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RPS26
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:424.3 nTPM
FANTOM5:16.3 Scaled Tags Per Million
Pig:1148.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA043961
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

424.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 424.3
Samples: 246

Max nTPM: 1283.6
Min nTPM: 149.3
Std nTPM: 223.9
Median nTPM: 387.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1283.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1190.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1148.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1036.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1013.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 931.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 906.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 894.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 890.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 889.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 883.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 879.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 870.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 855.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 844.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 844.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 828.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 823.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 817.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 802.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 790.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 788.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 778.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 773.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 766.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 735.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 732.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 730.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 714.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 713.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 702.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 699.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 698.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 693.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 691.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 689.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 684.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 670.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 670.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 650.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 647.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 645.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 642.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 629.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 629.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 616.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 606.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 599.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 594.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 588.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 579.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 577.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 571.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 561.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 560.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 547.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 540.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 539.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 536.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 532.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 526.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 521.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 520.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 520.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 516.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 511.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 505.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 505.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 505.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 505.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 500.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 495.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 492.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 492.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 489.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 488.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 488.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 486.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 485.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 484.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 483.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 480.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 476.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 476.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 476.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 474.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 472.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 471.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 466.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 465.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 464.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 461.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 457.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 454.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 453.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 452.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 451.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 449.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 445.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 444.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 443.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 442.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 440.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 438.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 438.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 433.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 432.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 432.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 432.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 431.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 431.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 428.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 423.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 419.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 416.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 410.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 404.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 404.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 401.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 391.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 389.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 388.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 387.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 386.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 380.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 380.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 380.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 380.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 378.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 375.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 373.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 371.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 369.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 366.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 364.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 362.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 361.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 360.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 359.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 357.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 353.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 352.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 350.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 346.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 338.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 330.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 325.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 324.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 315.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 315.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 311.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 310.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 291.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 287.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 284.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 284.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 282.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 280.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 280.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 273.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 271.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 271.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 270.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 270.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 269.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 268.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 267.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 262.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 262.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 259.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 255.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 254.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 250.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 249.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 244.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 243.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 241.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 241.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 239.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 238.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 237.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 237.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 236.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 234.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 231.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 229.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 228.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 228.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 225.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 224.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 223.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 223.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 223.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 222.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 217.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 216.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 216.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 215.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 215.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 215.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 211.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 210.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 210.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 203.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 199.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 198.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 196.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 195.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 195.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 192.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 192.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 192.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 192.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 191.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 191.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 190.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 190.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 190.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 189.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 188.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 187.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 187.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 186.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 186.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 186.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 185.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 184.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 183.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 183.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 182.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 182.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 182.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 181.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 181.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 179.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 171.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 169.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 166.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 165.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 163.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 163.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 161.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 157.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 153.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 152.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 149.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

16.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 16.3
FF:10164-103B2 76 years, female 16.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1148.5
Pig sample Sample description nTPM
Caudate
nTPM: 1148.5
Samples: 4

Max nTPM: 1197.2
Min nTPM: 1040.6
Sample A Female 1197.2
Sample B Female 1187.9
Sample C Male 1168.2
Sample D Male 1040.6

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