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FKBP4
HPA
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  • FKBP4
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

FKBP4
Synonyms FKBP52, FKBP59
Gene descriptioni

Full gene name according to HGNC.

FKBP prolyl isomerase 4
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband p13.33
Chromosome location (bp) 2794970 - 2805423
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000004478 (version 109)
Entrez gene 2288
HGNC HGNC:3720
UniProt Q02790 (UniProt - Evidence at protein level)
neXtProt NX_Q02790
GeneCards FKBP4
Antibodypedia FKBP4 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Immunophilin protein with PPIase and co-chaperone activities. Component of steroid receptors heterocomplexes through interaction with heat-shock protein 90 (HSP90). May play a role in the intracellular trafficking of heterooligomeric forms of steroid hormone receptors between cytoplasm and nuclear compartments. The isomerase activity controls neuronal growth cones via regulation of TRPC1 channel opening. Acts also as a regulator of microtubule dynamics by inhibiting MAPT/TAU ability to promote microtubule assembly. May have a protective role against oxidative stress in mitochondria.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Chaperone, Isomerase, Rotamase
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a member of the immunophilin protein family, which play a role in immunoregulation and basic cellular processes involving protein folding and trafficking. This encoded protein is a cis-trans prolyl isomerase that binds to the immunosuppressants FK506 and rapamycin. It has high structural and functional similarity to FK506-binding protein 1A (FKBP1A), but unlike FKBP1A, this protein does not have immunosuppressant activity when complexed with FK506. It interacts with interferon regulatory factor-4 and plays an important role in immunoregulatory gene expression in B and T lymphocytes. This encoded protein is known to associate with phytanoyl-CoA alpha-hydroxylase. It can also associate with two heat shock proteins (hsp90 and hsp70) and thus may play a role in the intracellular trafficking of hetero-oligomeric forms of the steroid hormone receptors. This protein correlates strongly with adeno-associated virus type 2 vectors (AAV) resulting in a significant increase in AAV-mediated transgene expression in human cell lines. Thus this encoded protein is thought to have important implications for the optimal use of AAV vectors in human gene therapy. The human genome contains several non-transcribed pseudogenes similar to this gene. [provided by RefSeq, Sep 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
FKBP4-201
ENSP00000001008
ENST00000001008
Q02790
[Direct mapping] Peptidyl-prolyl cis-trans isomerase FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed
Show all
Enzymes
   ENZYME proteins
   Isomerase
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000413 [protein peptidyl-prolyl isomerization]
GO:0003723 [RNA binding]
GO:0003755 [peptidyl-prolyl cis-trans isomerase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005525 [GTP binding]
GO:0005528 [FK506 binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005874 [microtubule]
GO:0006457 [protein folding]
GO:0006463 [steroid hormone receptor complex assembly]
GO:0006825 [copper ion transport]
GO:0007566 [embryo implantation]
GO:0010977 [negative regulation of neuron projection development]
GO:0016853 [isomerase activity]
GO:0030424 [axon]
GO:0030521 [androgen receptor signaling pathway]
GO:0030674 [protein-macromolecule adaptor activity]
GO:0030850 [prostate gland development]
GO:0031072 [heat shock protein binding]
GO:0031111 [negative regulation of microtubule polymerization or depolymerization]
GO:0031115 [negative regulation of microtubule polymerization]
GO:0031503 [protein-containing complex localization]
GO:0032767 [copper-dependent protein binding]
GO:0032991 [protein-containing complex]
GO:0035259 [nuclear glucocorticoid receptor binding]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0043025 [neuronal cell body]
GO:0044295 [axonal growth cone]
GO:0046661 [male sex differentiation]
GO:0048156 [tau protein binding]
GO:0048471 [perinuclear region of cytoplasm]
GO:0048608 [reproductive structure development]
GO:0051219 [phosphoprotein binding]
GO:0061077 [chaperone-mediated protein folding]
GO:0070062 [extracellular exosome]
Show all
459 aa
51.8 kDa
No 0
FKBP4-202
ENSP00000446368
ENST00000538622
F5H1U3
[Direct mapping] Peptidylprolyl isomerase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000413 [protein peptidyl-prolyl isomerization]
GO:0003755 [peptidyl-prolyl cis-trans isomerase activity]
GO:0005528 [FK506 binding]
GO:0016853 [isomerase activity]
GO:0031072 [heat shock protein binding]
Show all
86 aa
9.5 kDa
No 0
FKBP4-203
ENSP00000438491
ENST00000539181
H0YFG2
[Direct mapping] Peptidyl-prolyl cis-trans isomerase FKBP4
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000413 [protein peptidyl-prolyl isomerization]
GO:0003755 [peptidyl-prolyl cis-trans isomerase activity]
GO:0005515 [protein binding]
GO:0005528 [FK506 binding]
GO:0031072 [heat shock protein binding]
Show all
84 aa
9.5 kDa
No 0
FKBP4-207
ENSP00000442193
ENST00000544366
H0YG86
[Direct mapping] Peptidyl-prolyl cis-trans isomerase FKBP4
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
23 aa
2.5 kDa
No 0
FKBP4-208
ENSP00000486800
ENST00000630279
F5H120
[Direct mapping] Peptidyl-prolyl cis-trans isomerase FKBP4
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
51 aa
5.5 kDa
No 0

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