We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
BCAP31
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • BCAP31
TISSUE PRIMARY DATA HIPPOCAMPUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Hippocampus
Tissue proteome
HIPPOCAMPUS - Expression summary
Protein expression
Hippocampusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

47.225
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:118.2 nTPM
GTEx:140.5 nTPM
FANTOM5:39.5 Scaled Tags Per Million

HIPPOCAMPUS - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003906Antibody CAB015350Antibody CAB015424
Glial cells MediumMediumNot detected
Neuronal cells HighMediumLow







HIPPOCAMPAL FORMATION - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA003906
Hippocampal formation mean intensity 47.225
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Polymorph layer of the dentate gyrus 29.462
Molecular layer of the dentate gyrus 21.260
Granular dentate gyrus 30.471
CA1 - oriens layer 29.865
CA1 - pyramidal layer 30.867
CA1 - radiatum layer 29.368
CA2 - oriens layer 28.915
CA2 - pyramidal layer 47.225
CA2 - radiatum layer 32.534
CA3 - oriens layer 32.216
CA3 - pyramidal layer 38.376
CA3 - radiatum layer 29.901
Stratum lucidum 26.518
Lacunosum moleculare 18.880
Subiculum 24.330

HIPPOCAMPUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.2
Sample id Sample description nTPM
Hippocampus
nTPM: 118.2
1898 Male, age 80, left hemisphere 152.4
1855 Male, age 76, left hemisphere 139.5
2621 Female, age 67, right hemisphere 124.9
2529 Female, age 94, left hemisphere 102.2
2148 Female, age 91, left hemisphere 101.3
1911 Female, age 85, right hemisphere 89.1

HIPPOCAMPUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 140.5
Samples: 197

Max nTPM: 243.7
Min nTPM: 88.7
Std nTPM: 30.4
Median nTPM: 136.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 243.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 240.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 231.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 227.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 218.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 211.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 209.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 206.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 204.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 202.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 199.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 198.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 196.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 189.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 186.5
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 186.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 185.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 184.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 184.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 184.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 183.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 179.9
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 176.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 175.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 174.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 174.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 173.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 173.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 172.0
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 170.9
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 170.6
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 168.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 167.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 166.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 164.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 162.9
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 161.5
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 161.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 161.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 160.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 160.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 160.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 160.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 159.0
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 159.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 158.5
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 158.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 158.4
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 158.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 157.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 157.7
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 156.9
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 156.6
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 156.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 156.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 155.3
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 154.7
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 153.1
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 153.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 152.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 152.6
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 152.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 150.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 150.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 149.9
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 149.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 149.6
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 149.4
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 149.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 148.9
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 148.8
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 148.3
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 146.4
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 146.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 146.2
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 146.1
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 145.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 145.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 144.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 143.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 142.3
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 141.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 141.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 141.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 140.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 140.8
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 139.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 139.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 139.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 138.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 138.8
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 137.9
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 137.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 136.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 136.5
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 136.4
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 136.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 136.3
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 136.3
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 135.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 135.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 134.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 134.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 133.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 133.6
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 133.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 132.9
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 132.4
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 132.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 131.1
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 130.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 130.4
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 130.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 130.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 129.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 129.3
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 128.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 128.0
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 127.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 127.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 127.0
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 127.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 126.1
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 125.8
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 125.4
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 125.4
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 124.8
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 124.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 124.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 123.7
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 123.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 123.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 123.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 123.0
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 122.3
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 122.0
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 121.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 121.2
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 121.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 121.1
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 119.8
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 119.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 119.5
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 119.4
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 118.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 118.8
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 118.2
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 117.6
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 115.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 115.2
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 115.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 115.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 114.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 114.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 114.6
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 114.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 114.2
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 114.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 113.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 113.7
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 113.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 112.9
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 112.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 112.4
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 112.0
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 111.0
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 109.9
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 109.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 109.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 108.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 108.5
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 107.6
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 107.6
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 107.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 106.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 106.1
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 106.1
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 105.7
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 105.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 104.7
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 104.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 104.1
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 103.6
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 103.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 103.1
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 103.0
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 102.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 101.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 101.1
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 100.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 100.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 98.9
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 98.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 97.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 95.3
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 91.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 88.7
Show allShow less

HIPPOCAMPUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

39.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.5
FF:10169-103B7 60 years, female 46.7
FF:10153-102I9 76 years, female 32.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org