PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:66.2 nTPM
FANTOM5:96.8 Scaled Tags Per Million
Pig:53.4 nTPM
Mouse:38.9 nTPM
Allen mouse:3.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 66.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 58.5
1984 Male, age 76, both hemispheres 67.2
2301 Female, age 85, both hemispheres 59.2
2090 Male, age 80, both hemispheres 56.1
2188 Female, age 91, both hemispheres 51.2
Area postrema
nTPM: 63.5
2306 Male, age 80, both hemispheres 68.7
2799 Male, age 61, both hemispheres 68.1
2054 Male, age 76, both hemispheres 53.9
Dorsal cochlear nucleus
nTPM: 53.2
2802 Male, age 74, right hemisphere 57.2
2187 Female, age 91, both hemispheres 54.6
2378 Male, age 80, both hemispheres 54.2
2370 Male, age 61, both hemispheres 52.5
2058 Male, age 76, both hemispheres 47.6
Dorsal medullary reticular nucleus
nTPM: 49.8
2088 Male, age 76, both hemispheres 54.4
2373 Male, age 61, both hemispheres 53.6
2040 Female, age 85, both hemispheres 41.5
Dorsal motor vagal complex
nTPM: 55.7
2643 Male, age 74, both hemispheres 66.0
2797 Male, age 61, both hemispheres 62.7
2185 Male, age 76, both hemispheres 62.2
2807 Female, age 85, both hemispheres 58.2
2844 Male, age 55, unknown 54.8
2000 Male, age 74, unknown 49.0
2813 Female, age 72, unknown 47.2
2133 Female, age 91, both hemispheres 46.0
Dorsal tegmental nucleus
nTPM: 54.2
2358 Male, age 61, both hemispheres 57.7
2083 Male, age 80, both hemispheres 54.8
2326 Male, age 74, both hemispheres 54.7
1936 Male, age 76, left hemisphere 49.5
Dorsolateral tegmental area
nTPM: 50.8
2337 Male, age 61, both hemispheres 70.7
2654 Male, age 80, both hemispheres 49.3
2141 Male, age 76, both hemispheres 47.0
2751 Female, age 85, both hemispheres 44.5
2360 Male, age 74, both hemispheres 42.4
Gigantocellular reticular nuclei, medullary
nTPM: 48.3
2314 Male, age 61, both hemispheres 65.7
2310 Male, age 80, both hemispheres 49.3
2022 Male, age 76, right hemisphere 48.6
2387 Female, age 91, both hemispheres 46.5
1876 Female, age 85, both hemispheres 41.3
2462 Male, age 74, both hemispheres 38.4
Gigantocellular reticular nuclei, pars
nTPM: 49.0
2330 Male, age 80, both hemispheres 58.5
2336 Male, age 61, both hemispheres 54.6
2706 Male, age 80, both hemispheres 48.2
2084 Female, age 85, both hemispheres 45.7
2168 Male, age 76, both hemispheres 37.8
Inferior olive
nTPM: 66.2
2085 Female, age 85, both hemispheres 76.7
2178 Male, age 61, both hemispheres 68.8
2379 Male, age 80, both hemispheres 64.4
2563 Male, age 74, both hemispheres 61.5
2628 Female, age 91, both hemispheres 59.4
Kolliker-Fuse nucleus
nTPM: 50.2
2315 Male, age 76, right hemisphere 55.4
2793 Female, age 91, left hemisphere 49.6
2163 Male, age 80, both hemispheres 45.6
Lateral lemniscal nuclei
nTPM: 40.0
2320 Female, age 91, left hemisphere 48.3
2746 Female, age 85, left hemisphere 41.6
2453 Male, age 74, right hemisphere 40.8
2169 Male, age 76, both hemispheres 38.1
2036 Male, age 80, both hemispheres 31.0
Lateral medullary reticular nucleus
nTPM: 59.4
2804 Female, age 91, both hemispheres 71.6
2374 Male, age 61, both hemispheres 65.2
2190 Female, age 85, both hemispheres 60.9
2305 Male, age 74, both hemispheres 57.3
2852 Male, age 80, both hemispheres 56.6
2044 Male, age 76, both hemispheres 44.6
Lateral parabrachial nucleus
nTPM: 44.7
2792 Male, age 76, both hemispheres 51.4
2013 Male, age 80, both hemispheres 45.3
2790 Male, age 61, both hemispheres 44.0
2139 Female, age 85, right hemisphere 38.0
Lateral vestibular nucleus
nTPM: 53.7
2311 Male, age 80, both hemispheres 60.2
2184 Male, age 76, both hemispheres 47.2
Locus coeruleus
nTPM: 39.1
2162 Male, age 80, both hemispheres 45.9
2720 Male, age 74, both hemispheres 43.9
2317 Female, age 72, unknown 42.0
2123 Female, age 91, both hemispheres 38.4
1980 Male, age 76, both hemispheres 36.8
2788 Male, age 74, unknown 33.5
2014 Male, age 55, unknown 33.2
Medial olivary nucleus
nTPM: 58.5
1943 Male, age 61, both hemispheres 61.8
2138 Female, age 91, both hemispheres 61.5
1962 Male, age 76, both hemispheres 55.3
2851 Male, age 80, both hemispheres 55.3
Medial parabrachial nucleus
nTPM: 51.2
2463 Female, age 85, right hemisphere 60.5
2170 Female, age 91, both hemispheres 53.4
2786 Male, age 76, both hemispheres 48.3
2156 Male, age 61, both hemispheres 47.4
2854 Male, age 80, both hemispheres 46.6
Medial periolivary nuclei
nTPM: 40.7
2081 Male, age 80, both hemispheres 49.4
2458 Female, age 91, both hemispheres 46.1
2791 Male, age 74, right hemisphere 39.2
2063 Male, age 76, both hemispheres 35.3
2171 Female, age 85, both hemispheres 33.6
Medial vestibular nucleus
nTPM: 48.8
2624 Male, age 61, both hemispheres 52.7
2801 Male, age 74, both hemispheres 51.9
2803 Female, age 91, both hemispheres 50.9
2093 Male, age 80, both hemispheres 49.5
2743 Female, age 85, both hemispheres 45.8
2134 Male, age 76, both hemispheres 41.9
Motor facial nucleus
nTPM: 43.7
2126 Male, age 61, both hemispheres 50.7
2327 Male, age 80, both hemispheres 46.2
2795 Female, age 91, both hemispheres 46.2
2365 Male, age 74, right hemisphere 43.5
2697 Female, age 85, both hemispheres 41.2
2062 Male, age 76, both hemispheres 34.5
Motor hypoglossal nucleus
nTPM: 51.4
2182 Male, age 80, both hemispheres 63.8
2277 Male, age 76, both hemispheres 53.0
2125 Female, age 91, both hemispheres 50.4
2132 Female, age 85, both hemispheres 49.3
2461 Male, age 61, both hemispheres 40.5
Motor trigeminal nucleus
nTPM: 47.6
2321 Female, age 91, both hemispheres 55.9
2335 Male, age 61, both hemispheres 51.3
2309 Male, age 76, both hemispheres 47.3
2560 Male, age 74, both hemispheres 44.1
2079 Male, age 80, both hemispheres 39.3
Nuclei of the trapezoid body
nTPM: 38.9
2166 Male, age 80, both hemispheres 46.2
2368 Female, age 91, both hemispheres 44.2
1983 Male, age 76, both hemispheres 37.1
2735 Female, age 85, both hemispheres 34.5
2159 Male, age 61, both hemispheres 32.6
Nucleus ambiguus
nTPM: 56.2
2071 Male, age 76, both hemispheres 62.9
2096 Female, age 85, both hemispheres 49.4
Nucleus cuneatus
nTPM: 57.1
2808 Female, age 85, both hemispheres 62.6
2805 Female, age 91, both hemispheres 62.5
2564 Male, age 74, both hemispheres 61.7
2100 Male, age 76, both hemispheres 59.8
2380 Male, age 80, both hemispheres 59.5
2381 Male, age 80, both hemispheres 58.5
2562 Male, age 61, both hemispheres 51.9
2131 Male, age 76, both hemispheres 49.1
2376 Male, age 61, both hemispheres 48.5
Nucleus gracilis
nTPM: 64.9
2299 Female, age 85, both hemispheres 69.6
2382 Male, age 80, both hemispheres 63.4
2627 Male, age 74, both hemispheres 61.7
Nucleus raphe magnus
nTPM: 38.3
2328 Male, age 80, both hemispheres 45.3
2459 Female, age 91, both hemispheres 43.4
2455 Male, age 74, both hemispheres 40.7
2051 Male, age 76, both hemispheres 38.0
2172 Female, age 85, both hemispheres 35.2
2160 Male, age 61, both hemispheres 27.2
Nucleus raphe obscurus
nTPM: 63.6
2845 Female, age 85, midline 66.2
2142 Male, age 76, midline 62.6
2800 Male, age 61, midline 62.0
Nucleus raphe pallidus
nTPM: 60.4
2145 Male, age 76, midline 67.4
1924 Male, age 61, midline 62.2
2183 Male, age 80, midline 51.6
Nucleus tractus solitarii
nTPM: 48.4
2307 Male, age 80, both hemispheres 59.2
2191 Female, age 85, both hemispheres 54.1
2656 Male, age 76, both hemispheres 45.6
2144 Female, age 91, right hemisphere 34.9
Paramedian reticular nucleus
nTPM: 40.3
2057 Male, age 80, both hemispheres 46.7
2313 Male, age 61, both hemispheres 42.4
2052 Male, age 76, both hemispheres 38.1
2050 Female, age 85, both hemispheres 34.0
Parvicellular reticular nuclei
nTPM: 46.1
2119 Male, age 80, both hemispheres 48.9
2095 Male, age 76, both hemispheres 47.3
2558 Male, age 74, both hemispheres 42.2
Parvicellular reticular nuclei, medullary
nTPM: 49.7
2189 Female, age 91, both hemispheres 52.8
2181 Male, age 80, left hemisphere 49.0
2091 Female, age 85, both hemispheres 47.3
Pedunculopontine tegmental nucleus
nTPM: 51.3
2338 Male, age 61, both hemispheres 58.0
1921 Female, age 85, both hemispheres 48.9
2334 Male, age 80, both hemispheres 47.0
Peritrigeminal nucleus
nTPM: 52.2
2136 Male, age 76, both hemispheres 54.8
2067 Female, age 85, both hemispheres 51.6
2179 Male, age 61, both hemispheres 50.1
Pontine nuclei
nTPM: 39.1
2115 Male, age 80, left hemisphere 50.5
2319 Female, age 91, both hemispheres 48.3
2454 Male, age 74, left hemisphere 41.0
2109 Female, age 72, unknown 38.9
1968 Male, age 76, left hemisphere 36.5
1863 Male, age 55, unknown 35.0
2787 Female, age 85, both hemispheres 34.8
2727 Male, age 61, right hemisphere 27.9
Pontine raphe nucleus
nTPM: 39.9
2853 Male, age 76, midline 46.2
2122 Female, age 85, midline 33.7
Posteroventral cochlear nucleus
nTPM: 49.7
2135 Female, age 91, both hemispheres 54.9
2341 Male, age 80, both hemispheres 51.9
2371 Male, age 61, both hemispheres 49.2
2070 Male, age 76, both hemispheres 48.8
2752 Female, age 85, both hemispheres 43.4
Prepositus hypoglossal nucleus
nTPM: 50.1
2086 Male, age 80, both hemispheres 52.8
2855 Female, age 85, right hemisphere 47.3
Principal sensory trigeminal nucleus
nTPM: 42.1
2367 Female, age 91, left hemisphere 50.0
2324 Male, age 76, both hemispheres 48.2
2008 Male, age 80, left hemisphere 36.4
2158 Male, age 61, both hemispheres 33.7
Reticular pontine nucleus, caudal
nTPM: 44.6
2457 Female, age 91, both hemispheres 50.0
2559 Male, age 74, both hemispheres 48.2
2092 Male, age 76, both hemispheres 40.4
2332 Male, age 80, right hemisphere 39.9
Reticular pontine nucleus, oral
nTPM: 45.7
2366 Female, age 91, both hemispheres 50.3
2167 Male, age 76, both hemispheres 47.4
2361 Male, age 74, both hemispheres 46.4
1939 Male, age 80, both hemispheres 44.8
2012 Female, age 85, both hemispheres 39.7
Reticulotegmental nucleus
nTPM: 48.0
2322 Female, age 91, both hemispheres 51.8
2333 Male, age 80, both hemispheres 50.9
2452 Male, age 74, both hemispheres 48.9
2325 Male, age 76, both hemispheres 40.3
Spinal trigeminal nucleus, caudal
nTPM: 54.0
2308 Male, age 80, both hemispheres 59.4
2642 Male, age 74, both hemispheres 58.3
2312 Male, age 61, both hemispheres 55.1
2447 Male, age 76, both hemispheres 50.1
2390 Female, age 91, both hemispheres 47.2
Spinal trigeminal nucleus, interpolar
nTPM: 44.5
2389 Female, age 91, both hemispheres 49.6
2033 Male, age 80, both hemispheres 45.3
2386 Female, age 85, both hemispheres 44.4
2625 Male, age 61, both hemispheres 44.3
2066 Male, age 76, right hemisphere 38.7
Spinal trigeminal nucleus, oral
nTPM: 49.4
2164 Male, age 80, both hemispheres 50.5
2737 Female, age 85, both hemispheres 49.5
1978 Male, age 76, both hemispheres 48.3
Spinal vestibular nucleus
nTPM: 50.0
2384 Male, age 74, both hemispheres 57.0
2796 Male, age 61, both hemispheres 50.8
2748 Male, age 76, both hemispheres 50.4
2186 Female, age 91, both hemispheres 48.1
2806 Female, age 85, both hemispheres 48.1
2780 Male, age 80, both hemispheres 45.3
Subcoeruleus area
nTPM: 46.7
2451 Male, age 74, both hemispheres 54.7
2369 Female, age 85, left hemisphere 48.1
2323 Female, age 91, left hemisphere 44.0
2089 Male, age 76, left hemisphere 43.5
1958 Male, age 80, both hemispheres 43.4
Superior olive
nTPM: 42.0
2561 Female, age 91, both hemispheres 49.1
2329 Male, age 80, right hemisphere 45.8
2364 Male, age 74, right hemisphere 43.1
2020 Male, age 76, both hemispheres 38.8
1875 Female, age 85, both hemispheres 33.1
Superior vestibular nucleus
nTPM: 49.8
2061 Male, age 76, both hemispheres 51.6
2015 Male, age 80, both hemispheres 49.6
2383 Male, age 74, both hemispheres 48.3
Ventral medullary reticular nucleus
nTPM: 55.9
2372 Male, age 61, both hemispheres 60.5
2060 Male, age 76, both hemispheres 51.3
Ventral periolivary nuclei
nTPM: 39.8
2794 Female, age 91, left hemisphere 41.7
2023 Male, age 76, both hemispheres 41.6
2165 Male, age 80, both hemispheres 39.7
2130 Female, age 85, both hemispheres 36.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 54.1
2118 Male, age 80, both hemispheres 63.5
2302 Female, age 91, both hemispheres 59.5
2180 Male, age 61, both hemispheres 54.3
1986 Male, age 76, both hemispheres 47.5
2741 Female, age 85, both hemispheres 45.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 43.1
2359 Male, age 61, both hemispheres 49.4
2456 Female, age 91, both hemispheres 46.7
2161 Male, age 80, both hemispheres 42.7
2449 Male, age 74, both hemispheres 42.5
2840 Female, age 85, both hemispheres 41.3
1959 Male, age 76, both hemispheres 36.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 96.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 71.1
FF:10182-103D2 60 years, female 72.8
FF:10165-103B3 76 years, female 69.4
Medulla oblongata
Scaled Tags Per Million: 96.8
FF:10038-101F2 18-64 years, mixed 112.3
FF:10155-103A2 76 years, female 96.8
FF:10174-103C3 60 years, female 81.1
Pons
Scaled Tags Per Million: 78.4
FF:10033-101E6 18-54 years, mixed 78.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 53.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 53.4
Samples: 4

Max nTPM: 58.4
Min nTPM: 48.8
Sample A Female 51.3
Sample B Female 48.8
Sample C Male 58.4
Sample D Male 55.2
Pons
nTPM: 51.0
Samples: 4

Max nTPM: 68.2
Min nTPM: 40.7
Sample A Female 68.2
Sample B Female 40.7
Sample C Male 45.2
Sample D Male 49.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 38.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 38.9
Samples: 4

Max nTPM: 41.6
Min nTPM: 37.3
Sample A Male 41.6
Sample B Male 37.3
Sample C Female 38.9
Sample D Female 37.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.5
79556618 Antisense, RP_071018_03_D07, Mouse strain C57BL/6J (56 days, male) 3.5
79394357 Antisense, RP_071018_03_D07, Mouse strain C57BL/6J (56 days, male) 0.8
Pons
Expression energy: 1.5
79556618 Antisense, RP_071018_03_D07, Mouse strain C57BL/6J (56 days, male) 1.5
79394357 Antisense, RP_071018_03_D07, Mouse strain C57BL/6J (56 days, male) 0.5

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