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RAD52
HPA
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  • RAD52
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RAD52
Synonyms
Gene descriptioni

Full gene name according to HGNC.

RAD52 homolog, DNA repair protein
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband p13.33
Chromosome location (bp) 911736 - 990053
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000002016 (version 109)
Entrez gene 5893
HGNC HGNC:9824
UniProt P43351 (UniProt - Evidence at protein level)
neXtProt NX_P43351
GeneCards RAD52
Antibodypedia RAD52 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Involved in double-stranded break repair. Plays a central role in genetic recombination and DNA repair by promoting the annealing of complementary single-stranded DNA and by stimulation of the RAD51 recombinase.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

DNA-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

DNA damage, DNA recombination, DNA repair
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene shares similarity with Saccharomyces cerevisiae Rad52, a protein important for DNA double-strand break repair and homologous recombination. This gene product was shown to bind single-stranded DNA ends, and mediate the DNA-DNA interaction necessary for the annealing of complementary DNA strands. It was also found to interact with DNA recombination protein RAD51, which suggested its role in RAD51 related DNA recombination and repair. A pseudogene of this gene is present on chromosome 2. Alternative splicing results in multiple transcript variants. Additional alternatively spliced transcript variants of this gene have been described, but their full-length nature is not known. [provided by RefSeq, Jul 2014]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RAD52-202
ENSP00000351284
ENST00000358495
P43351
[Direct mapping] DNA repair protein RAD52 homolog
Show all
Q5DR82
[Target identity:100%; Query identity:100%] RAD52 homolog (S. cerevisiae), isoform CRA_c; Rhabdomyosarcoma antigen MU-RMS-40.23; cDNA FLJ77029, highly similar to Homo sapiens RAD52 homolog (S. cerevisiae) (RAD52), transcript variant alpha, mRNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000724 [double-strand break repair via homologous recombination]
GO:0000730 [DNA recombinase assembly]
GO:0003677 [DNA binding]
GO:0003697 [single-stranded DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006281 [DNA repair]
GO:0006302 [double-strand break repair]
GO:0006310 [DNA recombination]
GO:0006312 [mitotic recombination]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0010792 [DNA double-strand break processing involved in repair via single-strand annealing]
GO:0032991 [protein-containing complex]
GO:0032993 [protein-DNA complex]
GO:0034599 [cellular response to oxidative stress]
GO:0042802 [identical protein binding]
GO:0045002 [double-strand break repair via single-strand annealing]
GO:2000819 [regulation of nucleotide-excision repair]
Show all
418 aa
46.2 kDa
No 0
RAD52-203
ENSP00000380407
ENST00000397230
E9PF95
[Direct mapping] DNA repair protein RAD52 homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0006281 [DNA repair]
GO:0006310 [DNA recombination]
GO:0006974 [cellular response to DNA damage stimulus]
Show all
131 aa
14.5 kDa
No 0
RAD52-204
ENSP00000387901
ENST00000430095
P43351
[Direct mapping] DNA repair protein RAD52 homolog
Show all
Q5DR82
[Target identity:100%; Query identity:100%] RAD52 homolog (S. cerevisiae), isoform CRA_c; Rhabdomyosarcoma antigen MU-RMS-40.23; cDNA FLJ77029, highly similar to Homo sapiens RAD52 homolog (S. cerevisiae) (RAD52), transcript variant alpha, mRNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000724 [double-strand break repair via homologous recombination]
GO:0000730 [DNA recombinase assembly]
GO:0003677 [DNA binding]
GO:0003697 [single-stranded DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006281 [DNA repair]
GO:0006302 [double-strand break repair]
GO:0006310 [DNA recombination]
GO:0006312 [mitotic recombination]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0010792 [DNA double-strand break processing involved in repair via single-strand annealing]
GO:0032991 [protein-containing complex]
GO:0032993 [protein-DNA complex]
GO:0034599 [cellular response to oxidative stress]
GO:0042802 [identical protein binding]
GO:0045002 [double-strand break repair via single-strand annealing]
GO:2000819 [regulation of nucleotide-excision repair]
Show all
418 aa
46.2 kDa
No 0
RAD52-211
ENSP00000440486
ENST00000536177
F5GX32
[Direct mapping] DNA repair protein RAD52 homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0000724 [double-strand break repair via homologous recombination]
GO:0000730 [DNA recombinase assembly]
GO:0005634 [nucleus]
GO:0006281 [DNA repair]
GO:0006310 [DNA recombination]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0045002 [double-strand break repair via single-strand annealing]
Show all
301 aa
32.5 kDa
No 0
RAD52-212
ENSP00000438965
ENST00000541619
P43351
[Direct mapping] DNA repair protein RAD52 homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000724 [double-strand break repair via homologous recombination]
GO:0000730 [DNA recombinase assembly]
GO:0003677 [DNA binding]
GO:0003697 [single-stranded DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006281 [DNA repair]
GO:0006302 [double-strand break repair]
GO:0006310 [DNA recombination]
GO:0006312 [mitotic recombination]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0010792 [DNA double-strand break processing involved in repair via single-strand annealing]
GO:0032991 [protein-containing complex]
GO:0032993 [protein-DNA complex]
GO:0034599 [cellular response to oxidative stress]
GO:0042802 [identical protein binding]
GO:0045002 [double-strand break repair via single-strand annealing]
GO:2000819 [regulation of nucleotide-excision repair]
Show all
118 aa
12.9 kDa
No 0
RAD52-215
ENSP00000441073
ENST00000542785
F5GX95
[Direct mapping] DNA repair protein RAD52 homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0006281 [DNA repair]
GO:0006310 [DNA recombination]
GO:0006974 [cellular response to DNA damage stimulus]
Show all
129 aa
14 kDa
No 0
RAD52-217
ENSP00000443254
ENST00000544742
P43351
[Direct mapping] DNA repair protein RAD52 homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000724 [double-strand break repair via homologous recombination]
GO:0000730 [DNA recombinase assembly]
GO:0003677 [DNA binding]
GO:0003697 [single-stranded DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006281 [DNA repair]
GO:0006302 [double-strand break repair]
GO:0006310 [DNA recombination]
GO:0006312 [mitotic recombination]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0010792 [DNA double-strand break processing involved in repair via single-strand annealing]
GO:0032991 [protein-containing complex]
GO:0032993 [protein-DNA complex]
GO:0034599 [cellular response to oxidative stress]
GO:0042802 [identical protein binding]
GO:0045002 [double-strand break repair via single-strand annealing]
GO:2000819 [regulation of nucleotide-excision repair]
Show all
118 aa
12.9 kDa
No 0
RAD52-218
ENSP00000440268
ENST00000545564
P43351
[Direct mapping] DNA repair protein RAD52 homolog
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000724 [double-strand break repair via homologous recombination]
GO:0000730 [DNA recombinase assembly]
GO:0003677 [DNA binding]
GO:0003697 [single-stranded DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0006281 [DNA repair]
GO:0006302 [double-strand break repair]
GO:0006310 [DNA recombination]
GO:0006312 [mitotic recombination]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0010792 [DNA double-strand break processing involved in repair via single-strand annealing]
GO:0032991 [protein-containing complex]
GO:0032993 [protein-DNA complex]
GO:0034599 [cellular response to oxidative stress]
GO:0042802 [identical protein binding]
GO:0045002 [double-strand break repair via single-strand annealing]
GO:2000819 [regulation of nucleotide-excision repair]
Show all
226 aa
24.5 kDa
No 0

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