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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:14.9 nTPM
HPA Brain:48.1 nTPM
GTEx:14.9 nTPM
FANTOM5:49.2 Scaled Tags Per Million
Pig:19.3 nTPM
Mouse:40.4 nTPM
Allen mouse:5.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA036359Antibody HPA036360Antibody CAB009569
Glial cells LowNot detectedLow
Neuronal cells MediumMediumLow







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

48.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 37.4
2288 Male, age 75, left hemisphere 41.6
1854 Male, age 80, left hemisphere 39.4
2846 Female, age 79, unknown 38.3
2289 Male, age 61, right hemisphere 37.7
2481 Female, age 94, left hemisphere 37.5
2290 Female, age 72, unknown 36.7
1857 Female, age 85, left hemisphere 35.8
1781 Male, age 74, unknown 31.8
Globus pallidus, externus
nTPM: 47.2
1996 Male, age 80, right hemisphere 51.2
2772 Female, age 79, unknown 49.8
2395 Male, age 75, both hemispheres 48.9
2646 Male, age 61, right hemisphere 43.8
2567 Female, age 72, unknown 42.5
Globus pallidus, internus
nTPM: 48.1
2111 Female, age 85, right hemisphere 54.3
2287 Male, age 75, right hemisphere 53.3
2778 Female, age 91, both hemispheres 53.3
1818 Male, age 74, unknown 46.9
2037 Male, age 80, right hemisphere 45.1
2566 Female, age 72, unknown 43.1
2483 Female, age 94, right hemisphere 41.1
Nucleus accumbens
nTPM: 40.5
2824 Male, age 61, right hemisphere 49.6
2391 Female, age 94, left hemisphere 45.2
2698 Female, age 72, unknown 44.2
2286 Male, age 75, left hemisphere 43.8
1806 Female, age 85, left hemisphere 37.7
1783 Male, age 74, unknown 37.2
1856 Female, age 91, right hemisphere 37.1
2732 Male, age 80, right hemisphere 29.2
Nucleus basalis of Meynert
nTPM: 38.2
2569 Male, age 61, both hemispheres 40.3
2393 Male, age 80, right hemisphere 38.2
2484 Female, age 94, left hemisphere 37.6
2821 Male, age 75, both hemispheres 36.5
Nucleus of the diagonal band
nTPM: 22.0
1812 Female, age 91, both hemispheres 25.1
1979 Male, age 74, unknown 22.3
2775 Male, age 80, right hemisphere 21.2
2029 Male, age 61, right hemisphere 21.1
2195 Female, age 85, both hemispheres 20.5
Putamen
nTPM: 37.0
2482 Female, age 94, left hemisphere 43.6
1829 Male, age 74, unknown 41.7
1838 Male, age 80, right hemisphere 40.0
1937 Female, age 91, right hemisphere 37.3
2466 Female, age 79, unknown 33.6
2489 Female, age 72, unknown 33.2
2647 Male, age 75, left hemisphere 29.6
Septal nuclei
nTPM: 24.1
2394 Male, age 61, left hemisphere 29.8
2629 Female, age 94, right hemisphere 27.5
2199 Male, age 80, right hemisphere 26.3
2009 Female, age 91, both hemispheres 22.9
2059 Female, age 85, both hemispheres 22.3
2031 Female, age 72, unknown 20.9
1960 Male, age 74, unknown 19.0
Stria terminalis, bed nucleus
nTPM: 26.3
2201 Male, age 74, unknown 27.7
1974 Female, age 91, both hemispheres 25.9
2486 Female, age 94, both hemispheres 25.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 14.3
Samples: 246

Max nTPM: 29.5
Min nTPM: 6.2
Std nTPM: 3.3
Median nTPM: 13.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 29.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 26.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 26.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 25.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 25.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 22.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 22.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 22.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 21.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 21.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 21.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 21.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 20.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 20.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 20.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 19.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 19.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 19.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 19.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 18.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 18.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 18.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 18.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 18.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 18.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 17.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 17.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 17.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 17.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 17.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 17.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 17.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 17.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 17.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 17.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 17.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 17.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 17.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 17.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 17.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 17.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 17.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 17.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 16.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 16.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 16.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 16.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 16.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 16.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 16.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 16.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 16.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 16.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 16.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 16.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 16.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 16.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 16.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 15.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 15.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 15.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 15.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 15.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 15.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 15.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 15.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 15.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 15.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 15.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 15.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 15.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 15.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 15.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 15.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 15.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 15.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 15.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 15.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 15.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 15.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 15.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 14.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 14.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 14.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 14.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 14.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 14.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 14.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 14.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 14.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 14.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 14.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 14.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 14.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 14.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 14.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 14.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 14.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 14.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 14.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 14.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 14.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 14.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 14.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 14.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 14.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 14.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 14.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 14.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 14.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 14.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 14.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 14.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 14.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 14.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 14.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 13.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 13.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 13.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 13.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 13.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 13.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 13.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 13.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 13.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 13.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 13.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 13.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 13.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 13.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 13.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 13.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 13.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 13.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 13.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 13.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 13.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 13.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 13.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 13.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 13.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 13.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 13.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 13.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 13.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 13.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 13.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 13.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 13.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 13.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 13.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 13.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 13.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 13.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 13.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 13.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 13.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 13.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 12.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 12.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 12.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 12.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 12.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 12.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 12.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 12.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 12.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 12.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 12.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 12.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 12.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 12.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 12.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 12.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 12.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 12.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 12.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 12.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 12.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 12.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 12.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 12.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 12.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 12.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 12.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 12.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 12.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 12.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 12.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 11.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 11.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 11.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 11.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 11.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 11.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 11.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 11.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 11.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 11.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 11.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 11.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 11.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 11.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 11.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 11.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 11.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 11.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 11.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 11.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 11.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 11.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 11.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 11.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 11.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 11.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 10.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 10.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 10.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 10.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 10.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 10.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 10.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 10.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 10.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 10.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 10.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 10.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 10.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 10.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 10.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 9.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 9.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 9.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 9.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 9.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 9.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 9.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 9.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 9.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 9.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 9.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 8.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 8.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 8.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 7.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 6.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 12.8
Samples: 246

Max nTPM: 38.5
Min nTPM: 3.8
Std nTPM: 3.7
Median nTPM: 12.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 38.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 24.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 22.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 22.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 21.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 21.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 20.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 19.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 19.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 19.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 19.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 19.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 19.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 19.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 18.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 18.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 18.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 18.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 18.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 17.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 17.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 17.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 17.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 17.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 17.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 17.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 17.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 17.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 17.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 16.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 16.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 16.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 16.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 16.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 15.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 15.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 15.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 15.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 15.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 15.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 15.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 15.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 15.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 15.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 15.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 15.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 15.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 15.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 14.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 14.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 14.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 14.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 14.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 14.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 14.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 14.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 14.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 14.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 14.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 14.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 14.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 14.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 14.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 14.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 14.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 14.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 14.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 14.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 14.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 14.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 14.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 14.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 14.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 14.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 13.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 13.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 13.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 13.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 13.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 13.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 13.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 13.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 13.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 13.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 13.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 13.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 13.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 13.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 13.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 13.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 13.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 13.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 13.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 13.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 13.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 13.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 13.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 13.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 13.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 13.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 13.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 13.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 13.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 13.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 13.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 13.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 12.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 12.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 12.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 12.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 12.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 12.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 12.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 12.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 12.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 12.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 12.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 12.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 12.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 12.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 12.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 12.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 12.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 12.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 12.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 12.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 12.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 12.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 12.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 12.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 12.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 12.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 12.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 12.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 12.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 12.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 12.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 12.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 12.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 11.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 11.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 11.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 11.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 11.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 11.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 11.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 11.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 11.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 11.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 11.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 11.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 11.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 11.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 11.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 11.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 11.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 11.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 11.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 11.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 11.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 11.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 11.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 11.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 11.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 11.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 11.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 11.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 11.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 11.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 11.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 11.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 10.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 10.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 10.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 10.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 10.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 10.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 10.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 10.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 10.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 10.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 10.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 10.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 10.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 10.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 10.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 10.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 10.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 10.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 10.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 10.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 10.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 10.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 10.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 10.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 10.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 10.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 10.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 10.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 10.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 9.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 9.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 9.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 9.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 9.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 9.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 9.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 9.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 9.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 9.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 9.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 9.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 9.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 9.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 9.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 9.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 8.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 8.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 8.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 8.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 8.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 8.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 8.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 8.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 8.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 8.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 8.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 8.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 8.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 7.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 7.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 7.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 7.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 7.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 7.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 7.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 6.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 6.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 6.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 6.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 6.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 5.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 5.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 5.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 4.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 3.8
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Brain - Putamen (basal ganglia)
Average nTPM: 14.9
Samples: 205

Max nTPM: 26.3
Min nTPM: 9.2
Std nTPM: 3.0
Median nTPM: 14.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 26.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 25.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 24.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 23.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 22.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 20.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 20.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 20.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 20.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 20.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 20.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 20.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 20.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 19.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 19.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 19.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 19.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 18.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 18.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 18.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 18.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 18.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 18.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 18.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 18.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 18.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 18.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 17.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 17.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 17.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 17.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 17.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 17.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 17.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 17.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 17.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 17.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 17.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 17.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 17.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 17.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 17.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 17.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 17.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 16.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 16.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 16.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 16.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 16.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 16.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 16.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 16.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 16.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 16.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 16.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 16.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 16.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 16.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 16.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 16.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 16.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 16.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 16.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 16.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 16.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 16.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 16.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 16.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 16.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 16.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 16.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 16.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 16.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 15.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 15.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 15.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 15.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 15.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 15.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 15.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 15.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 15.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 15.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 15.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 15.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 15.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 15.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 15.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 15.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 15.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 15.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 15.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 15.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 15.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 14.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 14.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 14.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 14.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 14.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 14.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 14.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 14.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 14.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 14.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 14.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 14.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 14.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 14.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 14.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 14.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 14.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 14.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 14.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 14.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 14.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 14.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 14.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 14.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 13.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 13.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 13.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 13.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 13.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 13.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 13.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 13.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 13.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 13.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 13.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 13.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 13.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 13.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 13.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 13.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 13.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 13.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 13.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 13.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 13.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 13.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 13.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 13.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 13.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 13.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 13.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 13.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 13.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 13.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 13.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 12.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 12.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 12.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 12.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 12.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 12.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 12.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 12.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 12.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 12.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 12.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 12.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 12.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 12.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 12.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 12.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 12.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 12.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 12.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 12.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 12.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 12.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 11.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 11.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 11.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 11.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 11.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 11.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 11.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 11.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 11.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 11.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 11.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 11.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 11.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 11.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 11.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 11.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 11.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 11.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 11.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 11.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 10.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 10.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 10.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 10.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 10.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 10.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 10.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 10.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 10.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 9.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 9.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 9.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 9.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 9.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

49.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 43.1
FF:10164-103B2 76 years, female 43.1
Nucleus accumbens
Scaled Tags Per Million: 41.9
FF:10037-101F1 23-56 years, mixed 41.9
Putamen
Scaled Tags Per Million: 38.9
FF:10176-103C5 60 years, female 38.9
Globus pallidus
Scaled Tags Per Million: 49.2
FF:10161-103A8 76 years, female 52.2
FF:10175-103C4 60 years, female 46.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.3
Pig sample Sample description nTPM
Caudate
nTPM: 11.9
Samples: 4

Max nTPM: 12.8
Min nTPM: 10.8
Sample A Female 11.5
Sample B Female 10.8
Sample C Male 12.8
Sample D Male 12.3
Putamen
nTPM: 19.3
Samples: 4

Max nTPM: 25.3
Min nTPM: 12.5
Sample A Female 25.3
Sample B Female 12.5
Sample C Male 19.3
Sample D Male 20.1
Septum
nTPM: 15.1
Samples: 4

Max nTPM: 18.0
Min nTPM: 13.0
Sample A Female 14.1
Sample B Female 13.0
Sample C Male 18.0
Sample D Male 15.2
Ventral pallidum
nTPM: 18.9
Samples: 4

Max nTPM: 24.4
Min nTPM: 11.2
Sample A Female 11.2
Sample B Female 17.9
Sample C Male 24.4
Sample D Male 22.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 40.4
Samples: 4

Max nTPM: 42.9
Min nTPM: 37.7
Sample A Male 42.9
Sample B Male 41.8
Sample C Female 39.2
Sample D Female 37.7
Septum
nTPM: 35.0
Samples: 4

Max nTPM: 38.2
Min nTPM: 32.0
Sample A Male 32.0
Sample B Male 38.2
Sample C Female 34.4
Sample D Female 35.4
Ventral forebrain
nTPM: 36.0
Samples: 4

Max nTPM: 37.7
Min nTPM: 33.8
Sample A Male 37.0
Sample B Male 35.6
Sample C Female 33.8
Sample D Female 37.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.6
68410303 Antisense, RP_041214_01_F05, Mouse strain C57BL/6J (56 days, male) 5.6
Pallidum
Expression energy: 5.0
68410303 Antisense, RP_041214_01_F05, Mouse strain C57BL/6J (56 days, male) 5.0

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