PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:129.2 nTPM
FANTOM5:144.2 Scaled Tags Per Million
Pig:46.4 nTPM
Mouse:24.0 nTPM
Allen mouse:3.3 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 129.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 120.9
2301 Female, age 85, both hemispheres 145.3
2188 Female, age 91, both hemispheres 128.8
2090 Male, age 80, both hemispheres 123.7
1984 Male, age 76, both hemispheres 85.7
Area postrema
nTPM: 80.6
2306 Male, age 80, both hemispheres 114.2
2799 Male, age 61, both hemispheres 66.7
2054 Male, age 76, both hemispheres 60.9
Dorsal cochlear nucleus
nTPM: 98.2
2187 Female, age 91, both hemispheres 116.4
2058 Male, age 76, both hemispheres 97.1
2802 Male, age 74, right hemisphere 96.8
2378 Male, age 80, both hemispheres 95.4
2370 Male, age 61, both hemispheres 85.3
Dorsal medullary reticular nucleus
nTPM: 108.4
2373 Male, age 61, both hemispheres 113.1
2088 Male, age 76, both hemispheres 110.4
2040 Female, age 85, both hemispheres 101.7
Dorsal motor vagal complex
nTPM: 88.5
2185 Male, age 76, both hemispheres 129.5
2643 Male, age 74, both hemispheres 94.9
2000 Male, age 74, unknown 88.5
2133 Female, age 91, both hemispheres 86.9
2844 Male, age 55, unknown 79.7
2813 Female, age 72, unknown 78.6
2807 Female, age 85, both hemispheres 76.6
2797 Male, age 61, both hemispheres 73.2
Dorsal tegmental nucleus
nTPM: 100.7
2083 Male, age 80, both hemispheres 119.7
2326 Male, age 74, both hemispheres 107.2
1936 Male, age 76, left hemisphere 89.6
2358 Male, age 61, both hemispheres 86.2
Dorsolateral tegmental area
nTPM: 93.9
2751 Female, age 85, both hemispheres 123.6
2654 Male, age 80, both hemispheres 109.8
2337 Male, age 61, both hemispheres 86.5
2141 Male, age 76, both hemispheres 76.1
2360 Male, age 74, both hemispheres 73.7
Gigantocellular reticular nuclei, medullary
nTPM: 109.8
2314 Male, age 61, both hemispheres 127.1
2310 Male, age 80, both hemispheres 116.6
1876 Female, age 85, both hemispheres 116.4
2387 Female, age 91, both hemispheres 110.4
2462 Male, age 74, both hemispheres 96.4
2022 Male, age 76, right hemisphere 92.1
Gigantocellular reticular nuclei, pars
nTPM: 114.9
2336 Male, age 61, both hemispheres 120.2
2168 Male, age 76, both hemispheres 118.5
2330 Male, age 80, both hemispheres 115.0
2706 Male, age 80, both hemispheres 111.5
2084 Female, age 85, both hemispheres 109.2
Inferior olive
nTPM: 102.2
2178 Male, age 61, both hemispheres 124.3
2628 Female, age 91, both hemispheres 113.5
2563 Male, age 74, both hemispheres 98.2
2085 Female, age 85, both hemispheres 98.1
2379 Male, age 80, both hemispheres 77.0
Kolliker-Fuse nucleus
nTPM: 102.6
2793 Female, age 91, left hemisphere 139.6
2163 Male, age 80, both hemispheres 99.5
2315 Male, age 76, right hemisphere 68.7
Lateral lemniscal nuclei
nTPM: 128.9
2320 Female, age 91, left hemisphere 145.3
2036 Male, age 80, both hemispheres 136.1
2453 Male, age 74, right hemisphere 127.9
2746 Female, age 85, left hemisphere 118.0
2169 Male, age 76, both hemispheres 117.3
Lateral medullary reticular nucleus
nTPM: 108.7
2852 Male, age 80, both hemispheres 124.6
2305 Male, age 74, both hemispheres 124.3
2374 Male, age 61, both hemispheres 116.6
2190 Female, age 85, both hemispheres 104.5
2044 Male, age 76, both hemispheres 96.9
2804 Female, age 91, both hemispheres 85.3
Lateral parabrachial nucleus
nTPM: 104.1
2013 Male, age 80, both hemispheres 111.4
2139 Female, age 85, right hemisphere 109.1
2792 Male, age 76, both hemispheres 102.3
2790 Male, age 61, both hemispheres 93.6
Lateral vestibular nucleus
nTPM: 103.0
2184 Male, age 76, both hemispheres 103.0
2311 Male, age 80, both hemispheres 102.9
Locus coeruleus
nTPM: 74.2
2162 Male, age 80, both hemispheres 89.8
2720 Male, age 74, both hemispheres 86.8
2317 Female, age 72, unknown 76.2
2123 Female, age 91, both hemispheres 70.5
2014 Male, age 55, unknown 68.5
1980 Male, age 76, both hemispheres 64.9
2788 Male, age 74, unknown 62.9
Medial olivary nucleus
nTPM: 112.0
1943 Male, age 61, both hemispheres 114.7
2851 Male, age 80, both hemispheres 113.0
1962 Male, age 76, both hemispheres 110.6
2138 Female, age 91, both hemispheres 109.6
Medial parabrachial nucleus
nTPM: 114.5
2170 Female, age 91, both hemispheres 133.4
2463 Female, age 85, right hemisphere 115.4
2854 Male, age 80, both hemispheres 112.9
2156 Male, age 61, both hemispheres 106.9
2786 Male, age 76, both hemispheres 104.0
Medial periolivary nuclei
nTPM: 118.2
2458 Female, age 91, both hemispheres 135.0
2081 Male, age 80, both hemispheres 134.3
2171 Female, age 85, both hemispheres 112.7
2791 Male, age 74, right hemisphere 108.8
2063 Male, age 76, both hemispheres 100.3
Medial vestibular nucleus
nTPM: 100.5
2801 Male, age 74, both hemispheres 130.0
2624 Male, age 61, both hemispheres 105.7
2093 Male, age 80, both hemispheres 105.5
2803 Female, age 91, both hemispheres 102.3
2743 Female, age 85, both hemispheres 90.2
2134 Male, age 76, both hemispheres 69.6
Motor facial nucleus
nTPM: 117.2
2365 Male, age 74, right hemisphere 131.5
2126 Male, age 61, both hemispheres 124.9
2697 Female, age 85, both hemispheres 122.2
2327 Male, age 80, both hemispheres 118.5
2062 Male, age 76, both hemispheres 108.1
2795 Female, age 91, both hemispheres 98.2
Motor hypoglossal nucleus
nTPM: 102.5
2182 Male, age 80, both hemispheres 132.8
2125 Female, age 91, both hemispheres 124.4
2132 Female, age 85, both hemispheres 111.4
2461 Male, age 61, both hemispheres 82.6
2277 Male, age 76, both hemispheres 61.6
Motor trigeminal nucleus
nTPM: 117.9
2321 Female, age 91, both hemispheres 137.1
2560 Male, age 74, both hemispheres 130.8
2079 Male, age 80, both hemispheres 117.5
2335 Male, age 61, both hemispheres 107.4
2309 Male, age 76, both hemispheres 97.0
Nuclei of the trapezoid body
nTPM: 111.7
2159 Male, age 61, both hemispheres 129.1
2166 Male, age 80, both hemispheres 124.9
2368 Female, age 91, both hemispheres 105.9
2735 Female, age 85, both hemispheres 102.6
1983 Male, age 76, both hemispheres 96.1
Nucleus ambiguus
nTPM: 128.4
2096 Female, age 85, both hemispheres 133.7
2071 Male, age 76, both hemispheres 123.2
Nucleus cuneatus
nTPM: 102.2
2100 Male, age 76, both hemispheres 128.0
2131 Male, age 76, both hemispheres 111.9
2380 Male, age 80, both hemispheres 108.4
2381 Male, age 80, both hemispheres 105.2
2808 Female, age 85, both hemispheres 103.6
2564 Male, age 74, both hemispheres 97.3
2376 Male, age 61, both hemispheres 95.7
2805 Female, age 91, both hemispheres 85.0
2562 Male, age 61, both hemispheres 84.7
Nucleus gracilis
nTPM: 111.7
2382 Male, age 80, both hemispheres 123.3
2627 Male, age 74, both hemispheres 117.3
2299 Female, age 85, both hemispheres 94.5
Nucleus raphe magnus
nTPM: 117.7
2459 Female, age 91, both hemispheres 130.9
2328 Male, age 80, both hemispheres 121.3
2455 Male, age 74, both hemispheres 118.4
2172 Female, age 85, both hemispheres 115.1
2160 Male, age 61, both hemispheres 111.3
2051 Male, age 76, both hemispheres 109.3
Nucleus raphe obscurus
nTPM: 122.3
2845 Female, age 85, midline 134.2
2142 Male, age 76, midline 116.4
2800 Male, age 61, midline 116.2
Nucleus raphe pallidus
nTPM: 116.6
2145 Male, age 76, midline 132.8
2183 Male, age 80, midline 121.2
1924 Male, age 61, midline 95.7
Nucleus tractus solitarii
nTPM: 67.5
2307 Male, age 80, both hemispheres 78.4
2656 Male, age 76, both hemispheres 78.1
2191 Female, age 85, both hemispheres 58.4
2144 Female, age 91, right hemisphere 55.2
Paramedian reticular nucleus
nTPM: 93.5
2057 Male, age 80, both hemispheres 105.7
2050 Female, age 85, both hemispheres 98.0
2313 Male, age 61, both hemispheres 86.0
2052 Male, age 76, both hemispheres 84.1
Parvicellular reticular nuclei
nTPM: 116.9
2095 Male, age 76, both hemispheres 119.4
2558 Male, age 74, both hemispheres 117.3
2119 Male, age 80, both hemispheres 114.1
Parvicellular reticular nuclei, medullary
nTPM: 103.6
2189 Female, age 91, both hemispheres 120.8
2181 Male, age 80, left hemisphere 97.5
2091 Female, age 85, both hemispheres 92.5
Pedunculopontine tegmental nucleus
nTPM: 90.9
2334 Male, age 80, both hemispheres 97.0
2338 Male, age 61, both hemispheres 90.5
1921 Female, age 85, both hemispheres 85.1
Peritrigeminal nucleus
nTPM: 104.4
2179 Male, age 61, both hemispheres 114.0
2067 Female, age 85, both hemispheres 101.9
2136 Male, age 76, both hemispheres 97.3
Pontine nuclei
nTPM: 129.2
2454 Male, age 74, left hemisphere 168.5
2319 Female, age 91, both hemispheres 140.1
2109 Female, age 72, unknown 138.0
1968 Male, age 76, left hemisphere 126.3
2787 Female, age 85, both hemispheres 125.4
1863 Male, age 55, unknown 123.2
2115 Male, age 80, left hemisphere 118.2
2727 Male, age 61, right hemisphere 94.3
Pontine raphe nucleus
nTPM: 93.5
2122 Female, age 85, midline 104.8
2853 Male, age 76, midline 82.1
Posteroventral cochlear nucleus
nTPM: 108.5
2135 Female, age 91, both hemispheres 136.3
2070 Male, age 76, both hemispheres 121.8
2341 Male, age 80, both hemispheres 110.6
2752 Female, age 85, both hemispheres 92.6
2371 Male, age 61, both hemispheres 81.1
Prepositus hypoglossal nucleus
nTPM: 89.1
2855 Female, age 85, right hemisphere 100.3
2086 Male, age 80, both hemispheres 78.0
Principal sensory trigeminal nucleus
nTPM: 113.7
2367 Female, age 91, left hemisphere 136.5
2158 Male, age 61, both hemispheres 116.9
2008 Male, age 80, left hemisphere 105.3
2324 Male, age 76, both hemispheres 96.3
Reticular pontine nucleus, caudal
nTPM: 128.1
2559 Male, age 74, both hemispheres 144.1
2457 Female, age 91, both hemispheres 130.4
2332 Male, age 80, right hemisphere 124.9
2092 Male, age 76, both hemispheres 113.0
Reticular pontine nucleus, oral
nTPM: 126.0
2361 Male, age 74, both hemispheres 154.3
2366 Female, age 91, both hemispheres 143.0
2012 Female, age 85, both hemispheres 118.4
1939 Male, age 80, both hemispheres 108.6
2167 Male, age 76, both hemispheres 105.9
Reticulotegmental nucleus
nTPM: 106.8
2452 Male, age 74, both hemispheres 124.4
2322 Female, age 91, both hemispheres 117.0
2333 Male, age 80, both hemispheres 106.5
2325 Male, age 76, both hemispheres 79.2
Spinal trigeminal nucleus, caudal
nTPM: 108.3
2312 Male, age 61, both hemispheres 124.2
2308 Male, age 80, both hemispheres 110.7
2642 Male, age 74, both hemispheres 105.1
2447 Male, age 76, both hemispheres 104.3
2390 Female, age 91, both hemispheres 97.1
Spinal trigeminal nucleus, interpolar
nTPM: 91.8
2389 Female, age 91, both hemispheres 105.3
2066 Male, age 76, right hemisphere 92.8
2033 Male, age 80, both hemispheres 88.7
2625 Male, age 61, both hemispheres 88.0
2386 Female, age 85, both hemispheres 84.4
Spinal trigeminal nucleus, oral
nTPM: 106.7
2164 Male, age 80, both hemispheres 118.6
1978 Male, age 76, both hemispheres 117.2
2737 Female, age 85, both hemispheres 84.2
Spinal vestibular nucleus
nTPM: 108.2
2748 Male, age 76, both hemispheres 128.3
2384 Male, age 74, both hemispheres 115.2
2186 Female, age 91, both hemispheres 112.1
2780 Male, age 80, both hemispheres 103.3
2806 Female, age 85, both hemispheres 103.0
2796 Male, age 61, both hemispheres 87.3
Subcoeruleus area
nTPM: 109.4
2369 Female, age 85, left hemisphere 136.9
2089 Male, age 76, left hemisphere 126.6
2323 Female, age 91, left hemisphere 96.0
1958 Male, age 80, both hemispheres 94.2
2451 Male, age 74, both hemispheres 93.2
Superior olive
nTPM: 117.1
2329 Male, age 80, right hemisphere 134.6
2020 Male, age 76, both hemispheres 118.5
2364 Male, age 74, right hemisphere 113.5
2561 Female, age 91, both hemispheres 109.6
1875 Female, age 85, both hemispheres 109.3
Superior vestibular nucleus
nTPM: 80.8
2061 Male, age 76, both hemispheres 86.0
2015 Male, age 80, both hemispheres 82.8
2383 Male, age 74, both hemispheres 73.7
Ventral medullary reticular nucleus
nTPM: 119.3
2060 Male, age 76, both hemispheres 130.4
2372 Male, age 61, both hemispheres 108.2
Ventral periolivary nuclei
nTPM: 113.4
2130 Female, age 85, both hemispheres 125.7
2165 Male, age 80, both hemispheres 117.9
2023 Male, age 76, both hemispheres 109.0
2794 Female, age 91, left hemisphere 101.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 103.5
2118 Male, age 80, both hemispheres 121.3
2180 Male, age 61, both hemispheres 110.5
2302 Female, age 91, both hemispheres 96.7
2741 Female, age 85, both hemispheres 94.5
1986 Male, age 76, both hemispheres 94.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 112.3
2456 Female, age 91, both hemispheres 127.5
2449 Male, age 74, both hemispheres 122.1
2840 Female, age 85, both hemispheres 117.3
2161 Male, age 80, both hemispheres 114.8
1959 Male, age 76, both hemispheres 102.7
2359 Male, age 61, both hemispheres 89.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 144.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 115.8
FF:10182-103D2 60 years, female 130.0
FF:10165-103B3 76 years, female 101.7
Medulla oblongata
Scaled Tags Per Million: 108.8
FF:10038-101F2 18-64 years, mixed 136.1
FF:10174-103C3 60 years, female 97.7
FF:10155-103A2 76 years, female 92.7
Pons
Scaled Tags Per Million: 144.2
FF:10033-101E6 18-54 years, mixed 144.2

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 46.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 42.9
Samples: 4

Max nTPM: 47.6
Min nTPM: 36.7
Sample A Female 45.8
Sample B Female 41.6
Sample C Male 47.6
Sample D Male 36.7
Pons
nTPM: 46.4
Samples: 4

Max nTPM: 65.0
Min nTPM: 39.0
Sample A Female 65.0
Sample B Female 39.0
Sample C Male 39.6
Sample D Male 42.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 24.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 24.0
Samples: 4

Max nTPM: 28.6
Min nTPM: 20.3
Sample A Male 28.6
Sample B Male 23.7
Sample C Female 23.5
Sample D Female 20.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.3
70523825 Antisense, RP_050309_01_G11, Mouse strain C57BL/6J (56 days, male) 3.3
Pons
Expression energy: 2.3
70523825 Antisense, RP_050309_01_G11, Mouse strain C57BL/6J (56 days, male) 2.3

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