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CALCR
HPA
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PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CALCR
Synonyms CT-R, CTR
Gene descriptioni

Full gene name according to HGNC.

Calcitonin receptor
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 7
Cytoband q21.3
Chromosome location (bp) 93424486 - 93574730
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000004948 (version 109)
Entrez gene 799
HGNC HGNC:1440
UniProt
neXtProt
GeneCards CALCR
Antibodypedia CALCR antibodies


PROTEIN FUNCTION
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a high affinity receptor for the peptide hormone calcitonin and belongs to a subfamily of seven transmembrane-spanning G protein-coupled receptors. The encoded protein is involved in maintaining calcium homeostasis and in regulating osteoclast-mediated bone resorption. Polymorphisms in this gene have been associated with variations in bone mineral density and onset of osteoporosis. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Sep 2009]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CALCR-201
ENSP00000377959
ENST00000394441
A0A0C4DG16
[Direct mapping] Calcitonin receptor
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   GPCRHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Human disease related genes
   Musculoskeletal diseases
   Skeletal diseases
   DeepTMHMM predicted membrane proteins
Show all
GO:0004888 [transmembrane signaling receptor activity]
GO:0004930 [G protein-coupled receptor activity]
GO:0004948 [calcitonin receptor activity]
GO:0007166 [cell surface receptor signaling pathway]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
Show all
474 aa
55.3 kDa
Yes 7
CALCR-204
ENSP00000389295
ENST00000426151
A0A0C4DG16
[Direct mapping] Calcitonin receptor
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   GPCRHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Human disease related genes
   Musculoskeletal diseases
   Skeletal diseases
   DeepTMHMM predicted membrane proteins
Show all
GO:0004888 [transmembrane signaling receptor activity]
GO:0004930 [G protein-coupled receptor activity]
GO:0004948 [calcitonin receptor activity]
GO:0007166 [cell surface receptor signaling pathway]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
Show all
474 aa
55.3 kDa
Yes 7
CALCR-205
ENSP00000497687
ENST00000649521
A0A0A0MSQ7
[Direct mapping] Calcitonin receptor
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   GPCRHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Human disease related genes
   Musculoskeletal diseases
   Skeletal diseases
   DeepTMHMM predicted membrane proteins
Show all
GO:0004888 [transmembrane signaling receptor activity]
GO:0004930 [G protein-coupled receptor activity]
GO:0004948 [calcitonin receptor activity]
GO:0005886 [plasma membrane]
GO:0007166 [cell surface receptor signaling pathway]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0007188 [adenylate cyclase-modulating G protein-coupled receptor signaling pathway]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
Show all
490 aa
57.3 kDa
Yes 7

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