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RPL23A
HPA
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  • RPL23A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:828.4 nTPM
FANTOM5:13.6 Scaled Tags Per Million
Pig:1765.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051754
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

828.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 828.4
Samples: 246

Max nTPM: 1914.3
Min nTPM: 349.0
Std nTPM: 228.5
Median nTPM: 795.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1914.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1900.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1628.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1523.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1478.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1445.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1402.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1368.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1351.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1350.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1350.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1277.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1254.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1197.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1185.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1164.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1142.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1134.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1128.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1115.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1096.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1095.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1087.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1085.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1073.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1072.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1071.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1071.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1061.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1059.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1047.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1042.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1040.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1030.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1027.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1022.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1019.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1016.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1011.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1007.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1006.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 998.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 997.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 997.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 996.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 988.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 980.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 977.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 974.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 973.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 970.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 966.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 962.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 962.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 959.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 958.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 947.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 946.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 946.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 944.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 940.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 939.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 936.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 934.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 934.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 934.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 932.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 932.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 919.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 914.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 913.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 912.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 911.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 911.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 897.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 896.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 896.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 895.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 892.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 891.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 889.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 888.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 884.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 879.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 878.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 877.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 877.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 875.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 875.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 874.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 872.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 872.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 862.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 854.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 850.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 848.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 847.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 845.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 845.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 841.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 837.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 837.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 833.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 832.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 828.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 828.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 827.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 824.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 820.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 819.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 817.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 816.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 816.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 813.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 808.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 808.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 808.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 806.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 806.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 805.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 799.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 796.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 795.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 795.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 794.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 793.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 793.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 791.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 790.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 790.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 789.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 788.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 787.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 785.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 784.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 782.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 782.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 780.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 775.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 774.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 771.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 771.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 765.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 764.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 763.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 763.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 761.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 760.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 752.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 749.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 742.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 734.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 733.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 726.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 724.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 718.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 716.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 715.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 715.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 714.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 709.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 706.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 706.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 704.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 703.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 703.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 703.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 702.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 699.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 697.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 697.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 692.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 690.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 689.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 689.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 689.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 684.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 683.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 682.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 680.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 677.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 677.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 677.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 675.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 673.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 673.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 666.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 665.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 665.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 663.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 660.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 659.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 657.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 656.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 654.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 653.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 645.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 644.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 644.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 640.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 639.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 637.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 633.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 628.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 625.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 625.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 621.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 617.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 616.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 614.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 613.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 612.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 611.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 610.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 608.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 604.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 601.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 593.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 592.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 589.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 589.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 579.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 572.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 572.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 570.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 570.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 570.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 567.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 560.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 560.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 557.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 557.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 551.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 546.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 544.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 544.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 539.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 530.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 529.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 528.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 521.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 508.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 478.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 437.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 378.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 349.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

13.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 13.6
FF:10164-103B2 76 years, female 13.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1765.0
Pig sample Sample description nTPM
Caudate
nTPM: 1765.0
Samples: 4

Max nTPM: 2000.3
Min nTPM: 1469.5
Sample A Female 1837.9
Sample B Female 1752.2
Sample C Male 2000.3
Sample D Male 1469.5

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