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PJA2
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  • PJA2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:75.3 nTPM
FANTOM5:155.0 Scaled Tags Per Million
Pig:200.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040347
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 75.3
Samples: 246

Max nTPM: 239.2
Min nTPM: 31.9
Std nTPM: 27.6
Median nTPM: 70.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 239.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 188.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 154.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 142.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 140.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 138.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 135.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 129.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 128.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 128.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 126.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 123.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 121.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 120.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 119.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 119.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 119.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 119.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 119.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 117.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 116.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 115.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 112.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 110.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 110.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 108.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 107.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 107.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 106.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 106.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 106.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 106.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 105.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 103.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 103.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 103.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 103.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 102.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 99.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 99.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 99.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 99.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 98.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 98.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 98.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 97.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 96.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 96.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 94.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 94.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 94.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 94.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 94.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 93.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 93.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 93.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 92.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 92.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 92.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 92.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 91.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 91.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 90.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 90.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 89.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 89.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 89.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 89.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 88.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 87.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 87.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 87.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 86.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 85.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 85.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 85.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 85.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 84.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 83.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 83.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 83.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 83.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 83.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 82.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 82.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 81.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 81.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 81.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 80.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 80.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 78.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 78.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 78.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 78.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 77.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 77.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 77.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 77.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 77.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 76.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 76.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 76.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 76.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 75.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 75.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 74.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 74.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 74.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 74.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 74.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 74.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 74.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 73.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 72.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 72.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 71.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 71.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 71.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 71.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 71.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 71.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 71.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 70.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 70.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 70.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 69.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 69.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 69.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 69.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 68.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 68.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 68.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 68.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 68.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 68.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 67.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 67.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 67.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 66.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 66.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 65.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 65.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 64.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 63.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 63.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 63.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 63.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 62.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 62.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 62.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 62.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 62.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 62.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 62.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 61.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 61.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 60.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 60.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 60.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 60.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 59.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 59.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 59.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 59.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 58.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 58.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 58.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 58.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 58.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 57.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 57.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 57.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 57.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 57.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 57.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 57.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 57.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 57.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 56.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 56.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 56.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 55.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 55.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 55.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 55.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 54.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 54.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 54.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 54.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 54.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 54.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 54.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 53.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 53.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 53.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 52.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 52.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 52.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 51.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 51.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 51.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 51.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 50.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 50.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 50.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 50.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 50.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 49.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 49.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 49.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 48.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 48.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 47.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 47.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 47.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 47.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 47.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 47.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 46.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 45.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 45.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 45.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 45.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 44.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 44.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 44.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 43.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 43.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 43.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 42.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 42.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 42.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 41.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 41.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 41.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 40.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 40.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 39.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 39.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 39.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 39.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 38.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 37.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 35.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 35.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 31.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

155.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 155.0
FF:10164-103B2 76 years, female 155.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

200.7
Pig sample Sample description nTPM
Caudate
nTPM: 200.8
Samples: 4

Max nTPM: 210.6
Min nTPM: 183.9
Sample A Female 210.6
Sample B Female 183.9
Sample C Male 204.8
Sample D Male 203.7

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