PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:61.8 nTPM
FANTOM5:204.5 Scaled Tags Per Million
Pig:39.1 nTPM
Mouse:46.8 nTPM
Allen mouse:9.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 61.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 53.3
2301 Female, age 85, both hemispheres 57.7
2090 Male, age 80, both hemispheres 54.9
2188 Female, age 91, both hemispheres 53.6
1984 Male, age 76, both hemispheres 46.9
Area postrema
nTPM: 55.2
2306 Male, age 80, both hemispheres 61.0
2799 Male, age 61, both hemispheres 59.6
2054 Male, age 76, both hemispheres 45.1
Dorsal cochlear nucleus
nTPM: 54.4
2802 Male, age 74, right hemisphere 56.9
2058 Male, age 76, both hemispheres 55.4
2187 Female, age 91, both hemispheres 54.9
2378 Male, age 80, both hemispheres 52.6
2370 Male, age 61, both hemispheres 51.9
Dorsal medullary reticular nucleus
nTPM: 51.1
2373 Male, age 61, both hemispheres 54.3
2088 Male, age 76, both hemispheres 50.2
2040 Female, age 85, both hemispheres 48.7
Dorsal motor vagal complex
nTPM: 58.0
2813 Female, age 72, unknown 67.8
2643 Male, age 74, both hemispheres 62.5
2844 Male, age 55, unknown 60.1
2797 Male, age 61, both hemispheres 59.9
2133 Female, age 91, both hemispheres 55.6
2807 Female, age 85, both hemispheres 54.2
2185 Male, age 76, both hemispheres 53.0
2000 Male, age 74, unknown 50.8
Dorsal tegmental nucleus
nTPM: 61.8
2358 Male, age 61, both hemispheres 88.8
2083 Male, age 80, both hemispheres 60.9
2326 Male, age 74, both hemispheres 50.3
1936 Male, age 76, left hemisphere 47.1
Dorsolateral tegmental area
nTPM: 52.1
2141 Male, age 76, both hemispheres 56.3
2654 Male, age 80, both hemispheres 54.8
2337 Male, age 61, both hemispheres 52.9
2751 Female, age 85, both hemispheres 51.7
2360 Male, age 74, both hemispheres 45.0
Gigantocellular reticular nuclei, medullary
nTPM: 52.3
2314 Male, age 61, both hemispheres 57.0
2310 Male, age 80, both hemispheres 55.3
2387 Female, age 91, both hemispheres 51.8
2462 Male, age 74, both hemispheres 51.4
1876 Female, age 85, both hemispheres 50.5
2022 Male, age 76, right hemisphere 48.1
Gigantocellular reticular nuclei, pars
nTPM: 55.3
2168 Male, age 76, both hemispheres 57.5
2330 Male, age 80, both hemispheres 56.1
2084 Female, age 85, both hemispheres 55.7
2336 Male, age 61, both hemispheres 53.7
2706 Male, age 80, both hemispheres 53.6
Inferior olive
nTPM: 56.9
2628 Female, age 91, both hemispheres 73.4
2178 Male, age 61, both hemispheres 56.3
2085 Female, age 85, both hemispheres 53.7
2563 Male, age 74, both hemispheres 51.0
2379 Male, age 80, both hemispheres 50.1
Kolliker-Fuse nucleus
nTPM: 57.2
2793 Female, age 91, left hemisphere 63.4
2163 Male, age 80, both hemispheres 56.2
2315 Male, age 76, right hemisphere 52.0
Lateral lemniscal nuclei
nTPM: 52.2
2169 Male, age 76, both hemispheres 59.8
2746 Female, age 85, left hemisphere 57.3
2453 Male, age 74, right hemisphere 56.6
2320 Female, age 91, left hemisphere 50.5
2036 Male, age 80, both hemispheres 36.9
Lateral medullary reticular nucleus
nTPM: 54.8
2374 Male, age 61, both hemispheres 67.7
2852 Male, age 80, both hemispheres 56.0
2804 Female, age 91, both hemispheres 54.4
2190 Female, age 85, both hemispheres 54.2
2044 Male, age 76, both hemispheres 50.2
2305 Male, age 74, both hemispheres 46.7
Lateral parabrachial nucleus
nTPM: 51.4
2139 Female, age 85, right hemisphere 59.3
2013 Male, age 80, both hemispheres 53.0
2792 Male, age 76, both hemispheres 47.7
2790 Male, age 61, both hemispheres 45.7
Lateral vestibular nucleus
nTPM: 54.4
2311 Male, age 80, both hemispheres 55.6
2184 Male, age 76, both hemispheres 53.2
Locus coeruleus
nTPM: 57.5
2720 Male, age 74, both hemispheres 67.3
2123 Female, age 91, both hemispheres 59.7
2014 Male, age 55, unknown 58.1
1980 Male, age 76, both hemispheres 57.0
2162 Male, age 80, both hemispheres 55.3
2317 Female, age 72, unknown 53.4
2788 Male, age 74, unknown 52.0
Medial olivary nucleus
nTPM: 55.3
2851 Male, age 80, both hemispheres 60.4
2138 Female, age 91, both hemispheres 56.3
1943 Male, age 61, both hemispheres 56.1
1962 Male, age 76, both hemispheres 48.5
Medial parabrachial nucleus
nTPM: 53.4
2170 Female, age 91, both hemispheres 57.9
2854 Male, age 80, both hemispheres 55.4
2786 Male, age 76, both hemispheres 53.2
2156 Male, age 61, both hemispheres 51.3
2463 Female, age 85, right hemisphere 49.3
Medial periolivary nuclei
nTPM: 54.3
2063 Male, age 76, both hemispheres 64.8
2171 Female, age 85, both hemispheres 58.3
2081 Male, age 80, both hemispheres 53.7
2458 Female, age 91, both hemispheres 52.6
2791 Male, age 74, right hemisphere 42.1
Medial vestibular nucleus
nTPM: 54.8
2624 Male, age 61, both hemispheres 62.6
2803 Female, age 91, both hemispheres 59.0
2134 Male, age 76, both hemispheres 53.7
2093 Male, age 80, both hemispheres 52.9
2801 Male, age 74, both hemispheres 52.1
2743 Female, age 85, both hemispheres 48.5
Motor facial nucleus
nTPM: 58.5
2697 Female, age 85, both hemispheres 70.2
2062 Male, age 76, both hemispheres 62.1
2795 Female, age 91, both hemispheres 59.1
2327 Male, age 80, both hemispheres 56.8
2365 Male, age 74, right hemisphere 52.9
2126 Male, age 61, both hemispheres 49.7
Motor hypoglossal nucleus
nTPM: 60.8
2461 Male, age 61, both hemispheres 88.8
2182 Male, age 80, both hemispheres 58.5
2132 Female, age 85, both hemispheres 56.8
2125 Female, age 91, both hemispheres 55.8
2277 Male, age 76, both hemispheres 44.2
Motor trigeminal nucleus
nTPM: 53.3
2321 Female, age 91, both hemispheres 55.1
2335 Male, age 61, both hemispheres 54.4
2079 Male, age 80, both hemispheres 52.8
2560 Male, age 74, both hemispheres 52.5
2309 Male, age 76, both hemispheres 51.8
Nuclei of the trapezoid body
nTPM: 56.3
1983 Male, age 76, both hemispheres 68.2
2735 Female, age 85, both hemispheres 55.8
2166 Male, age 80, both hemispheres 54.3
2159 Male, age 61, both hemispheres 52.5
2368 Female, age 91, both hemispheres 50.6
Nucleus ambiguus
nTPM: 57.2
2096 Female, age 85, both hemispheres 65.8
2071 Male, age 76, both hemispheres 48.6
Nucleus cuneatus
nTPM: 54.1
2805 Female, age 91, both hemispheres 64.5
2381 Male, age 80, both hemispheres 55.3
2564 Male, age 74, both hemispheres 55.3
2808 Female, age 85, both hemispheres 54.4
2562 Male, age 61, both hemispheres 53.9
2100 Male, age 76, both hemispheres 52.5
2376 Male, age 61, both hemispheres 52.5
2380 Male, age 80, both hemispheres 50.1
2131 Male, age 76, both hemispheres 48.5
Nucleus gracilis
nTPM: 60.1
2627 Male, age 74, both hemispheres 61.5
2382 Male, age 80, both hemispheres 60.8
2299 Female, age 85, both hemispheres 58.0
Nucleus raphe magnus
nTPM: 57.1
2172 Female, age 85, both hemispheres 67.0
2160 Male, age 61, both hemispheres 58.5
2328 Male, age 80, both hemispheres 56.5
2459 Female, age 91, both hemispheres 53.9
2051 Male, age 76, both hemispheres 53.7
2455 Male, age 74, both hemispheres 53.0
Nucleus raphe obscurus
nTPM: 50.6
2845 Female, age 85, midline 56.1
2800 Male, age 61, midline 50.8
2142 Male, age 76, midline 44.9
Nucleus raphe pallidus
nTPM: 50.8
1924 Male, age 61, midline 55.5
2183 Male, age 80, midline 50.5
2145 Male, age 76, midline 46.3
Nucleus tractus solitarii
nTPM: 47.0
2307 Male, age 80, both hemispheres 53.8
2656 Male, age 76, both hemispheres 50.8
2191 Female, age 85, both hemispheres 49.7
2144 Female, age 91, right hemisphere 33.9
Paramedian reticular nucleus
nTPM: 47.7
2050 Female, age 85, both hemispheres 52.4
2057 Male, age 80, both hemispheres 51.0
2313 Male, age 61, both hemispheres 50.5
2052 Male, age 76, both hemispheres 37.0
Parvicellular reticular nuclei
nTPM: 51.9
2558 Male, age 74, both hemispheres 53.0
2095 Male, age 76, both hemispheres 52.4
2119 Male, age 80, both hemispheres 50.4
Parvicellular reticular nuclei, medullary
nTPM: 56.7
2189 Female, age 91, both hemispheres 59.6
2181 Male, age 80, left hemisphere 57.8
2091 Female, age 85, both hemispheres 52.6
Pedunculopontine tegmental nucleus
nTPM: 54.8
2338 Male, age 61, both hemispheres 57.8
2334 Male, age 80, both hemispheres 57.2
1921 Female, age 85, both hemispheres 49.4
Peritrigeminal nucleus
nTPM: 53.1
2136 Male, age 76, both hemispheres 55.5
2067 Female, age 85, both hemispheres 54.6
2179 Male, age 61, both hemispheres 49.2
Pontine nuclei
nTPM: 57.9
2787 Female, age 85, both hemispheres 78.2
1863 Male, age 55, unknown 66.9
1968 Male, age 76, left hemisphere 61.0
2115 Male, age 80, left hemisphere 54.8
2727 Male, age 61, right hemisphere 53.5
2319 Female, age 91, both hemispheres 53.2
2109 Female, age 72, unknown 50.9
2454 Male, age 74, left hemisphere 44.6
Pontine raphe nucleus
nTPM: 56.1
2122 Female, age 85, midline 56.9
2853 Male, age 76, midline 55.3
Posteroventral cochlear nucleus
nTPM: 52.9
2135 Female, age 91, both hemispheres 57.3
2371 Male, age 61, both hemispheres 53.1
2070 Male, age 76, both hemispheres 52.0
2341 Male, age 80, both hemispheres 51.7
2752 Female, age 85, both hemispheres 50.3
Prepositus hypoglossal nucleus
nTPM: 52.6
2855 Female, age 85, right hemisphere 52.7
2086 Male, age 80, both hemispheres 52.6
Principal sensory trigeminal nucleus
nTPM: 51.8
2158 Male, age 61, both hemispheres 55.7
2367 Female, age 91, left hemisphere 54.7
2324 Male, age 76, both hemispheres 52.4
2008 Male, age 80, left hemisphere 44.5
Reticular pontine nucleus, caudal
nTPM: 54.9
2092 Male, age 76, both hemispheres 59.3
2332 Male, age 80, right hemisphere 56.0
2457 Female, age 91, both hemispheres 53.8
2559 Male, age 74, both hemispheres 50.5
Reticular pontine nucleus, oral
nTPM: 53.8
2366 Female, age 91, both hemispheres 60.6
2167 Male, age 76, both hemispheres 55.6
1939 Male, age 80, both hemispheres 52.6
2012 Female, age 85, both hemispheres 50.8
2361 Male, age 74, both hemispheres 49.2
Reticulotegmental nucleus
nTPM: 57.7
2322 Female, age 91, both hemispheres 60.0
2452 Male, age 74, both hemispheres 57.1
2333 Male, age 80, both hemispheres 57.0
2325 Male, age 76, both hemispheres 56.7
Spinal trigeminal nucleus, caudal
nTPM: 55.9
2642 Male, age 74, both hemispheres 65.6
2390 Female, age 91, both hemispheres 55.8
2308 Male, age 80, both hemispheres 55.3
2312 Male, age 61, both hemispheres 51.5
2447 Male, age 76, both hemispheres 51.2
Spinal trigeminal nucleus, interpolar
nTPM: 55.4
2625 Male, age 61, both hemispheres 63.8
2066 Male, age 76, right hemisphere 58.1
2389 Female, age 91, both hemispheres 56.1
2033 Male, age 80, both hemispheres 51.3
2386 Female, age 85, both hemispheres 47.8
Spinal trigeminal nucleus, oral
nTPM: 51.2
2164 Male, age 80, both hemispheres 54.6
1978 Male, age 76, both hemispheres 50.0
2737 Female, age 85, both hemispheres 48.9
Spinal vestibular nucleus
nTPM: 54.8
2796 Male, age 61, both hemispheres 59.8
2780 Male, age 80, both hemispheres 56.0
2384 Male, age 74, both hemispheres 55.3
2186 Female, age 91, both hemispheres 53.9
2748 Male, age 76, both hemispheres 52.3
2806 Female, age 85, both hemispheres 51.8
Subcoeruleus area
nTPM: 54.3
2323 Female, age 91, left hemisphere 58.1
2451 Male, age 74, both hemispheres 55.2
2089 Male, age 76, left hemisphere 53.4
1958 Male, age 80, both hemispheres 52.7
2369 Female, age 85, left hemisphere 52.0
Superior olive
nTPM: 51.4
1875 Female, age 85, both hemispheres 55.2
2561 Female, age 91, both hemispheres 53.5
2329 Male, age 80, right hemisphere 53.2
2020 Male, age 76, both hemispheres 50.0
2364 Male, age 74, right hemisphere 45.0
Superior vestibular nucleus
nTPM: 48.5
2061 Male, age 76, both hemispheres 50.6
2015 Male, age 80, both hemispheres 50.2
2383 Male, age 74, both hemispheres 44.7
Ventral medullary reticular nucleus
nTPM: 54.2
2060 Male, age 76, both hemispheres 55.1
2372 Male, age 61, both hemispheres 53.3
Ventral periolivary nuclei
nTPM: 53.3
2130 Female, age 85, both hemispheres 58.4
2165 Male, age 80, both hemispheres 54.7
2794 Female, age 91, left hemisphere 51.4
2023 Male, age 76, both hemispheres 48.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 53.2
2180 Male, age 61, both hemispheres 56.8
2302 Female, age 91, both hemispheres 54.8
2118 Male, age 80, both hemispheres 53.6
1986 Male, age 76, both hemispheres 51.0
2741 Female, age 85, both hemispheres 49.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 54.9
2840 Female, age 85, both hemispheres 62.6
2161 Male, age 80, both hemispheres 54.6
2449 Male, age 74, both hemispheres 54.3
1959 Male, age 76, both hemispheres 53.6
2456 Female, age 91, both hemispheres 53.6
2359 Male, age 61, both hemispheres 50.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 204.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 204.5
FF:10182-103D2 60 years, female 228.7
FF:10165-103B3 76 years, female 180.4
Medulla oblongata
Scaled Tags Per Million: 163.7
FF:10038-101F2 18-64 years, mixed 201.6
FF:10155-103A2 76 years, female 163.8
FF:10174-103C3 60 years, female 125.7
Pons
Scaled Tags Per Million: 173.1
FF:10033-101E6 18-54 years, mixed 173.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 39.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 32.6
Samples: 4

Max nTPM: 35.8
Min nTPM: 29.2
Sample A Female 33.3
Sample B Female 32.2
Sample C Male 35.8
Sample D Male 29.2
Pons
nTPM: 39.1
Samples: 4

Max nTPM: 49.7
Min nTPM: 33.4
Sample A Female 49.7
Sample B Female 33.4
Sample C Male 34.7
Sample D Male 38.6

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 46.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 46.8
Samples: 4

Max nTPM: 50.0
Min nTPM: 43.7
Sample A Male 46.7
Sample B Male 50.0
Sample C Female 46.6
Sample D Female 43.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 9.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 9.2
2647 Antisense, RP_040407_02_B10, Mouse strain C57BL/6J (56 days, male) 9.2
2648 Antisense, RP_040407_02_B10, Mouse strain C57BL/6J (56 days, male) 2.9
Pons
Expression energy: 8.6
2647 Antisense, RP_040407_02_B10, Mouse strain C57BL/6J (56 days, male) 8.6
2648 Antisense, RP_040407_02_B10, Mouse strain C57BL/6J (56 days, male) 2.8

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