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FIS1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:228.2 nTPM
FANTOM5:108.0 Scaled Tags Per Million
Pig:202.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA017430
Glial cells Medium
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

228.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 228.2
Samples: 246

Max nTPM: 551.8
Min nTPM: 113.1
Std nTPM: 63.2
Median nTPM: 217.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 551.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 544.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 463.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 446.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 429.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 426.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 382.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 374.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 372.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 368.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 367.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 346.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 342.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 338.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 337.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 332.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 330.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 323.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 310.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 298.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 295.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 295.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 292.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 292.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 292.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 290.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 286.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 285.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 285.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 282.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 280.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 278.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 278.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 277.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 274.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 274.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 274.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 273.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 273.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 272.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 271.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 269.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 269.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 268.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 267.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 266.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 265.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 265.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 265.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 264.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 263.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 263.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 262.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 261.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 260.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 259.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 258.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 257.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 256.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 254.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 253.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 253.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 252.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 251.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 250.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 250.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 249.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 249.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 249.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 249.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 249.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 247.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 246.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 246.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 246.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 245.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 245.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 243.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 243.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 243.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 241.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 241.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 240.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 240.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 239.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 239.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 239.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 239.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 238.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 237.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 236.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 235.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 235.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 235.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 234.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 234.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 232.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 232.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 232.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 231.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 231.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 231.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 230.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 230.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 229.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 229.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 228.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 226.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 226.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 226.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 226.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 225.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 224.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 223.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 221.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 220.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 220.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 220.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 218.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 217.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 217.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 217.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 217.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 217.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 216.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 216.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 216.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 215.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 213.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 213.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 212.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 211.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 211.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 210.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 210.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 210.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 209.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 209.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 208.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 207.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 207.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 207.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 206.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 206.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 205.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 204.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 204.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 204.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 203.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 202.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 202.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 202.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 202.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 201.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 201.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 200.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 200.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 200.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 199.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 198.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 197.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 197.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 197.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 196.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 196.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 196.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 195.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 195.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 194.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 193.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 193.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 193.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 193.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 191.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 191.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 191.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 190.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 190.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 190.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 190.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 189.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 188.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 187.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 186.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 186.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 185.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 185.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 185.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 185.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 184.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 184.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 183.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 183.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 183.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 182.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 182.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 182.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 181.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 180.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 180.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 179.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 179.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 179.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 179.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 177.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 177.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 176.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 176.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 176.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 176.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 175.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 174.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 173.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 173.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 173.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 172.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 172.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 172.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 172.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 171.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 171.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 171.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 170.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 169.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 166.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 166.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 163.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 160.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 160.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 157.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 157.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 156.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 156.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 155.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 151.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 151.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 148.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 148.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 138.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 138.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 135.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 134.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 128.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 124.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 115.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 113.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

108.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 108.0
FF:10164-103B2 76 years, female 108.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

202.0
Pig sample Sample description nTPM
Caudate
nTPM: 202.0
Samples: 4

Max nTPM: 233.2
Min nTPM: 181.0
Sample A Female 181.0
Sample B Female 211.4
Sample C Male 233.2
Sample D Male 182.3

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