PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:173.9 nTPM
FANTOM5:80.3 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:8.5 nTPM
Allen mouse:0.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 173.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 139.2
2090 Male, age 80, both hemispheres 160.7
2301 Female, age 85, both hemispheres 160.4
2188 Female, age 91, both hemispheres 152.4
1984 Male, age 76, both hemispheres 83.3
Area postrema
nTPM: 136.1
2306 Male, age 80, both hemispheres 203.4
2799 Male, age 61, both hemispheres 105.4
2054 Male, age 76, both hemispheres 99.5
Dorsal cochlear nucleus
nTPM: 120.8
2378 Male, age 80, both hemispheres 135.0
2370 Male, age 61, both hemispheres 122.7
2187 Female, age 91, both hemispheres 116.6
2058 Male, age 76, both hemispheres 116.4
2802 Male, age 74, right hemisphere 113.2
Dorsal medullary reticular nucleus
nTPM: 144.5
2373 Male, age 61, both hemispheres 177.9
2088 Male, age 76, both hemispheres 143.2
2040 Female, age 85, both hemispheres 112.4
Dorsal motor vagal complex
nTPM: 109.9
2185 Male, age 76, both hemispheres 182.7
2643 Male, age 74, both hemispheres 118.4
2797 Male, age 61, both hemispheres 109.6
2807 Female, age 85, both hemispheres 109.4
2000 Male, age 74, unknown 102.1
2844 Male, age 55, unknown 91.6
2813 Female, age 72, unknown 86.8
2133 Female, age 91, both hemispheres 78.6
Dorsal tegmental nucleus
nTPM: 112.1
2083 Male, age 80, both hemispheres 126.6
1936 Male, age 76, left hemisphere 124.7
2326 Male, age 74, both hemispheres 110.3
2358 Male, age 61, both hemispheres 86.9
Dorsolateral tegmental area
nTPM: 126.4
2337 Male, age 61, both hemispheres 187.1
2751 Female, age 85, both hemispheres 135.4
2654 Male, age 80, both hemispheres 120.3
2360 Male, age 74, both hemispheres 101.0
2141 Male, age 76, both hemispheres 88.3
Gigantocellular reticular nuclei, medullary
nTPM: 127.6
2314 Male, age 61, both hemispheres 196.1
2022 Male, age 76, right hemisphere 129.6
1876 Female, age 85, both hemispheres 125.7
2387 Female, age 91, both hemispheres 119.6
2310 Male, age 80, both hemispheres 112.7
2462 Male, age 74, both hemispheres 81.7
Gigantocellular reticular nuclei, pars
nTPM: 127.3
2336 Male, age 61, both hemispheres 155.7
2330 Male, age 80, both hemispheres 131.9
2706 Male, age 80, both hemispheres 130.4
2084 Female, age 85, both hemispheres 122.3
2168 Male, age 76, both hemispheres 96.1
Inferior olive
nTPM: 132.8
2178 Male, age 61, both hemispheres 187.3
2379 Male, age 80, both hemispheres 129.5
2628 Female, age 91, both hemispheres 127.3
2085 Female, age 85, both hemispheres 110.9
2563 Male, age 74, both hemispheres 109.0
Kolliker-Fuse nucleus
nTPM: 119.3
2793 Female, age 91, left hemisphere 168.7
2163 Male, age 80, both hemispheres 104.2
2315 Male, age 76, right hemisphere 85.2
Lateral lemniscal nuclei
nTPM: 121.2
2320 Female, age 91, left hemisphere 149.9
2746 Female, age 85, left hemisphere 141.7
2036 Male, age 80, both hemispheres 115.8
2169 Male, age 76, both hemispheres 102.6
2453 Male, age 74, right hemisphere 95.9
Lateral medullary reticular nucleus
nTPM: 147.0
2852 Male, age 80, both hemispheres 207.8
2374 Male, age 61, both hemispheres 172.7
2190 Female, age 85, both hemispheres 138.8
2305 Male, age 74, both hemispheres 136.6
2044 Male, age 76, both hemispheres 132.9
2804 Female, age 91, both hemispheres 93.4
Lateral parabrachial nucleus
nTPM: 142.7
2792 Male, age 76, both hemispheres 171.5
2013 Male, age 80, both hemispheres 157.0
2790 Male, age 61, both hemispheres 147.3
2139 Female, age 85, right hemisphere 94.8
Lateral vestibular nucleus
nTPM: 137.2
2184 Male, age 76, both hemispheres 149.1
2311 Male, age 80, both hemispheres 125.3
Locus coeruleus
nTPM: 67.0
2162 Male, age 80, both hemispheres 80.6
2720 Male, age 74, both hemispheres 79.5
2317 Female, age 72, unknown 76.3
2123 Female, age 91, both hemispheres 59.6
2014 Male, age 55, unknown 59.5
1980 Male, age 76, both hemispheres 56.7
2788 Male, age 74, unknown 56.5
Medial olivary nucleus
nTPM: 165.0
1943 Male, age 61, both hemispheres 238.0
2851 Male, age 80, both hemispheres 155.4
1962 Male, age 76, both hemispheres 136.9
2138 Female, age 91, both hemispheres 129.7
Medial parabrachial nucleus
nTPM: 133.6
2156 Male, age 61, both hemispheres 149.3
2786 Male, age 76, both hemispheres 147.6
2463 Female, age 85, right hemisphere 132.6
2170 Female, age 91, both hemispheres 126.2
2854 Male, age 80, both hemispheres 112.1
Medial periolivary nuclei
nTPM: 114.9
2081 Male, age 80, both hemispheres 164.8
2458 Female, age 91, both hemispheres 145.8
2791 Male, age 74, right hemisphere 104.3
2171 Female, age 85, both hemispheres 80.1
2063 Male, age 76, both hemispheres 79.5
Medial vestibular nucleus
nTPM: 102.5
2093 Male, age 80, both hemispheres 118.0
2624 Male, age 61, both hemispheres 111.4
2801 Male, age 74, both hemispheres 107.0
2803 Female, age 91, both hemispheres 106.5
2743 Female, age 85, both hemispheres 97.1
2134 Male, age 76, both hemispheres 74.8
Motor facial nucleus
nTPM: 114.9
2126 Male, age 61, both hemispheres 169.5
2697 Female, age 85, both hemispheres 157.9
2365 Male, age 74, right hemisphere 98.8
2327 Male, age 80, both hemispheres 97.6
2795 Female, age 91, both hemispheres 96.5
2062 Male, age 76, both hemispheres 69.3
Motor hypoglossal nucleus
nTPM: 111.4
2182 Male, age 80, both hemispheres 163.8
2125 Female, age 91, both hemispheres 120.4
2132 Female, age 85, both hemispheres 106.9
2461 Male, age 61, both hemispheres 89.1
2277 Male, age 76, both hemispheres 76.8
Motor trigeminal nucleus
nTPM: 140.3
2321 Female, age 91, both hemispheres 160.2
2309 Male, age 76, both hemispheres 155.8
2560 Male, age 74, both hemispheres 131.0
2335 Male, age 61, both hemispheres 128.6
2079 Male, age 80, both hemispheres 126.0
Nuclei of the trapezoid body
nTPM: 99.5
2166 Male, age 80, both hemispheres 150.6
2159 Male, age 61, both hemispheres 110.1
2368 Female, age 91, both hemispheres 109.4
1983 Male, age 76, both hemispheres 71.9
2735 Female, age 85, both hemispheres 55.7
Nucleus ambiguus
nTPM: 173.3
2096 Female, age 85, both hemispheres 196.3
2071 Male, age 76, both hemispheres 150.4
Nucleus cuneatus
nTPM: 145.3
2380 Male, age 80, both hemispheres 178.6
2100 Male, age 76, both hemispheres 164.8
2376 Male, age 61, both hemispheres 158.5
2808 Female, age 85, both hemispheres 144.1
2805 Female, age 91, both hemispheres 140.6
2131 Male, age 76, both hemispheres 140.1
2381 Male, age 80, both hemispheres 139.7
2564 Male, age 74, both hemispheres 121.9
2562 Male, age 61, both hemispheres 119.4
Nucleus gracilis
nTPM: 162.1
2382 Male, age 80, both hemispheres 191.0
2299 Female, age 85, both hemispheres 162.0
2627 Male, age 74, both hemispheres 133.2
Nucleus raphe magnus
nTPM: 98.0
2459 Female, age 91, both hemispheres 132.8
2051 Male, age 76, both hemispheres 126.9
2328 Male, age 80, both hemispheres 125.3
2455 Male, age 74, both hemispheres 89.9
2172 Female, age 85, both hemispheres 58.9
2160 Male, age 61, both hemispheres 54.2
Nucleus raphe obscurus
nTPM: 173.9
2142 Male, age 76, midline 195.3
2800 Male, age 61, midline 179.2
2845 Female, age 85, midline 147.3
Nucleus raphe pallidus
nTPM: 141.4
1924 Male, age 61, midline 158.8
2145 Male, age 76, midline 133.7
2183 Male, age 80, midline 131.6
Nucleus tractus solitarii
nTPM: 76.7
2307 Male, age 80, both hemispheres 96.6
2656 Male, age 76, both hemispheres 89.5
2191 Female, age 85, both hemispheres 77.0
2144 Female, age 91, right hemisphere 43.6
Paramedian reticular nucleus
nTPM: 102.1
2057 Male, age 80, both hemispheres 121.1
2052 Male, age 76, both hemispheres 105.4
2050 Female, age 85, both hemispheres 97.3
2313 Male, age 61, both hemispheres 84.6
Parvicellular reticular nuclei
nTPM: 127.2
2119 Male, age 80, both hemispheres 137.0
2095 Male, age 76, both hemispheres 129.8
2558 Male, age 74, both hemispheres 114.9
Parvicellular reticular nuclei, medullary
nTPM: 103.7
2189 Female, age 91, both hemispheres 117.1
2091 Female, age 85, both hemispheres 100.7
2181 Male, age 80, left hemisphere 93.3
Pedunculopontine tegmental nucleus
nTPM: 118.9
2338 Male, age 61, both hemispheres 151.9
2334 Male, age 80, both hemispheres 103.4
1921 Female, age 85, both hemispheres 101.5
Peritrigeminal nucleus
nTPM: 113.5
2179 Male, age 61, both hemispheres 121.2
2136 Male, age 76, both hemispheres 116.5
2067 Female, age 85, both hemispheres 102.8
Pontine nuclei
nTPM: 134.6
2115 Male, age 80, left hemisphere 189.2
2319 Female, age 91, both hemispheres 179.7
1968 Male, age 76, left hemisphere 152.3
2454 Male, age 74, left hemisphere 137.9
2109 Female, age 72, unknown 120.7
2787 Female, age 85, both hemispheres 104.7
1863 Male, age 55, unknown 100.7
2727 Male, age 61, right hemisphere 91.7
Pontine raphe nucleus
nTPM: 87.2
2122 Female, age 85, midline 87.8
2853 Male, age 76, midline 86.6
Posteroventral cochlear nucleus
nTPM: 150.0
2135 Female, age 91, both hemispheres 206.4
2341 Male, age 80, both hemispheres 165.9
2070 Male, age 76, both hemispheres 149.1
2371 Male, age 61, both hemispheres 144.8
2752 Female, age 85, both hemispheres 83.8
Prepositus hypoglossal nucleus
nTPM: 102.1
2086 Male, age 80, both hemispheres 106.4
2855 Female, age 85, right hemisphere 97.8
Principal sensory trigeminal nucleus
nTPM: 115.9
2367 Female, age 91, left hemisphere 146.3
2324 Male, age 76, both hemispheres 139.0
2008 Male, age 80, left hemisphere 92.6
2158 Male, age 61, both hemispheres 85.6
Reticular pontine nucleus, caudal
nTPM: 134.8
2457 Female, age 91, both hemispheres 143.4
2559 Male, age 74, both hemispheres 142.1
2092 Male, age 76, both hemispheres 136.9
2332 Male, age 80, right hemisphere 116.8
Reticular pontine nucleus, oral
nTPM: 139.3
2366 Female, age 91, both hemispheres 174.2
2167 Male, age 76, both hemispheres 144.0
1939 Male, age 80, both hemispheres 131.4
2012 Female, age 85, both hemispheres 125.7
2361 Male, age 74, both hemispheres 121.0
Reticulotegmental nucleus
nTPM: 111.6
2333 Male, age 80, both hemispheres 123.6
2452 Male, age 74, both hemispheres 118.0
2322 Female, age 91, both hemispheres 117.8
2325 Male, age 76, both hemispheres 86.9
Spinal trigeminal nucleus, caudal
nTPM: 132.4
2312 Male, age 61, both hemispheres 174.4
2308 Male, age 80, both hemispheres 152.3
2642 Male, age 74, both hemispheres 128.6
2447 Male, age 76, both hemispheres 116.4
2390 Female, age 91, both hemispheres 90.6
Spinal trigeminal nucleus, interpolar
nTPM: 90.3
2033 Male, age 80, both hemispheres 108.3
2389 Female, age 91, both hemispheres 98.4
2386 Female, age 85, both hemispheres 91.5
2066 Male, age 76, right hemisphere 80.7
2625 Male, age 61, both hemispheres 72.7
Spinal trigeminal nucleus, oral
nTPM: 114.6
2164 Male, age 80, both hemispheres 129.3
1978 Male, age 76, both hemispheres 126.3
2737 Female, age 85, both hemispheres 88.2
Spinal vestibular nucleus
nTPM: 122.1
2748 Male, age 76, both hemispheres 165.5
2384 Male, age 74, both hemispheres 138.6
2806 Female, age 85, both hemispheres 113.0
2780 Male, age 80, both hemispheres 110.1
2186 Female, age 91, both hemispheres 105.9
2796 Male, age 61, both hemispheres 99.8
Subcoeruleus area
nTPM: 119.6
2369 Female, age 85, left hemisphere 164.8
2089 Male, age 76, left hemisphere 146.0
2451 Male, age 74, both hemispheres 111.5
2323 Female, age 91, left hemisphere 91.1
1958 Male, age 80, both hemispheres 84.3
Superior olive
nTPM: 128.8
2020 Male, age 76, both hemispheres 146.2
2329 Male, age 80, right hemisphere 142.3
2561 Female, age 91, both hemispheres 137.9
2364 Male, age 74, right hemisphere 112.8
1875 Female, age 85, both hemispheres 104.7
Superior vestibular nucleus
nTPM: 98.7
2061 Male, age 76, both hemispheres 114.5
2015 Male, age 80, both hemispheres 99.0
2383 Male, age 74, both hemispheres 82.7
Ventral medullary reticular nucleus
nTPM: 169.0
2372 Male, age 61, both hemispheres 172.6
2060 Male, age 76, both hemispheres 165.4
Ventral periolivary nuclei
nTPM: 108.4
2023 Male, age 76, both hemispheres 142.5
2794 Female, age 91, left hemisphere 105.8
2165 Male, age 80, both hemispheres 99.8
2130 Female, age 85, both hemispheres 85.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 123.3
2118 Male, age 80, both hemispheres 155.2
2180 Male, age 61, both hemispheres 137.2
1986 Male, age 76, both hemispheres 123.0
2302 Female, age 91, both hemispheres 105.0
2741 Female, age 85, both hemispheres 95.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 127.2
2456 Female, age 91, both hemispheres 153.0
2359 Male, age 61, both hemispheres 143.4
1959 Male, age 76, both hemispheres 124.0
2840 Female, age 85, both hemispheres 121.8
2161 Male, age 80, both hemispheres 118.9
2449 Male, age 74, both hemispheres 101.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 80.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 80.3
FF:10165-103B3 76 years, female 82.3
FF:10182-103D2 60 years, female 78.4
Medulla oblongata
Scaled Tags Per Million: 60.3
FF:10038-101F2 18-64 years, mixed 78.6
FF:10155-103A2 76 years, female 65.7
FF:10174-103C3 60 years, female 36.6
Pons
Scaled Tags Per Million: 63.0
FF:10033-101E6 18-54 years, mixed 63.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 17.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 17.9
Samples: 4

Max nTPM: 21.4
Min nTPM: 11.0
Sample A Female 21.4
Sample B Female 11.0
Sample C Male 18.4
Sample D Male 20.9
Pons
nTPM: 9.8
Samples: 4

Max nTPM: 12.9
Min nTPM: 8.1
Sample A Female 9.9
Sample B Female 8.1
Sample C Male 8.4
Sample D Male 12.9

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 8.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 8.6
Samples: 4

Max nTPM: 9.4
Min nTPM: 7.6
Sample A Male 8.1
Sample B Male 9.4
Sample C Female 9.1
Sample D Female 7.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.5
71213755 Antisense, RP_050816_04_E10, Mouse strain C57BL/6J (56 days, male) 0.5
1265 Antisense, RP_Baylor_103343, Mouse strain C57BL/6J (56 days, male) 0.4
1266 Antisense, RP_Baylor_103343, Mouse strain C57BL/6J (56 days, male) 0.1
Pons
Expression energy: 0.4
1265 Antisense, RP_Baylor_103343, Mouse strain C57BL/6J (56 days, male) 0.5
71213755 Antisense, RP_050816_04_E10, Mouse strain C57BL/6J (56 days, male) 0.3
1266 Antisense, RP_Baylor_103343, Mouse strain C57BL/6J (56 days, male) 0.1

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