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SLC25A5
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  • SLC25A5
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:168.7 nTPM
FANTOM5:103.8 Scaled Tags Per Million
Pig:102.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA071684
Glial cells Low
Neuronal cells Low

CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

168.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 168.7
Samples: 246

Max nTPM: 473.4
Min nTPM: 84.3
Std nTPM: 42.9
Median nTPM: 165.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 473.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 324.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 293.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 286.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 265.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 264.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 255.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 254.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 252.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 245.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 238.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 237.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 237.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 237.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 237.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 235.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 235.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 230.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 230.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 227.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 224.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 223.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 216.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 214.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 214.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 213.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 212.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 211.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 210.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 210.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 210.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 209.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 208.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 207.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 205.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 204.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 203.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 203.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 202.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 201.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 201.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 201.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 200.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 200.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 199.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 198.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 198.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 197.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 197.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 197.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 197.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 195.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 195.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 194.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 194.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 193.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 192.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 191.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 191.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 191.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 190.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 190.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 189.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 189.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 189.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 188.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 188.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 188.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 187.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 187.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 187.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 186.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 186.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 184.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 184.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 183.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 182.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 182.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 181.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 181.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 180.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 179.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 179.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 179.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 179.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 177.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 177.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 177.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 177.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 176.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 176.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 176.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 176.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 175.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 175.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 175.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 175.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 174.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 173.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 173.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 173.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 173.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 173.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 172.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 171.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 170.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 170.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 169.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 169.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 168.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 168.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 167.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 167.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 167.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 167.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 167.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 167.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 166.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 166.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 166.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 166.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 165.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 165.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 164.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 164.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 164.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 162.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 162.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 162.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 162.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 162.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 161.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 160.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 160.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 160.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 160.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 159.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 159.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 158.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 158.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 158.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 158.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 157.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 156.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 156.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 156.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 155.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 154.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 153.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 152.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 152.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 152.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 151.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 151.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 151.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 150.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 150.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 149.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 149.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 149.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 149.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 149.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 148.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 148.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 147.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 147.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 146.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 145.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 145.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 145.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 144.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 144.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 144.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 143.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 142.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 142.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 142.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 142.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 141.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 141.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 141.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 141.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 141.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 141.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 140.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 140.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 140.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 140.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 140.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 140.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 139.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 138.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 138.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 137.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 137.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 137.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 136.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 136.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 136.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 135.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 134.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 134.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 134.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 133.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 132.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 132.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 132.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 132.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 131.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 131.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 131.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 129.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 128.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 127.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 126.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 126.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 126.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 124.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 123.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 122.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 121.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 121.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 121.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 120.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 119.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 118.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 116.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 115.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 115.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 114.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 114.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 114.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 112.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 110.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 109.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 107.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 107.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 106.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 106.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 105.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 98.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 97.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 96.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 95.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 93.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 84.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

103.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 103.8
FF:10164-103B2 76 years, female 103.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.0
Pig sample Sample description nTPM
Caudate
nTPM: 102.0
Samples: 4

Max nTPM: 125.7
Min nTPM: 77.4
Sample A Female 77.4
Sample B Female 107.2
Sample C Male 125.7
Sample D Male 97.5

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