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NDUFA4
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:199.1 nTPM
FANTOM5:674.8 Scaled Tags Per Million
Pig:484.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA078265
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

199.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 199.1
Samples: 246

Max nTPM: 647.1
Min nTPM: 72.1
Std nTPM: 88.3
Median nTPM: 182.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 647.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 629.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 617.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 590.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 499.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 460.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 453.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 380.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 374.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 371.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 370.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 352.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 328.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 328.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 322.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 322.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 319.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 314.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 314.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 311.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 305.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 303.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 296.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 292.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 287.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 286.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 284.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 284.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 283.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 274.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 270.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 268.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 267.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 265.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 265.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 264.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 264.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 262.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 262.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 261.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 260.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 257.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 255.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 252.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 250.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 250.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 249.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 248.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 247.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 246.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 242.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 242.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 242.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 240.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 239.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 238.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 236.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 236.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 235.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 235.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 234.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 233.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 233.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 231.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 231.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 229.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 229.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 228.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 227.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 226.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 225.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 224.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 224.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 222.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 222.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 221.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 221.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 221.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 220.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 220.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 219.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 215.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 215.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 215.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 214.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 214.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 214.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 213.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 213.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 212.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 211.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 211.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 209.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 209.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 205.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 205.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 203.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 202.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 202.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 201.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 199.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 198.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 196.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 196.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 194.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 194.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 193.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 192.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 191.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 191.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 189.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 189.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 188.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 187.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 187.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 186.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 186.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 184.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 184.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 184.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 183.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 182.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 182.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 181.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 181.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 180.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 180.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 180.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 179.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 178.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 177.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 177.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 177.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 176.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 175.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 171.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 171.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 171.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 170.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 169.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 168.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 168.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 168.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 168.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 166.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 166.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 165.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 165.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 165.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 165.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 165.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 164.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 163.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 161.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 160.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 158.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 158.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 157.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 157.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 156.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 156.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 156.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 155.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 154.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 152.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 151.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 151.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 150.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 150.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 149.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 148.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 148.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 148.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 148.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 147.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 147.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 147.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 146.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 146.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 145.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 145.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 143.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 143.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 142.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 140.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 140.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 140.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 139.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 139.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 139.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 137.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 137.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 137.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 135.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 135.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 135.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 135.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 132.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 131.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 129.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 129.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 128.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 128.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 127.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 126.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 125.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 124.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 124.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 123.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 121.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 121.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 120.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 120.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 118.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 118.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 117.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 116.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 116.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 116.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 115.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 114.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 113.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 112.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 111.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 110.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 109.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 109.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 108.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 108.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 105.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 104.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 104.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 103.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 102.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 101.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 100.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 100.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 99.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 96.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 96.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 95.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 94.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 88.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 85.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 83.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 72.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

674.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 674.8
FF:10164-103B2 76 years, female 674.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

484.1
Pig sample Sample description nTPM
Caudate
nTPM: 484.2
Samples: 4

Max nTPM: 584.8
Min nTPM: 422.8
Sample A Female 422.8
Sample B Female 488.0
Sample C Male 584.8
Sample D Male 441.0

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