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ARL2
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:230.1 nTPM
FANTOM5:183.3 Scaled Tags Per Million
Pig:130.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044610
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

230.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 230.1
Samples: 246

Max nTPM: 551.4
Min nTPM: 79.1
Std nTPM: 72.4
Median nTPM: 220.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 551.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 499.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 461.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 426.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 417.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 406.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 403.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 381.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 378.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 373.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 365.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 365.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 364.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 363.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 354.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 353.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 343.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 338.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 332.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 325.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 322.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 319.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 317.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 317.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 313.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 313.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 311.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 309.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 305.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 305.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 303.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 302.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 301.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 299.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 297.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 296.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 296.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 294.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 294.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 293.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 291.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 291.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 291.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 290.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 290.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 288.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 287.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 283.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 281.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 279.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 279.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 278.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 278.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 277.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 277.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 276.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 276.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 276.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 276.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 274.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 273.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 273.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 272.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 271.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 271.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 271.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 269.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 268.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 268.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 267.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 266.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 265.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 263.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 263.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 259.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 259.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 259.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 259.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 258.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 257.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 255.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 255.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 254.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 253.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 252.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 252.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 252.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 250.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 250.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 250.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 249.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 247.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 246.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 245.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 245.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 245.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 244.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 243.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 243.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 243.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 243.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 242.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 242.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 240.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 239.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 239.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 236.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 235.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 234.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 233.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 233.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 232.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 231.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 230.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 230.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 229.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 228.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 228.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 228.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 228.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 226.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 222.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 220.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 220.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 220.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 219.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 219.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 219.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 218.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 217.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 217.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 217.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 216.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 214.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 213.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 212.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 211.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 210.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 209.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 209.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 208.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 208.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 207.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 206.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 206.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 206.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 204.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 203.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 202.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 201.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 201.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 200.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 200.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 200.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 200.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 199.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 199.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 199.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 198.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 195.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 194.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 194.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 192.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 192.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 191.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 191.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 190.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 190.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 190.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 188.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 188.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 187.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 187.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 185.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 183.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 182.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 182.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 180.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 180.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 179.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 179.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 179.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 179.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 178.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 178.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 177.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 176.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 175.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 174.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 173.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 172.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 172.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 171.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 170.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 170.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 168.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 168.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 167.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 167.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 167.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 164.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 164.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 164.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 163.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 163.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 161.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 159.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 157.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 155.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 152.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 151.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 151.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 150.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 150.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 150.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 149.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 147.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 147.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 146.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 146.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 145.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 144.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 144.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 142.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 140.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 140.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 138.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 137.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 137.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 137.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 135.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 135.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 131.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 131.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 129.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 129.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 127.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 126.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 126.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 125.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 125.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 114.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 108.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 107.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 100.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 79.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

183.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 183.3
FF:10164-103B2 76 years, female 183.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.5
Pig sample Sample description nTPM
Caudate
nTPM: 130.5
Samples: 4

Max nTPM: 157.6
Min nTPM: 104.8
Sample A Female 104.8
Sample B Female 148.6
Sample C Male 157.6
Sample D Male 111.0

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