HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:43.2 nTPM
HPA Brain:59.2 nTPM
GTEx:43.2 nTPM
FANTOM5:13.2 Scaled Tags Per Million
Pig:24.1 nTPM
Mouse:17.3 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043018
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 59.2
Sample id Sample description nTPM
Hippocampus
nTPM: 53.9
2529 Female, age 94, left hemisphere 66.3
2621 Female, age 67, right hemisphere 66.1
1911 Female, age 85, right hemisphere 52.0
2148 Female, age 91, left hemisphere 50.8
1898 Male, age 80, left hemisphere 49.7
1855 Male, age 76, left hemisphere 38.7
Dentate gyrus
nTPM: 44.8
2530 Female, age 94, left hemisphere 52.4
2246 Female, age 85, both hemispheres 49.1
2531 Female, age 67, both hemispheres 46.8
1927 Female, age 91, both hemispheres 45.7
2528 Male, age 74, both hemispheres 43.1
2010 Male, age 76, both hemispheres 31.7
Entorhinal gyrus
nTPM: 57.4
2613 Female, age 94, left hemisphere 81.6
1938 Female, age 85, left hemisphere 58.1
2686 Male, age 75, right hemisphere 58.0
1787 Male, age 76, left hemisphere 55.0
2764 Male, age 80, right hemisphere 54.7
2117 Female, age 91, right hemisphere 36.9
Hippocampus, CA1
nTPM: 43.8
2749 Male, age 80, left hemisphere 63.5
2527 Male, age 74, both hemispheres 48.8
1873 Female, age 85, both hemispheres 42.5
2082 Female, age 91, right hemisphere 42.4
2045 Male, age 76, both hemispheres 22.1
Hippocampus, CA2
nTPM: 52.0
2437 Female, age 94, left hemisphere 64.1
1940 Female, age 85, left hemisphere 59.5
1963 Male, age 80, left hemisphere 53.7
2113 Female, age 91, right hemisphere 48.7
1892 Male, age 76, both hemispheres 45.1
2249 Male, age 74, both hemispheres 41.2
Hippocampus, CA3
nTPM: 48.4
2861 Female, age 67, both hemispheres 65.1
2137 Male, age 80, left hemisphere 63.0
1891 Female, age 85, both hemispheres 43.4
2620 Female, age 94, left hemisphere 41.0
1867 Male, age 76, both hemispheres 40.0
2436 Male, age 74, both hemispheres 38.0
Parahippocampal cortex
nTPM: 59.2
2622 Female, age 67, right hemisphere 80.8
2245 Female, age 91, both hemispheres 72.8
2250 Female, age 67, right hemisphere 63.4
2692 Male, age 74, both hemispheres 59.8
2693 Female, age 94, both hemispheres 58.7
1933 Female, age 85, both hemispheres 56.1
1990 Female, age 91, right hemisphere 55.8
2532 Female, age 72, left hemisphere 55.4
1850 Male, age 80, both hemispheres 50.1
2018 Male, age 76, both hemispheres 39.1
Perirhinal gyrus
nTPM: 56.5
2521 Female, age 94, right hemisphere 70.3
1847 Female, age 91, left hemisphere 62.0
1841 Female, age 85, right hemisphere 57.5
1794 Male, age 80, right hemisphere 57.0
2848 Male, age 76, right hemisphere 35.7
Subiculum
nTPM: 48.4
2438 Female, age 94, left hemisphere 64.7
2619 Male, age 74, both hemispheres 61.2
1977 Female, age 85, both hemispheres 50.3
1901 Male, age 80, both hemispheres 47.0
2729 Female, age 91, right hemisphere 36.3
2042 Male, age 76, both hemispheres 30.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 43.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.2
Samples: 197

Max nTPM: 138.9
Min nTPM: 8.1
Std nTPM: 23.9
Median nTPM: 38.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 138.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 124.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 119.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 107.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 105.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 100.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 98.5
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 95.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 94.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 89.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 89.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 13.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.2
FF:10153-102I9 76 years, female 14.0
FF:10169-103B7 60 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 24.1
Pig sample Sample description nTPM
Subiculum
nTPM: 23.5
Samples: 4

Max nTPM: 30.4
Min nTPM: 17.8
Sample A Female 30.4
Sample B Female 22.3
Sample C Male 23.6
Sample D Male 17.8
Dorsal hippocampus
nTPM: 21.7
Samples: 4

Max nTPM: 27.4
Min nTPM: 15.2
Sample A Female 27.4
Sample B Female 22.4
Sample C Male 21.8
Sample D Male 15.2
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 27.5
Min nTPM: 22.1
Sample A Female 22.1
Sample B Female 24.8
Sample C Male 27.5
Sample D Male 22.1
Ventral hippocampus
nTPM: 23.9
Samples: 4

Max nTPM: 30.6
Min nTPM: 19.1
Sample A Female 19.1
Sample B Female 19.9
Sample C Male 30.6
Sample D Male 26.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 17.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.3
Samples: 4

Max nTPM: 20.5
Min nTPM: 14.5
Sample A Male 14.5
Sample B Male 16.9
Sample C Female 17.3
Sample D Female 20.5
Hippocampal formation
nTPM: 12.8
Samples: 4

Max nTPM: 15.4
Min nTPM: 10.1
Sample A Male 15.4
Sample B Male 11.2
Sample C Female 10.1
Sample D Female 14.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68745251 Antisense, RP_050210_01_E10, Mouse strain C57BL/6J (56 days, male) 0.3

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