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EID1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:138.8 nTPM
FANTOM5:537.8 Scaled Tags Per Million
Pig:185.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051122Antibody HPA051123
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

138.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 138.8
Samples: 246

Max nTPM: 292.3
Min nTPM: 65.8
Std nTPM: 35.4
Median nTPM: 130.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 292.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 278.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 274.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 271.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 266.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 254.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 242.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 227.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 218.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 207.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 205.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 196.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 196.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 195.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 192.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 192.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 189.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 188.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 185.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 185.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 184.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 184.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 182.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 181.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 180.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 179.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 179.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 178.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 175.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 174.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 173.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 170.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 170.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 170.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 169.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 168.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 168.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 167.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 167.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 167.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 167.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 166.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 165.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 165.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 165.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 164.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 164.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 164.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 163.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 163.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 163.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 162.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 162.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 162.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 160.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 160.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 160.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 158.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 158.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 157.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 157.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 157.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 156.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 156.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 154.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 153.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 153.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 153.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 152.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 152.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 151.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 149.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 148.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 148.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 148.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 148.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 147.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 147.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 147.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 146.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 145.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 145.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 144.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 143.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 143.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 142.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 142.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 142.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 141.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 141.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 141.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 140.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 139.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 139.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 139.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 138.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 138.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 138.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 137.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 137.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 137.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 136.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 136.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 136.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 135.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 135.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 135.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 135.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 134.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 134.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 134.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 133.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 133.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 133.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 133.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 132.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 132.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 131.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 131.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 131.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 130.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 130.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 130.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 130.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 129.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 129.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 129.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 129.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 128.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 128.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 128.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 127.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 127.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 127.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 127.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 127.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 127.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 127.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 127.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 127.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 126.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 125.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 125.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 125.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 125.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 125.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 125.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 125.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 124.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 124.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 124.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 124.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 123.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 123.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 123.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 123.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 122.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 122.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 122.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 122.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 122.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 121.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 121.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 121.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 121.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 121.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 120.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 120.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 120.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 120.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 119.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 119.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 119.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 119.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 119.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 118.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 118.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 118.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 118.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 118.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 118.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 118.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 118.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 117.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 117.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 116.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 116.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 116.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 116.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 115.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 115.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 115.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 114.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 114.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 113.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 113.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 113.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 113.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 113.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 112.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 112.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 111.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 111.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 111.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 111.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 110.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 110.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 110.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 109.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 109.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 109.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 108.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 107.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 107.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 107.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 106.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 106.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 106.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 106.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 105.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 105.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 105.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 105.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 104.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 101.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 101.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 101.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 101.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 100.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 99.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 98.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 98.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 97.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 95.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 93.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 93.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 92.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 90.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 90.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 86.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 85.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 83.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 83.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 81.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 66.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 65.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

537.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 537.8
FF:10164-103B2 76 years, female 537.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

185.2
Pig sample Sample description nTPM
Caudate
nTPM: 185.3
Samples: 4

Max nTPM: 206.2
Min nTPM: 149.4
Sample A Female 185.7
Sample B Female 206.2
Sample C Male 199.8
Sample D Male 149.4

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