PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:436.8 nTPM
FANTOM5:164.3 Scaled Tags Per Million
Pig:41.0 nTPM
Mouse:62.0 nTPM
Allen mouse:3.5 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 436.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 332.7
2090 Male, age 80, both hemispheres 419.7
2188 Female, age 91, both hemispheres 388.5
2301 Female, age 85, both hemispheres 370.0
1984 Male, age 76, both hemispheres 152.6
Area postrema
nTPM: 230.7
2306 Male, age 80, both hemispheres 336.4
2799 Male, age 61, both hemispheres 188.9
2054 Male, age 76, both hemispheres 166.8
Dorsal cochlear nucleus
nTPM: 242.9
2187 Female, age 91, both hemispheres 287.4
2378 Male, age 80, both hemispheres 265.2
2802 Male, age 74, right hemisphere 246.2
2058 Male, age 76, both hemispheres 222.7
2370 Male, age 61, both hemispheres 193.2
Dorsal medullary reticular nucleus
nTPM: 303.9
2373 Male, age 61, both hemispheres 350.0
2088 Male, age 76, both hemispheres 300.5
2040 Female, age 85, both hemispheres 261.1
Dorsal motor vagal complex
nTPM: 177.5
2185 Male, age 76, both hemispheres 282.1
2000 Male, age 74, unknown 210.2
2807 Female, age 85, both hemispheres 185.3
2643 Male, age 74, both hemispheres 179.6
2133 Female, age 91, both hemispheres 163.7
2813 Female, age 72, unknown 141.2
2844 Male, age 55, unknown 132.6
2797 Male, age 61, both hemispheres 125.7
Dorsal tegmental nucleus
nTPM: 217.2
2083 Male, age 80, both hemispheres 286.3
2326 Male, age 74, both hemispheres 224.5
1936 Male, age 76, left hemisphere 215.6
2358 Male, age 61, both hemispheres 142.2
Dorsolateral tegmental area
nTPM: 257.6
2751 Female, age 85, both hemispheres 349.7
2337 Male, age 61, both hemispheres 341.9
2654 Male, age 80, both hemispheres 268.0
2360 Male, age 74, both hemispheres 182.5
2141 Male, age 76, both hemispheres 145.9
Gigantocellular reticular nuclei, medullary
nTPM: 286.2
2314 Male, age 61, both hemispheres 453.7
1876 Female, age 85, both hemispheres 333.9
2387 Female, age 91, both hemispheres 302.0
2310 Male, age 80, both hemispheres 248.8
2022 Male, age 76, right hemisphere 229.3
2462 Male, age 74, both hemispheres 149.5
Gigantocellular reticular nuclei, pars
nTPM: 268.8
2336 Male, age 61, both hemispheres 320.5
2706 Male, age 80, both hemispheres 293.4
2330 Male, age 80, both hemispheres 286.1
2084 Female, age 85, both hemispheres 261.7
2168 Male, age 76, both hemispheres 182.2
Inferior olive
nTPM: 321.8
2178 Male, age 61, both hemispheres 471.8
2379 Male, age 80, both hemispheres 293.7
2628 Female, age 91, both hemispheres 282.0
2563 Male, age 74, both hemispheres 281.5
2085 Female, age 85, both hemispheres 279.8
Kolliker-Fuse nucleus
nTPM: 265.2
2793 Female, age 91, left hemisphere 389.4
2163 Male, age 80, both hemispheres 247.6
2315 Male, age 76, right hemisphere 158.4
Lateral lemniscal nuclei
nTPM: 275.4
2320 Female, age 91, left hemisphere 352.7
2746 Female, age 85, left hemisphere 312.9
2036 Male, age 80, both hemispheres 285.6
2453 Male, age 74, right hemisphere 224.6
2169 Male, age 76, both hemispheres 201.3
Lateral medullary reticular nucleus
nTPM: 326.9
2852 Male, age 80, both hemispheres 437.3
2374 Male, age 61, both hemispheres 409.5
2305 Male, age 74, both hemispheres 341.9
2190 Female, age 85, both hemispheres 315.5
2044 Male, age 76, both hemispheres 253.7
2804 Female, age 91, both hemispheres 203.5
Lateral parabrachial nucleus
nTPM: 284.9
2792 Male, age 76, both hemispheres 398.1
2013 Male, age 80, both hemispheres 345.8
2790 Male, age 61, both hemispheres 202.0
2139 Female, age 85, right hemisphere 193.8
Lateral vestibular nucleus
nTPM: 255.9
2311 Male, age 80, both hemispheres 257.2
2184 Male, age 76, both hemispheres 254.7
Locus coeruleus
nTPM: 122.7
2162 Male, age 80, both hemispheres 161.2
2720 Male, age 74, both hemispheres 155.2
2317 Female, age 72, unknown 134.9
2123 Female, age 91, both hemispheres 111.9
2788 Male, age 74, unknown 104.1
2014 Male, age 55, unknown 103.8
1980 Male, age 76, both hemispheres 87.5
Medial olivary nucleus
nTPM: 417.4
1943 Male, age 61, both hemispheres 649.5
1962 Male, age 76, both hemispheres 394.6
2851 Male, age 80, both hemispheres 324.6
2138 Female, age 91, both hemispheres 300.8
Medial parabrachial nucleus
nTPM: 259.6
2463 Female, age 85, right hemisphere 302.5
2170 Female, age 91, both hemispheres 288.3
2854 Male, age 80, both hemispheres 263.3
2786 Male, age 76, both hemispheres 257.9
2156 Male, age 61, both hemispheres 186.1
Medial periolivary nuclei
nTPM: 267.2
2081 Male, age 80, both hemispheres 382.9
2458 Female, age 91, both hemispheres 331.9
2791 Male, age 74, right hemisphere 279.9
2171 Female, age 85, both hemispheres 172.6
2063 Male, age 76, both hemispheres 168.5
Medial vestibular nucleus
nTPM: 222.4
2093 Male, age 80, both hemispheres 272.0
2801 Male, age 74, both hemispheres 263.3
2803 Female, age 91, both hemispheres 253.2
2624 Male, age 61, both hemispheres 211.9
2743 Female, age 85, both hemispheres 200.2
2134 Male, age 76, both hemispheres 133.5
Motor facial nucleus
nTPM: 276.9
2126 Male, age 61, both hemispheres 436.7
2697 Female, age 85, both hemispheres 359.8
2365 Male, age 74, right hemisphere 278.4
2327 Male, age 80, both hemispheres 224.4
2795 Female, age 91, both hemispheres 215.2
2062 Male, age 76, both hemispheres 147.1
Motor hypoglossal nucleus
nTPM: 229.7
2182 Male, age 80, both hemispheres 318.3
2132 Female, age 85, both hemispheres 274.6
2125 Female, age 91, both hemispheres 272.9
2461 Male, age 61, both hemispheres 159.8
2277 Male, age 76, both hemispheres 123.2
Motor trigeminal nucleus
nTPM: 281.0
2321 Female, age 91, both hemispheres 322.7
2560 Male, age 74, both hemispheres 300.7
2309 Male, age 76, both hemispheres 300.4
2079 Male, age 80, both hemispheres 264.3
2335 Male, age 61, both hemispheres 216.8
Nuclei of the trapezoid body
nTPM: 234.1
2166 Male, age 80, both hemispheres 345.2
2159 Male, age 61, both hemispheres 268.4
2368 Female, age 91, both hemispheres 264.0
1983 Male, age 76, both hemispheres 164.1
2735 Female, age 85, both hemispheres 128.9
Nucleus ambiguus
nTPM: 336.6
2071 Male, age 76, both hemispheres 354.3
2096 Female, age 85, both hemispheres 318.8
Nucleus cuneatus
nTPM: 300.3
2380 Male, age 80, both hemispheres 392.7
2808 Female, age 85, both hemispheres 366.6
2100 Male, age 76, both hemispheres 349.6
2376 Male, age 61, both hemispheres 327.8
2381 Male, age 80, both hemispheres 325.8
2805 Female, age 91, both hemispheres 258.8
2131 Male, age 76, both hemispheres 251.9
2564 Male, age 74, both hemispheres 244.5
2562 Male, age 61, both hemispheres 184.8
Nucleus gracilis
nTPM: 328.8
2382 Male, age 80, both hemispheres 421.0
2627 Male, age 74, both hemispheres 282.8
2299 Female, age 85, both hemispheres 282.7
Nucleus raphe magnus
nTPM: 205.2
2459 Female, age 91, both hemispheres 299.7
2328 Male, age 80, both hemispheres 262.1
2051 Male, age 76, both hemispheres 240.7
2455 Male, age 74, both hemispheres 209.1
2160 Male, age 61, both hemispheres 112.8
2172 Female, age 85, both hemispheres 107.1
Nucleus raphe obscurus
nTPM: 436.8
2800 Male, age 61, midline 461.5
2142 Male, age 76, midline 430.3
2845 Female, age 85, midline 418.7
Nucleus raphe pallidus
nTPM: 377.5
1924 Male, age 61, midline 457.3
2145 Male, age 76, midline 392.3
2183 Male, age 80, midline 283.1
Nucleus tractus solitarii
nTPM: 127.5
2307 Male, age 80, both hemispheres 154.6
2656 Male, age 76, both hemispheres 138.4
2191 Female, age 85, both hemispheres 119.8
2144 Female, age 91, right hemisphere 97.2
Paramedian reticular nucleus
nTPM: 263.2
2052 Male, age 76, both hemispheres 332.9
2057 Male, age 80, both hemispheres 291.7
2050 Female, age 85, both hemispheres 243.8
2313 Male, age 61, both hemispheres 184.2
Parvicellular reticular nuclei
nTPM: 276.8
2095 Male, age 76, both hemispheres 296.8
2119 Male, age 80, both hemispheres 296.4
2558 Male, age 74, both hemispheres 237.1
Parvicellular reticular nuclei, medullary
nTPM: 219.8
2189 Female, age 91, both hemispheres 245.0
2091 Female, age 85, both hemispheres 228.8
2181 Male, age 80, left hemisphere 185.4
Pedunculopontine tegmental nucleus
nTPM: 224.6
2338 Male, age 61, both hemispheres 258.1
2334 Male, age 80, both hemispheres 223.7
1921 Female, age 85, both hemispheres 192.1
Peritrigeminal nucleus
nTPM: 283.0
2179 Male, age 61, both hemispheres 320.1
2067 Female, age 85, both hemispheres 271.9
2136 Male, age 76, both hemispheres 257.1
Pontine nuclei
nTPM: 299.5
2454 Male, age 74, left hemisphere 395.3
2115 Male, age 80, left hemisphere 393.2
2319 Female, age 91, both hemispheres 379.3
2109 Female, age 72, unknown 295.2
1968 Male, age 76, left hemisphere 290.8
1863 Male, age 55, unknown 240.5
2727 Male, age 61, right hemisphere 210.6
2787 Female, age 85, both hemispheres 191.2
Pontine raphe nucleus
nTPM: 169.4
2122 Female, age 85, midline 177.9
2853 Male, age 76, midline 160.8
Posteroventral cochlear nucleus
nTPM: 335.1
2135 Female, age 91, both hemispheres 502.8
2341 Male, age 80, both hemispheres 413.8
2070 Male, age 76, both hemispheres 312.0
2371 Male, age 61, both hemispheres 246.2
2752 Female, age 85, both hemispheres 200.7
Prepositus hypoglossal nucleus
nTPM: 225.3
2855 Female, age 85, right hemisphere 269.8
2086 Male, age 80, both hemispheres 180.9
Principal sensory trigeminal nucleus
nTPM: 251.5
2367 Female, age 91, left hemisphere 361.3
2324 Male, age 76, both hemispheres 238.8
2008 Male, age 80, left hemisphere 232.5
2158 Male, age 61, both hemispheres 173.6
Reticular pontine nucleus, caudal
nTPM: 290.5
2559 Male, age 74, both hemispheres 357.9
2457 Female, age 91, both hemispheres 308.6
2092 Male, age 76, both hemispheres 282.2
2332 Male, age 80, right hemisphere 213.4
Reticular pontine nucleus, oral
nTPM: 294.6
2366 Female, age 91, both hemispheres 376.7
1939 Male, age 80, both hemispheres 291.0
2012 Female, age 85, both hemispheres 273.8
2167 Male, age 76, both hemispheres 270.2
2361 Male, age 74, both hemispheres 261.0
Reticulotegmental nucleus
nTPM: 219.2
2452 Male, age 74, both hemispheres 249.5
2333 Male, age 80, both hemispheres 237.5
2322 Female, age 91, both hemispheres 235.2
2325 Male, age 76, both hemispheres 154.6
Spinal trigeminal nucleus, caudal
nTPM: 269.3
2312 Male, age 61, both hemispheres 397.9
2308 Male, age 80, both hemispheres 280.9
2447 Male, age 76, both hemispheres 236.3
2642 Male, age 74, both hemispheres 224.7
2390 Female, age 91, both hemispheres 206.7
Spinal trigeminal nucleus, interpolar
nTPM: 196.8
2033 Male, age 80, both hemispheres 235.4
2386 Female, age 85, both hemispheres 217.2
2389 Female, age 91, both hemispheres 205.3
2066 Male, age 76, right hemisphere 179.6
2625 Male, age 61, both hemispheres 146.4
Spinal trigeminal nucleus, oral
nTPM: 225.9
2164 Male, age 80, both hemispheres 277.4
1978 Male, age 76, both hemispheres 223.2
2737 Female, age 85, both hemispheres 177.2
Spinal vestibular nucleus
nTPM: 264.5
2748 Male, age 76, both hemispheres 351.2
2384 Male, age 74, both hemispheres 290.6
2806 Female, age 85, both hemispheres 277.8
2186 Female, age 91, both hemispheres 244.0
2780 Male, age 80, both hemispheres 242.3
2796 Male, age 61, both hemispheres 181.1
Subcoeruleus area
nTPM: 256.3
2369 Female, age 85, left hemisphere 415.1
2089 Male, age 76, left hemisphere 278.4
1958 Male, age 80, both hemispheres 216.3
2451 Male, age 74, both hemispheres 210.0
2323 Female, age 91, left hemisphere 161.8
Superior olive
nTPM: 297.5
2020 Male, age 76, both hemispheres 324.7
2329 Male, age 80, right hemisphere 320.5
2561 Female, age 91, both hemispheres 315.8
2364 Male, age 74, right hemisphere 272.6
1875 Female, age 85, both hemispheres 253.8
Superior vestibular nucleus
nTPM: 200.8
2015 Male, age 80, both hemispheres 219.6
2061 Male, age 76, both hemispheres 213.6
2383 Male, age 74, both hemispheres 169.2
Ventral medullary reticular nucleus
nTPM: 375.8
2372 Male, age 61, both hemispheres 421.6
2060 Male, age 76, both hemispheres 330.0
Ventral periolivary nuclei
nTPM: 254.8
2023 Male, age 76, both hemispheres 355.6
2794 Female, age 91, left hemisphere 263.1
2165 Male, age 80, both hemispheres 225.1
2130 Female, age 85, both hemispheres 175.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 286.5
2118 Male, age 80, both hemispheres 363.9
2180 Male, age 61, both hemispheres 362.5
1986 Male, age 76, both hemispheres 259.1
2741 Female, age 85, both hemispheres 233.9
2302 Female, age 91, both hemispheres 213.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 281.2
2456 Female, age 91, both hemispheres 347.3
2840 Female, age 85, both hemispheres 291.7
2359 Male, age 61, both hemispheres 285.4
1959 Male, age 76, both hemispheres 278.4
2161 Male, age 80, both hemispheres 254.6
2449 Male, age 74, both hemispheres 229.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 164.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 120.4
FF:10165-103B3 76 years, female 130.7
FF:10182-103D2 60 years, female 110.1
Medulla oblongata
Scaled Tags Per Million: 140.4
FF:10038-101F2 18-64 years, mixed 210.6
FF:10155-103A2 76 years, female 121.5
FF:10174-103C3 60 years, female 89.0
Pons
Scaled Tags Per Million: 164.3
FF:10033-101E6 18-54 years, mixed 164.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 41.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 41.0
Samples: 4

Max nTPM: 45.4
Min nTPM: 32.9
Sample A Female 45.4
Sample B Female 32.9
Sample C Male 44.1
Sample D Male 41.5
Pons
nTPM: 21.8
Samples: 4

Max nTPM: 30.3
Min nTPM: 16.6
Sample A Female 16.6
Sample B Female 21.6
Sample C Male 18.8
Sample D Male 30.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 62.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 62.0
Samples: 4

Max nTPM: 64.6
Min nTPM: 60.9
Sample A Male 64.6
Sample B Male 61.4
Sample C Female 60.9
Sample D Female 61.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.5
68637838 Antisense, RP_050126_01_G01, Mouse strain C57BL/6J (56 days, male) 3.5
Pons
Expression energy: 3.5
68637838 Antisense, RP_050126_01_G01, Mouse strain C57BL/6J (56 days, male) 3.5

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