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RPL36A
HPA
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  • RPL36A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:734.7 nTPM
FANTOM5:55.6 Scaled Tags Per Million
Pig:44.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA063979
Glial cells Not detected
Neuronal cells Low


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

734.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 734.7
Samples: 246

Max nTPM: 1805.7
Min nTPM: 384.4
Std nTPM: 214.2
Median nTPM: 693.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1805.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1598.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1506.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1334.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1323.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1322.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1308.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1298.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1293.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1282.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1229.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1223.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1134.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1127.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1112.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1082.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1070.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1067.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1065.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1027.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 995.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 993.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 993.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 991.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 989.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 976.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 971.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 969.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 964.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 963.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 961.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 947.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 943.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 929.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 928.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 917.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 916.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 911.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 907.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 902.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 900.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 898.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 898.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 888.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 887.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 881.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 879.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 877.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 866.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 866.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 865.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 857.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 845.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 842.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 841.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 839.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 838.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 836.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 834.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 834.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 832.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 819.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 818.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 817.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 816.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 816.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 810.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 810.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 810.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 808.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 807.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 800.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 789.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 789.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 785.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 785.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 783.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 780.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 777.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 773.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 771.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 770.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 770.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 769.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 765.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 763.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 762.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 761.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 757.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 755.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 752.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 752.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 749.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 748.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 747.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 746.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 741.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 738.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 737.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 734.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 734.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 734.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 734.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 733.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 733.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 731.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 729.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 727.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 725.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 721.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 721.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 717.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 715.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 715.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 714.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 711.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 708.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 707.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 705.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 698.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 697.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 695.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 694.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 693.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 690.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 690.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 689.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 686.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 686.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 684.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 683.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 679.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 677.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 676.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 675.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 673.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 672.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 671.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 669.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 668.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 665.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 665.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 664.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 664.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 663.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 661.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 659.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 657.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 656.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 655.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 653.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 649.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 648.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 647.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 643.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 642.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 641.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 637.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 637.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 636.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 636.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 636.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 633.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 630.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 628.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 623.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 623.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 620.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 618.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 617.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 616.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 615.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 612.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 612.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 610.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 604.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 602.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 602.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 599.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 598.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 598.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 595.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 594.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 592.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 590.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 589.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 588.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 588.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 583.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 580.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 574.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 574.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 572.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 571.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 565.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 564.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 562.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 559.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 559.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 554.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 554.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 553.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 549.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 548.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 545.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 543.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 542.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 542.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 542.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 538.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 537.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 533.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 529.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 525.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 525.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 525.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 524.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 521.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 520.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 519.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 514.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 514.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 513.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 513.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 512.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 502.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 501.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 493.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 491.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 491.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 488.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 484.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 483.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 476.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 468.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 463.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 462.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 458.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 455.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 446.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 444.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 441.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 432.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 427.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 418.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 384.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

55.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 55.6
FF:10164-103B2 76 years, female 55.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.8
Pig sample Sample description nTPM
Caudate
nTPM: 44.8
Samples: 4

Max nTPM: 48.3
Min nTPM: 38.6
Sample A Female 47.2
Sample B Female 45.1
Sample C Male 48.3
Sample D Male 38.6

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