PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:61.6 nTPM
FANTOM5:24.2 Scaled Tags Per Million
Pig:22.8 nTPM
Mouse:38.6 nTPM
Allen mouse:2.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 61.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 40.5
2090 Male, age 80, both hemispheres 46.7
1984 Male, age 76, both hemispheres 39.6
2301 Female, age 85, both hemispheres 38.7
2188 Female, age 91, both hemispheres 37.1
Area postrema
nTPM: 48.6
2799 Male, age 61, both hemispheres 59.9
2306 Male, age 80, both hemispheres 47.5
2054 Male, age 76, both hemispheres 38.3
Dorsal cochlear nucleus
nTPM: 50.7
2802 Male, age 74, right hemisphere 54.4
2370 Male, age 61, both hemispheres 54.2
2058 Male, age 76, both hemispheres 51.4
2378 Male, age 80, both hemispheres 48.4
2187 Female, age 91, both hemispheres 45.0
Dorsal medullary reticular nucleus
nTPM: 48.3
2373 Male, age 61, both hemispheres 52.0
2088 Male, age 76, both hemispheres 48.5
2040 Female, age 85, both hemispheres 44.3
Dorsal motor vagal complex
nTPM: 49.5
2797 Male, age 61, both hemispheres 62.9
2643 Male, age 74, both hemispheres 57.1
2844 Male, age 55, unknown 53.0
2133 Female, age 91, both hemispheres 51.3
2000 Male, age 74, unknown 47.8
2185 Male, age 76, both hemispheres 47.0
2807 Female, age 85, both hemispheres 42.4
2813 Female, age 72, unknown 34.9
Dorsal tegmental nucleus
nTPM: 46.3
2083 Male, age 80, both hemispheres 49.4
2358 Male, age 61, both hemispheres 47.9
1936 Male, age 76, left hemisphere 44.7
2326 Male, age 74, both hemispheres 43.1
Dorsolateral tegmental area
nTPM: 44.1
2141 Male, age 76, both hemispheres 48.0
2654 Male, age 80, both hemispheres 47.3
2337 Male, age 61, both hemispheres 44.2
2751 Female, age 85, both hemispheres 42.6
2360 Male, age 74, both hemispheres 38.5
Gigantocellular reticular nuclei, medullary
nTPM: 44.9
2462 Male, age 74, both hemispheres 51.7
2314 Male, age 61, both hemispheres 48.7
2310 Male, age 80, both hemispheres 47.0
2387 Female, age 91, both hemispheres 44.6
2022 Male, age 76, right hemisphere 39.4
1876 Female, age 85, both hemispheres 37.7
Gigantocellular reticular nuclei, pars
nTPM: 44.9
2168 Male, age 76, both hemispheres 50.8
2084 Female, age 85, both hemispheres 47.3
2330 Male, age 80, both hemispheres 42.5
2706 Male, age 80, both hemispheres 42.5
2336 Male, age 61, both hemispheres 41.3
Inferior olive
nTPM: 47.4
2178 Male, age 61, both hemispheres 52.5
2379 Male, age 80, both hemispheres 47.8
2085 Female, age 85, both hemispheres 47.5
2563 Male, age 74, both hemispheres 46.5
2628 Female, age 91, both hemispheres 42.8
Kolliker-Fuse nucleus
nTPM: 40.0
2163 Male, age 80, both hemispheres 44.3
2793 Female, age 91, left hemisphere 38.8
2315 Male, age 76, right hemisphere 37.0
Lateral lemniscal nuclei
nTPM: 44.1
2169 Male, age 76, both hemispheres 46.8
2453 Male, age 74, right hemisphere 46.8
2746 Female, age 85, left hemisphere 44.9
2320 Female, age 91, left hemisphere 41.1
2036 Male, age 80, both hemispheres 40.9
Lateral medullary reticular nucleus
nTPM: 43.4
2804 Female, age 91, both hemispheres 48.5
2852 Male, age 80, both hemispheres 46.8
2190 Female, age 85, both hemispheres 43.4
2374 Male, age 61, both hemispheres 43.1
2044 Male, age 76, both hemispheres 42.6
2305 Male, age 74, both hemispheres 36.1
Lateral parabrachial nucleus
nTPM: 43.1
2790 Male, age 61, both hemispheres 52.3
2139 Female, age 85, right hemisphere 46.7
2013 Male, age 80, both hemispheres 40.7
2792 Male, age 76, both hemispheres 32.9
Lateral vestibular nucleus
nTPM: 47.1
2184 Male, age 76, both hemispheres 49.3
2311 Male, age 80, both hemispheres 44.8
Locus coeruleus
nTPM: 46.2
1980 Male, age 76, both hemispheres 53.5
2014 Male, age 55, unknown 50.7
2317 Female, age 72, unknown 48.6
2123 Female, age 91, both hemispheres 48.1
2162 Male, age 80, both hemispheres 47.0
2720 Male, age 74, both hemispheres 41.5
2788 Male, age 74, unknown 34.0
Medial olivary nucleus
nTPM: 39.6
2138 Female, age 91, both hemispheres 46.5
1943 Male, age 61, both hemispheres 38.1
1962 Male, age 76, both hemispheres 37.5
2851 Male, age 80, both hemispheres 36.4
Medial parabrachial nucleus
nTPM: 43.3
2156 Male, age 61, both hemispheres 48.4
2463 Female, age 85, right hemisphere 46.0
2786 Male, age 76, both hemispheres 43.2
2170 Female, age 91, both hemispheres 42.4
2854 Male, age 80, both hemispheres 36.4
Medial periolivary nuclei
nTPM: 46.6
2063 Male, age 76, both hemispheres 55.5
2171 Female, age 85, both hemispheres 47.6
2081 Male, age 80, both hemispheres 44.9
2458 Female, age 91, both hemispheres 43.2
2791 Male, age 74, right hemisphere 42.0
Medial vestibular nucleus
nTPM: 44.6
2134 Male, age 76, both hemispheres 48.3
2093 Male, age 80, both hemispheres 47.8
2624 Male, age 61, both hemispheres 46.4
2743 Female, age 85, both hemispheres 45.8
2801 Male, age 74, both hemispheres 39.9
2803 Female, age 91, both hemispheres 39.4
Motor facial nucleus
nTPM: 47.4
2062 Male, age 76, both hemispheres 60.7
2795 Female, age 91, both hemispheres 53.6
2126 Male, age 61, both hemispheres 51.9
2327 Male, age 80, both hemispheres 42.8
2365 Male, age 74, right hemisphere 39.6
2697 Female, age 85, both hemispheres 35.9
Motor hypoglossal nucleus
nTPM: 45.2
2125 Female, age 91, both hemispheres 51.0
2132 Female, age 85, both hemispheres 48.4
2182 Male, age 80, both hemispheres 48.1
2277 Male, age 76, both hemispheres 46.4
2461 Male, age 61, both hemispheres 32.0
Motor trigeminal nucleus
nTPM: 45.3
2560 Male, age 74, both hemispheres 49.0
2079 Male, age 80, both hemispheres 45.9
2335 Male, age 61, both hemispheres 45.9
2321 Female, age 91, both hemispheres 43.2
2309 Male, age 76, both hemispheres 42.3
Nuclei of the trapezoid body
nTPM: 50.3
1983 Male, age 76, both hemispheres 55.2
2735 Female, age 85, both hemispheres 54.7
2368 Female, age 91, both hemispheres 49.7
2159 Male, age 61, both hemispheres 46.4
2166 Male, age 80, both hemispheres 45.7
Nucleus ambiguus
nTPM: 61.6
2096 Female, age 85, both hemispheres 76.3
2071 Male, age 76, both hemispheres 46.9
Nucleus cuneatus
nTPM: 49.8
2100 Male, age 76, both hemispheres 56.4
2564 Male, age 74, both hemispheres 56.1
2805 Female, age 91, both hemispheres 54.7
2562 Male, age 61, both hemispheres 52.8
2131 Male, age 76, both hemispheres 52.6
2376 Male, age 61, both hemispheres 49.0
2380 Male, age 80, both hemispheres 43.7
2381 Male, age 80, both hemispheres 42.9
2808 Female, age 85, both hemispheres 39.5
Nucleus gracilis
nTPM: 45.2
2299 Female, age 85, both hemispheres 49.9
2382 Male, age 80, both hemispheres 43.5
2627 Male, age 74, both hemispheres 42.1
Nucleus raphe magnus
nTPM: 46.7
2051 Male, age 76, both hemispheres 49.4
2172 Female, age 85, both hemispheres 48.9
2160 Male, age 61, both hemispheres 48.4
2455 Male, age 74, both hemispheres 45.4
2459 Female, age 91, both hemispheres 45.0
2328 Male, age 80, both hemispheres 43.1
Nucleus raphe obscurus
nTPM: 41.7
2800 Male, age 61, midline 44.3
2142 Male, age 76, midline 40.8
2845 Female, age 85, midline 39.9
Nucleus raphe pallidus
nTPM: 42.2
2145 Male, age 76, midline 42.5
2183 Male, age 80, midline 42.2
1924 Male, age 61, midline 42.0
Nucleus tractus solitarii
nTPM: 44.2
2307 Male, age 80, both hemispheres 48.6
2656 Male, age 76, both hemispheres 46.8
2191 Female, age 85, both hemispheres 45.7
2144 Female, age 91, right hemisphere 35.7
Paramedian reticular nucleus
nTPM: 41.5
2057 Male, age 80, both hemispheres 47.7
2313 Male, age 61, both hemispheres 44.2
2050 Female, age 85, both hemispheres 42.1
2052 Male, age 76, both hemispheres 32.0
Parvicellular reticular nuclei
nTPM: 45.4
2558 Male, age 74, both hemispheres 50.8
2119 Male, age 80, both hemispheres 44.1
2095 Male, age 76, both hemispheres 41.1
Parvicellular reticular nuclei, medullary
nTPM: 45.3
2091 Female, age 85, both hemispheres 48.6
2181 Male, age 80, left hemisphere 44.1
2189 Female, age 91, both hemispheres 43.3
Pedunculopontine tegmental nucleus
nTPM: 39.1
1921 Female, age 85, both hemispheres 42.6
2334 Male, age 80, both hemispheres 39.4
2338 Male, age 61, both hemispheres 35.2
Peritrigeminal nucleus
nTPM: 45.6
2067 Female, age 85, both hemispheres 48.3
2179 Male, age 61, both hemispheres 46.4
2136 Male, age 76, both hemispheres 42.1
Pontine nuclei
nTPM: 48.3
1968 Male, age 76, left hemisphere 56.6
2787 Female, age 85, both hemispheres 54.6
1863 Male, age 55, unknown 53.4
2109 Female, age 72, unknown 50.4
2727 Male, age 61, right hemisphere 47.1
2115 Male, age 80, left hemisphere 46.7
2454 Male, age 74, left hemisphere 39.2
2319 Female, age 91, both hemispheres 38.6
Pontine raphe nucleus
nTPM: 48.6
2122 Female, age 85, midline 49.0
2853 Male, age 76, midline 48.1
Posteroventral cochlear nucleus
nTPM: 42.5
2371 Male, age 61, both hemispheres 49.8
2752 Female, age 85, both hemispheres 48.5
2070 Male, age 76, both hemispheres 42.9
2341 Male, age 80, both hemispheres 36.2
2135 Female, age 91, both hemispheres 35.0
Prepositus hypoglossal nucleus
nTPM: 47.8
2086 Male, age 80, both hemispheres 51.3
2855 Female, age 85, right hemisphere 44.4
Principal sensory trigeminal nucleus
nTPM: 44.1
2158 Male, age 61, both hemispheres 52.6
2324 Male, age 76, both hemispheres 45.7
2008 Male, age 80, left hemisphere 43.0
2367 Female, age 91, left hemisphere 35.2
Reticular pontine nucleus, caudal
nTPM: 46.5
2457 Female, age 91, both hemispheres 47.7
2092 Male, age 76, both hemispheres 47.4
2332 Male, age 80, right hemisphere 46.8
2559 Male, age 74, both hemispheres 44.1
Reticular pontine nucleus, oral
nTPM: 42.0
2361 Male, age 74, both hemispheres 48.4
2012 Female, age 85, both hemispheres 43.1
2167 Male, age 76, both hemispheres 42.6
1939 Male, age 80, both hemispheres 39.6
2366 Female, age 91, both hemispheres 36.3
Reticulotegmental nucleus
nTPM: 46.0
2452 Male, age 74, both hemispheres 50.7
2325 Male, age 76, both hemispheres 45.4
2333 Male, age 80, both hemispheres 44.6
2322 Female, age 91, both hemispheres 43.3
Spinal trigeminal nucleus, caudal
nTPM: 46.6
2447 Male, age 76, both hemispheres 55.0
2390 Female, age 91, both hemispheres 46.4
2308 Male, age 80, both hemispheres 45.4
2642 Male, age 74, both hemispheres 44.9
2312 Male, age 61, both hemispheres 41.0
Spinal trigeminal nucleus, interpolar
nTPM: 45.2
2066 Male, age 76, right hemisphere 50.2
2625 Male, age 61, both hemispheres 44.6
2033 Male, age 80, both hemispheres 44.4
2389 Female, age 91, both hemispheres 43.8
2386 Female, age 85, both hemispheres 42.8
Spinal trigeminal nucleus, oral
nTPM: 45.0
1978 Male, age 76, both hemispheres 46.1
2164 Male, age 80, both hemispheres 45.8
2737 Female, age 85, both hemispheres 43.2
Spinal vestibular nucleus
nTPM: 46.7
2384 Male, age 74, both hemispheres 54.6
2748 Male, age 76, both hemispheres 47.5
2780 Male, age 80, both hemispheres 47.5
2186 Female, age 91, both hemispheres 46.9
2806 Female, age 85, both hemispheres 42.3
2796 Male, age 61, both hemispheres 41.8
Subcoeruleus area
nTPM: 45.3
2451 Male, age 74, both hemispheres 53.3
2089 Male, age 76, left hemisphere 51.6
2323 Female, age 91, left hemisphere 42.5
2369 Female, age 85, left hemisphere 40.6
1958 Male, age 80, both hemispheres 38.6
Superior olive
nTPM: 43.8
2020 Male, age 76, both hemispheres 47.5
2561 Female, age 91, both hemispheres 44.2
2329 Male, age 80, right hemisphere 43.5
1875 Female, age 85, both hemispheres 42.1
2364 Male, age 74, right hemisphere 41.6
Superior vestibular nucleus
nTPM: 42.4
2061 Male, age 76, both hemispheres 48.0
2015 Male, age 80, both hemispheres 45.1
2383 Male, age 74, both hemispheres 34.1
Ventral medullary reticular nucleus
nTPM: 50.8
2060 Male, age 76, both hemispheres 51.1
2372 Male, age 61, both hemispheres 50.4
Ventral periolivary nuclei
nTPM: 44.5
2130 Female, age 85, both hemispheres 47.5
2165 Male, age 80, both hemispheres 45.6
2023 Male, age 76, both hemispheres 43.5
2794 Female, age 91, left hemisphere 41.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 46.6
2118 Male, age 80, both hemispheres 49.7
2302 Female, age 91, both hemispheres 47.7
2741 Female, age 85, both hemispheres 46.6
2180 Male, age 61, both hemispheres 45.6
1986 Male, age 76, both hemispheres 43.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 43.6
2456 Female, age 91, both hemispheres 50.5
2161 Male, age 80, both hemispheres 46.9
1959 Male, age 76, both hemispheres 45.5
2449 Male, age 74, both hemispheres 43.2
2359 Male, age 61, both hemispheres 40.8
2840 Female, age 85, both hemispheres 34.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 24.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 24.2
FF:10165-103B3 76 years, female 27.8
FF:10182-103D2 60 years, female 20.7
Medulla oblongata
Scaled Tags Per Million: 21.2
FF:10038-101F2 18-64 years, mixed 22.1
FF:10174-103C3 60 years, female 20.8
FF:10155-103A2 76 years, female 20.8
Pons
Scaled Tags Per Million: 22.9
FF:10033-101E6 18-54 years, mixed 22.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 22.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 20.4
Samples: 4

Max nTPM: 23.4
Min nTPM: 17.8
Sample A Female 18.3
Sample B Female 22.0
Sample C Male 23.4
Sample D Male 17.8
Pons
nTPM: 22.8
Samples: 4

Max nTPM: 27.0
Min nTPM: 20.1
Sample A Female 27.0
Sample B Female 21.2
Sample C Male 22.9
Sample D Male 20.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 38.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 38.6
Samples: 4

Max nTPM: 38.8
Min nTPM: 38.3
Sample A Male 38.3
Sample B Male 38.7
Sample C Female 38.5
Sample D Female 38.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 2.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.1
69095969 Antisense, RP_050324_02_F06, Mouse strain C57BL/6J (56 days, male) 2.1
Pons
Expression energy: 1.5
69095969 Antisense, RP_050324_02_F06, Mouse strain C57BL/6J (56 days, male) 1.5

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