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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: High
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: High
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Low
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Medium
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: High
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:46.4 nTPM
HPA Brain:13.2 nTPM
GTEx:46.4 nTPM
FANTOM5:54.9 Scaled Tags Per Million
Pig:18.2 nTPM
Mouse:28.5 nTPM
Allen mouse:1.5 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA061463
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus High
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus High
Purkinje cells - cytoplasm/membrane Not detected
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus High
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Low
Molecular layer - neuropil Not detected
Molecular layer cells - cytoplasm/membrane Not detected
Molecular layer cells - nucleus Medium
Processes in granular layer Not detected
Processes in molecular layer Not detected
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Not detected
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Medium



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.2
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 8.6
2055 Female, age 91, right hemisphere 12.3
2003 Female, age 85, right hemisphere 10.2
2006 Male, age 61, right hemisphere 9.6
1769 Male, age 76, right hemisphere 9.1
1788 Male, age 55, unknown 8.7
1774 Male, age 80, left hemisphere 7.9
2101 Male, age 74, right hemisphere 7.0
1768 Female, age 72, unknown 4.1
Cerebellar nuclei
nTPM: 13.2
1879 Male, age 55, unknown 17.7
1871 Male, age 74, unknown 16.9
2783 Female, age 72, unknown 14.6
2175 Male, age 61, right hemisphere 13.3
2882 Male, age 76, left hemisphere 12.7
2318 Male, age 74, left hemisphere 12.6
2005 Male, age 80, left hemisphere 12.4
1966 Female, age 91, left hemisphere 9.8
2177 Female, age 85, both hemispheres 9.2
Flocculonodular lobe
nTPM: 7.0
2004 Male, age 61, right hemisphere 10.1
2176 Female, age 91, right hemisphere 9.0
1792 Male, age 74, unknown 8.2
1835 Female, age 85, right hemisphere 6.7
1771 Male, age 80, left hemisphere 5.8
1765 Male, age 55, unknown 4.8
1767 Male, age 76, left hemisphere 4.2
Vermis
nTPM: 8.0
1988 Female, age 85, left hemisphere 11.6
1928 Female, age 72, unknown 10.9
2834 Male, age 80, left hemisphere 10.7
2460 Male, age 61, both hemispheres 9.0
1766 Male, age 55, unknown 6.8
1825 Male, age 74, unknown 6.8
1751 Male, age 74, right hemisphere 6.7
1770 Male, age 76, left hemisphere 5.5
1778 Female, age 91, left hemisphere 3.9

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.4
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 42.9
Samples: 215

Max nTPM: 77.4
Min nTPM: 15.3
Std nTPM: 11.6
Median nTPM: 41.1
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 77.4
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 76.9
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 75.8
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 75.4
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 74.9
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 73.1
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 72.9
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 72.7
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 67.3
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 66.5
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 65.5
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 64.7
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 64.5
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 64.0
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 63.9
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 63.3
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 62.5
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 62.1
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 60.9
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 60.6
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 60.4
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 58.0
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 57.6
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 57.1
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 56.2
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 56.2
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 55.1
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 55.1
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 54.8
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 54.7
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 54.0
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 53.4
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 53.2
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 53.2
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 53.1
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 52.7
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 52.6
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 52.6
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 52.5
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 52.3
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 52.3
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 52.2
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 52.2
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 52.0
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 51.5
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 51.3
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 51.2
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 50.6
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 50.5
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 50.3
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 50.2
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 50.1
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 50.0
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 50.0
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 49.9
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 49.8
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 49.7
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 49.3
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 48.9
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 48.6
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 48.2
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 48.0
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 47.8
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 47.7
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 47.6
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 47.5
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 47.5
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 47.4
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 47.2
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 47.1
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 47.1
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 46.7
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 46.7
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 46.3
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 46.3
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 45.5
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 45.4
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 45.2
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 45.1
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 45.1
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 45.0
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 44.6
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 44.2
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 44.0
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 43.9
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 43.8
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 43.7
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 43.6
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 43.3
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 43.3
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 42.8
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 42.8
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 42.5
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 42.3
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 42.1
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 42.1
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 42.0
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 42.0
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 42.0
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 41.9
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 41.7
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 41.6
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 41.5
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 41.4
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 41.4
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 41.3
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 41.1
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 41.1
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 41.0
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 41.0
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 41.0
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 40.8
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 40.6
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 40.4
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 40.2
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 40.0
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 40.0
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 39.8
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 39.8
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 39.5
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 39.5
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 39.4
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 39.4
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 39.3
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 39.0
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 39.0
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 38.9
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 38.8
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 38.7
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 38.7
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 38.7
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 38.6
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 38.4
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 38.3
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 38.1
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 38.0
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 37.7
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 37.6
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 37.4
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 37.3
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 37.2
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 37.1
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 36.8
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 36.7
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 36.5
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 36.0
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 35.9
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 35.9
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 35.9
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 35.7
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 35.4
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 35.2
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 35.2
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 35.1
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 35.0
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 34.8
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 34.8
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 34.8
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 34.7
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 34.7
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 34.5
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 34.4
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 34.4
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 34.4
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 34.3
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 34.2
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 34.2
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 34.2
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 34.1
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 33.8
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 33.5
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 33.4
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 33.4
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 33.3
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 33.1
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 32.9
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 32.6
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 32.5
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 32.5
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 32.3
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 32.1
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 32.0
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 31.9
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 31.6
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 31.4
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 31.4
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 31.3
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 31.3
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 31.2
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 31.1
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 30.7
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 30.4
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 30.4
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 29.8
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 29.5
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 29.2
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 29.1
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 29.0
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 28.6
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 28.6
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 28.6
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 28.5
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 28.4
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 28.4
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 27.8
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 27.4
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 27.3
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 26.8
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 26.6
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 25.9
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 25.5
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 25.1
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 22.1
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 20.4
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 15.3
Show allShow less
Brain - Cerebellum
Average nTPM: 46.4
Samples: 241

Max nTPM: 73.3
Min nTPM: 20.5
Std nTPM: 7.9
Median nTPM: 46.0
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 73.3
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 67.7
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 67.7
GTEX-11EI6-2926-SM-5985U 60-69 years, male 66.4
GTEX-X261-3126-SM-4PQZC 50-59 years, male 63.6
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 63.1
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 62.9
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 62.8
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 62.4
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 62.2
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 61.2
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 61.1
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 61.0
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 60.9
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 59.9
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 59.7
GTEX-14E6D-2926-SM-664OP 50-59 years, male 58.9
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 58.7
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 58.1
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 57.5
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 57.4
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 57.1
GTEX-1192X-3226-SM-5987D 50-59 years, male 57.0
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 57.0
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 56.3
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 56.1
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 56.0
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 56.0
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 56.0
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 55.9
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 55.9
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 55.9
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 55.7
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 55.6
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 55.3
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 55.3
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 55.2
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 55.0
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 54.6
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 54.2
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 53.7
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 53.6
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 53.3
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 52.8
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 52.4
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 52.3
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 52.3
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 52.1
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 52.1
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 51.9
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 51.9
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 51.6
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 51.6
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 51.5
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 51.4
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 51.4
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 51.3
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 51.3
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 51.2
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 51.2
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 51.2
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 51.1
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 51.1
GTEX-11ONC-3026-SM-5985W 60-69 years, male 50.9
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 50.6
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 50.4
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 50.1
GTEX-17HII-2926-SM-79OMK 50-59 years, male 50.0
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 49.9
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 49.6
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 49.5
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 49.5
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 49.4
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 49.4
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 49.3
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 49.2
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 49.0
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 49.0
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 49.0
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 48.9
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 48.8
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 48.7
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 48.7
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 48.7
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 48.6
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 48.4
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 48.3
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 48.3
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 48.3
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 48.1
GTEX-14PN4-3026-SM-664O4 50-59 years, male 47.9
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 47.8
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 47.7
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 47.7
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 47.7
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 47.6
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 47.6
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 47.5
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 47.4
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 47.4
GTEX-12126-0926-SM-5FQTW 20-29 years, male 47.3
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 47.3
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 47.3
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 47.3
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 47.2
GTEX-11DYG-2926-SM-5H132 60-69 years, male 47.1
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 47.1
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 47.1
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 47.1
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 47.1
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 47.0
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 47.0
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 46.9
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 46.8
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 46.7
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 46.5
GTEX-145LS-3026-SM-5O99S 60-69 years, female 46.3
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 46.2
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 46.2
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 46.2
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 46.0
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 46.0
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 46.0
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 46.0
GTEX-144GL-2926-SM-5O99F 50-59 years, male 45.8
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 45.8
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 45.7
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 45.7
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 45.7
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 45.6
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 45.6
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 45.5
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 45.2
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 45.1
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 45.1
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 45.0
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 45.0
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 45.0
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 44.9
GTEX-15G19-2826-SM-6M48K 60-69 years, male 44.9
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 44.8
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 44.7
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 44.7
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 44.7
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 44.5
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 44.4
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 44.3
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 44.2
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 44.1
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 43.9
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 43.9
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 43.8
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 43.8
GTEX-14ABY-3026-SM-664NE 50-59 years, male 43.5
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 43.5
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 43.4
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 43.4
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 43.4
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 43.3
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 43.3
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 43.3
GTEX-WL46-2826-SM-3LK81 50-59 years, male 42.9
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 42.8
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 42.8
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 42.8
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 42.7
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 42.7
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 42.5
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 42.5
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 42.3
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 42.2
GTEX-17EVP-2926-SM-793BU 40-49 years, male 42.1
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 42.1
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 42.1
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 42.0
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 41.9
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 41.8
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 41.8
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 41.6
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 41.4
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 41.3
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 41.3
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 41.2
GTEX-13112-2926-SM-5DUWT 50-59 years, male 41.1
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 40.8
GTEX-1B933-3026-SM-731DB 50-59 years, female 40.8
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 40.7
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 40.6
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 40.5
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 40.5
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 40.3
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 40.2
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 40.1
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 40.0
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 40.0
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 39.9
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 39.9
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 39.9
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 39.9
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 39.7
GTEX-18465-2926-SM-7KFSE 50-59 years, male 39.6
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 39.5
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 39.2
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 39.2
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 39.2
GTEX-11NUK-3026-SM-5986K 50-59 years, male 38.9
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 38.8
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 38.7
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 38.6
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 38.4
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 37.8
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 37.7
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 37.6
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 37.5
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 37.1
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 37.0
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 36.8
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 36.8
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 36.7
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 36.7
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 36.0
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 35.3
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 35.3
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 35.2
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 34.8
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 34.6
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 34.5
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 34.3
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 34.0
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 33.2
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 33.0
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 32.8
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 32.7
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 32.2
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 31.1
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 30.2
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 29.9
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 29.6
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 29.4
GTEX-RU72-2926-SM-2TF66 50-59 years, female 26.6
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 20.5
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

54.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 54.9
FF:10166-103B4 76 years, female 64.3
FF:10083-102B2 22-68 years, mixed 45.6

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.2
Pig sample Sample description nTPM
Cerebellum
nTPM: 18.2
Samples: 4

Max nTPM: 21.2
Min nTPM: 16.8
Sample A Female 21.2
Sample B Female 16.8
Sample C Male 17.2
Sample D Male 17.5

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.5
Mouse sample Sample description nTPM
Cerebellum
nTPM: 28.5
Samples: 4

Max nTPM: 31.0
Min nTPM: 27.2
Sample A Male 31.0
Sample B Male 27.7
Sample C Female 27.2
Sample D Female 28.1

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.5
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 1.5
74822880 Antisense, RP_051130_02_E10, Mouse strain C57BL/6J (56 days, male) 1.5

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