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S100A16
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  • S100A16
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:72.7 nTPM
FANTOM5:26.9 Scaled Tags Per Million
Pig:215.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA045841
Glial cells Low
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 72.7
Samples: 246

Max nTPM: 227.9
Min nTPM: 21.3
Std nTPM: 36.1
Median nTPM: 65.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 227.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 209.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 207.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 206.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 197.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 178.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 175.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 163.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 151.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 150.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 145.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 141.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 137.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 135.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 134.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 132.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 129.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 129.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 128.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 125.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 124.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 123.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 121.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 121.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 119.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 116.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 114.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 114.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 111.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 108.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 108.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 107.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 107.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 106.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 106.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 105.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 104.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 104.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 102.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 102.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 101.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 100.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 100.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 99.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 99.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 98.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 98.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 97.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 97.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 97.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 97.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 96.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 94.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 94.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 94.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 93.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 93.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 92.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 92.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 91.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 90.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 89.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 88.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 88.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 88.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 88.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 87.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 87.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 86.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 85.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 85.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 85.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 85.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 84.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 84.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 84.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 82.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 81.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 81.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 80.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 79.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 79.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 79.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 78.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 78.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 77.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 77.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 77.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 77.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 76.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 76.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 76.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 74.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 74.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 73.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 73.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 72.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 72.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 72.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 71.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 71.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 71.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 70.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 70.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 70.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 69.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 69.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 68.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 68.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 67.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 67.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 67.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 67.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 67.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 66.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 66.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 66.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 66.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 66.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 66.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 65.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 65.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 65.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 65.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 64.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 64.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 64.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 64.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 63.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 63.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 63.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 63.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 63.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 63.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 62.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 62.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 62.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 62.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 62.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 62.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 62.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 61.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 61.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 60.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 60.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 60.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 60.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 59.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 58.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 58.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 57.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 56.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 56.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 56.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 55.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 55.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 54.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 54.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 54.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 53.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 53.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 53.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 52.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 52.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 52.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 51.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 51.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 51.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 50.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 49.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 49.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 49.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 49.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 47.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 47.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 47.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 47.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 47.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 46.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 46.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 45.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 45.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 45.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 45.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 45.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 44.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 44.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 44.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 44.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 44.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 44.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 43.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 43.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 43.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 43.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 43.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 43.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 43.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 42.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 42.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 42.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 41.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 41.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 40.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 40.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 40.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 40.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 40.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 40.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 40.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 39.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 39.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 39.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 39.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 39.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 39.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 38.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 38.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 38.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 37.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 37.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 36.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 36.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 36.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 36.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 35.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 35.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 34.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 34.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 33.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 33.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 32.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 32.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 32.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 32.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 32.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 30.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 29.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 27.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 27.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 26.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 25.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 25.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 24.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 22.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 21.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

26.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 26.9
FF:10164-103B2 76 years, female 26.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

215.7
Pig sample Sample description nTPM
Caudate
nTPM: 215.7
Samples: 4

Max nTPM: 264.6
Min nTPM: 174.5
Sample A Female 174.5
Sample B Female 240.7
Sample C Male 264.6
Sample D Male 182.8

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