 17.3
2182 Male, age 80, both hemispheres 12.0
Motor trigeminal nucleus
nTPM: 18.9
2309 Male, age 76, both hemispheres 20.8
2335 Male, age 61, both hemispheres 20.5
2079 Male, age 80, both hemispheres 19.7
2560 Male, age 74, both hemispheres 18.0
2321 Female, age 91, both hemispheres 15.4
Nuclei of the trapezoid body
nTPM: 33.2
2159 Male, age 61, both hemispheres 47.3
2735 Female, age 85, both hemispheres 44.0
1983 Male, age 76, both hemispheres 34.3
2166 Male, age 80, both hemispheres 22.8
2368 Female, age 91, both hemispheres 17.8
Nucleus ambiguus
nTPM: 10.8
2096 Female, age 85, both hemispheres 15.2
2071 Male, age 76, both hemispheres 6.4
Nucleus cuneatus
nTPM: 12.3
2562 Male, age 61, both hemispheres 19.4
2131 Male, age 76, both hemispheres 19.0
2376 Male, age 61, both hemispheres 15.3
2381 Male, age 80, both hemispheres 13.1
2100 Male, age 76, both hemispheres 11.0
2805 Female, age 91, both hemispheres 10.1
2564 Male, age 74, both hemispheres 9.7
2808 Female, age 85, both hemispheres 8.4
2380 Male, age 80, both hemispheres 5.2
Nucleus gracilis
nTPM: 6.3
2627 Male, age 74, both hemispheres 10.8
2299 Female, age 85, both hemispheres 4.4
2382 Male, age 80, both hemispheres 3.7
Nucleus raphe magnus
nTPM: 31.6
2172 Female, age 85, both hemispheres 45.3
2160 Male, age 61, both hemispheres 45.0
2455 Male, age 74, both hemispheres 32.3
2051 Male, age 76, both hemispheres 26.7
2328 Male, age 80, both hemispheres 22.6
2459 Female, age 91, both hemispheres 17.5
Nucleus raphe obscurus
nTPM: 7.2
2800 Male, age 61, midline 8.6
2845 Female, age 85, midline 8.2
2142 Male, age 76, midline 4.8
Nucleus raphe pallidus
nTPM: 12.9
2183 Male, age 80, midline 18.8
1924 Male, age 61, midline 13.1
2145 Male, age 76, midline 6.6
Nucleus tractus solitarii
nTPM: 20.7
2656 Male, age 76, both hemispheres 38.5
2144 Female, age 91, right hemisphere 19.7
2307 Male, age 80, both hemispheres 14.5
2191 Female, age 85, both hemispheres 10.0
Paramedian reticular nucleus
nTPM: 24.7
2050 Female, age 85, both hemispheres 38.5
2313 Male, age 61, both hemispheres 25.5
2057 Male, age 80, both hemispheres 18.0
2052 Male, age 76, both hemispheres 16.8
Parvicellular reticular nuclei
nTPM: 20.6
2558 Male, age 74, both hemispheres 23.7
2119 Male, age 80, both hemispheres 19.9
2095 Male, age 76, both hemispheres 18.2
Parvicellular reticular nuclei, medullary
nTPM: 26.1
2091 Female, age 85, both hemispheres 28.1
2189 Female, age 91, both hemispheres 27.0
2181 Male, age 80, left hemisphere 23.2
Pedunculopontine tegmental nucleus
nTPM: 20.5
2334 Male, age 80, both hemispheres 27.9
1921 Female, age 85, both hemispheres 19.6
2338 Male, age 61, both hemispheres 14.0
Peritrigeminal nucleus
nTPM: 20.8
2179 Male, age 61, both hemispheres 26.0
2067 Female, age 85, both hemispheres 22.1
2136 Male, age 76, both hemispheres 14.1
Pontine nuclei
nTPM: 25.9
2727 Male, age 61, right hemisphere 41.6
2787 Female, age 85, both hemispheres 33.2
2109 Female, age 72, unknown 30.2
1863 Male, age 55, unknown 25.5
1968 Male, age 76, left hemisphere 24.9
2454 Male, age 74, left hemisphere 21.9
2115 Male, age 80, left hemisphere 15.5
2319 Female, age 91, both hemispheres 14.3
Pontine raphe nucleus
nTPM: 29.6
2122 Female, age 85, midline 34.4
2853 Male, age 76, midline 24.8
Posteroventral cochlear nucleus
nTPM: 17.8
2752 Female, age 85, both hemispheres 36.4
2070 Male, age 76, both hemispheres 22.0
2371 Male, age 61, both hemispheres 14.1
2135 Female, age 91, both hemispheres 9.8
2341 Male, age 80, both hemispheres 6.9
Prepositus hypoglossal nucleus
nTPM: 14.6
2855 Female, age 85, right hemisphere 15.8
2086 Male, age 80, both hemispheres 13.4
Principal sensory trigeminal nucleus
nTPM: 23.5
2158 Male, age 61, both hemispheres 38.9
2008 Male, age 80, left hemisphere 24.0
2324 Male, age 76, both hemispheres 16.3
2367 Female, age 91, left hemisphere 14.8
Reticular pontine nucleus, caudal
nTPM: 18.1
2092 Male, age 76, both hemispheres 22.3
2332 Male, age 80, right hemisphere 20.3
2559 Male, age 74, both hemispheres 15.3
2457 Female, age 91, both hemispheres 14.3
Reticular pontine nucleus, oral
nTPM: 28.2
2361 Male, age 74, both hemispheres 41.1
1939 Male, age 80, both hemispheres 29.5
2012 Female, age 85, both hemispheres 28.0
2167 Male, age 76, both hemispheres 27.4
2366 Female, age 91, both hemispheres 14.9
Reticulotegmental nucleus
nTPM: 18.6
2325 Male, age 76, both hemispheres 24.4
2322 Female, age 91, both hemispheres 19.2
2452 Male, age 74, both hemispheres 16.5
2333 Male, age 80, both hemispheres 14.2
Spinal trigeminal nucleus, caudal
nTPM: 19.3
2390 Female, age 91, both hemispheres 25.1
2447 Male, age 76, both hemispheres 19.9
2642 Male, age 74, both hemispheres 18.2
2312 Male, age 61, both hemispheres 17.1
2308 Male, age 80, both hemispheres 16.1
Spinal trigeminal nucleus, interpolar
nTPM: 25.0
2386 Female, age 85, both hemispheres 27.2
2033 Male, age 80, both hemispheres 26.9
2066 Male, age 76, right hemisphere 24.6
2389 Female, age 91, both hemispheres 24.6
2625 Male, age 61, both hemispheres 21.9
Spinal trigeminal nucleus, oral
nTPM: 22.3
2737 Female, age 85, both hemispheres 24.9
1978 Male, age 76, both hemispheres 22.9
2164 Male, age 80, both hemispheres 19.2
Spinal vestibular nucleus
nTPM: 18.6
2780 Male, age 80, both hemispheres 23.3
2186 Female, age 91, both hemispheres 23.1
2796 Male, age 61, both hemispheres 18.1
2806 Female, age 85, both hemispheres 16.8
2384 Male, age 74, both hemispheres 15.4
2748 Male, age 76, both hemispheres 14.7
Subcoeruleus area
nTPM: 25.1
2323 Female, age 91, left hemisphere 35.3
1958 Male, age 80, both hemispheres 26.7
2369 Female, age 85, left hemisphere 23.5
2451 Male, age 74, both hemispheres 20.5
2089 Male, age 76, left hemisphere 19.5
Superior olive
nTPM: 23.0
1875 Female, age 85, both hemispheres 35.5
2364 Male, age 74, right hemisphere 22.5
2020 Male, age 76, both hemispheres 19.6
2329 Male, age 80, right hemisphere 19.0
2561 Female, age 91, both hemispheres 18.6
Superior vestibular nucleus
nTPM: 16.1
2015 Male, age 80, both hemispheres 21.4
2061 Male, age 76, both hemispheres 14.4
2383 Male, age 74, both hemispheres 12.3
Ventral medullary reticular nucleus
nTPM: 13.2
2060 Male, age 76, both hemispheres 19.7
2372 Male, age 61, both hemispheres 6.8
Ventral periolivary nuclei
nTPM: 25.3
2130 Female, age 85, both hemispheres 36.1
2165 Male, age 80, both hemispheres 31.3
2794 Female, age 91, left hemisphere 19.4
2023 Male, age 76, both hemispheres 14.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 16.5
2741 Female, age 85, both hemispheres 23.4
2180 Male, age 61, both hemispheres 20.2
1986 Male, age 76, both hemispheres 17.6
2302 Female, age 91, both hemispheres 13.8
2118 Male, age 80, both hemispheres 7.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 22.4
2449 Male, age 74, both hemispheres 29.6
2840 Female, age 85, both hemispheres 28.9
1959 Male, age 76, both hemispheres 21.7
2359 Male, age 61, both hemispheres 20.3
2161 Male, age 80, both hemispheres 18.7
2456 Female, age 91, both hemispheres 15.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 91.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 19.1
FF:10165-103B3 76 years, female 21.6
FF:10182-103D2 60 years, female 16.6
Medulla oblongata
Scaled Tags Per Million: 14.9
FF:10155-103A2 76 years, female 18.1
FF:10038-101F2 18-64 years, mixed 16.6
FF:10174-103C3 60 years, female 10.0
Pons
Scaled Tags Per Million: 91.1
FF:10033-101E6 18-54 years, mixed 91.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 54.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 27.2
Samples: 4

Max nTPM: 35.4
Min nTPM: 6.6
Sample A Female 35.4
Sample B Female 33.4
Sample C Male 33.4
Sample D Male 6.6
Pons
nTPM: 54.3
Samples: 4

Max nTPM: 95.4
Min nTPM: 31.3
Sample A Female 95.4
Sample B Female 31.3
Sample C Male 50.6
Sample D Male 39.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 48.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 48.3
Samples: 4

Max nTPM: 50.6
Min nTPM: 46.6
Sample A Male 50.6
Sample B Male 49.0
Sample C Female 46.8
Sample D Female 46.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.4
70546039 Antisense, RP_050623_03_E01, Mouse strain C57BL/6J (56 days, male) 1.4
71924387 Antisense, RP_050623_03_E01, Mouse strain C57BL/6J (56 days, male) 1.2
Pons
Expression energy: 1.6
71924387 Antisense, RP_050623_03_E01, Mouse strain C57BL/6J (56 days, male) 1.6
70546039 Antisense, RP_050623_03_E01, Mouse strain C57BL/6J (56 days, male) 1.2

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