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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:229.7 nTPM
HPA Brain:66.8 nTPM
GTEx:229.7 nTPM
FANTOM5:179.6 Scaled Tags Per Million
Pig:511.9 nTPM
Mouse:560.0 nTPM
Allen mouse:9.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA014429
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 66.8
2290 Female, age 72, unknown 112.2
1854 Male, age 80, left hemisphere 83.5
2846 Female, age 79, unknown 67.7
2289 Male, age 61, right hemisphere 67.2
2288 Male, age 75, left hemisphere 66.8
1857 Female, age 85, left hemisphere 56.4
2481 Female, age 94, left hemisphere 41.1
1781 Male, age 74, unknown 39.7
Globus pallidus, externus
nTPM: 5.1
2646 Male, age 61, right hemisphere 10.7
2395 Male, age 75, both hemispheres 8.3
2772 Female, age 79, unknown 3.1
1996 Male, age 80, right hemisphere 2.1
2567 Female, age 72, unknown 1.4
Globus pallidus, internus
nTPM: 4.2
2483 Female, age 94, right hemisphere 16.1
2287 Male, age 75, right hemisphere 3.9
2566 Female, age 72, unknown 2.8
1818 Male, age 74, unknown 2.4
2037 Male, age 80, right hemisphere 2.4
2778 Female, age 91, both hemispheres 1.6
2111 Female, age 85, right hemisphere 0.4
Nucleus accumbens
nTPM: 52.6
1856 Female, age 91, right hemisphere 102.2
1783 Male, age 74, unknown 69.6
2824 Male, age 61, right hemisphere 58.9
2286 Male, age 75, left hemisphere 53.1
1806 Female, age 85, left hemisphere 49.9
2698 Female, age 72, unknown 46.6
2391 Female, age 94, left hemisphere 22.5
2732 Male, age 80, right hemisphere 17.9
Nucleus basalis of Meynert
nTPM: 50.9
2393 Male, age 80, right hemisphere 88.3
2484 Female, age 94, left hemisphere 69.2
2821 Male, age 75, both hemispheres 36.1
2569 Male, age 61, both hemispheres 10.0
Nucleus of the diagonal band
nTPM: 8.1
1812 Female, age 91, both hemispheres 12.1
2775 Male, age 80, right hemisphere 9.7
1979 Male, age 74, unknown 8.8
2195 Female, age 85, both hemispheres 6.2
2029 Male, age 61, right hemisphere 3.5
Putamen
nTPM: 59.4
1937 Female, age 91, right hemisphere 89.2
1829 Male, age 74, unknown 83.3
2466 Female, age 79, unknown 79.9
1838 Male, age 80, right hemisphere 70.4
2489 Female, age 72, unknown 33.4
2647 Male, age 75, left hemisphere 31.6
2482 Female, age 94, left hemisphere 28.3
Septal nuclei
nTPM: 7.3
1960 Male, age 74, unknown 13.2
2031 Female, age 72, unknown 10.3
2009 Female, age 91, both hemispheres 7.1
2629 Female, age 94, right hemisphere 6.9
2394 Male, age 61, left hemisphere 6.4
2059 Female, age 85, both hemispheres 5.8
2199 Male, age 80, right hemisphere 1.1
Stria terminalis, bed nucleus
nTPM: 12.5
2486 Female, age 94, both hemispheres 17.9
2201 Male, age 74, unknown 12.9
1974 Female, age 91, both hemispheres 6.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

229.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 229.7
Samples: 246

Max nTPM: 1230.5
Min nTPM: 0.7
Std nTPM: 172.0
Median nTPM: 210.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1230.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 733.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 699.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 654.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 653.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 635.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 624.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 610.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 592.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 588.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 583.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 576.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 538.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 511.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 503.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 500.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 493.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 487.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 480.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 474.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 469.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 468.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 466.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 448.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 438.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 435.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 434.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 431.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 428.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 424.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 418.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 415.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 409.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 403.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 392.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 392.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 388.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 385.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 383.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 379.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 377.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 376.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 375.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 373.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 373.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 367.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 366.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 365.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 364.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 363.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 361.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 359.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 356.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 356.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 355.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 354.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 354.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 350.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 348.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 347.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 344.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 341.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 335.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 335.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 330.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 330.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 326.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 321.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 317.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 315.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 313.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 312.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 311.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 306.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 299.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 299.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 298.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 297.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 292.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 291.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 289.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 288.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 285.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 281.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 280.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 275.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 269.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 265.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 260.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 259.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 258.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 255.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 255.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 254.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 252.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 248.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 245.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 245.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 243.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 242.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 241.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 241.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 238.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 238.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 236.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 235.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 233.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 231.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 230.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 230.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 229.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 229.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 227.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 226.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 225.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 224.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 223.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 223.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 219.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 219.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 219.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 213.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 211.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 210.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 200.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 192.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 191.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 191.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 189.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 188.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 187.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 186.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 184.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 181.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 181.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 180.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 176.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 175.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 173.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 171.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 171.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 170.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 170.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 167.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 162.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 161.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 161.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 161.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 160.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 158.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 154.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 152.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 152.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 151.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 150.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 143.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 141.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 140.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 135.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 130.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 129.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 127.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 126.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 124.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 121.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 118.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 118.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 117.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 116.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 115.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 114.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 113.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 113.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 113.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 113.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 109.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 107.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 107.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 107.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 107.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 106.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 103.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 101.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 95.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 92.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 91.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 90.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 89.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 89.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 86.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 86.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 85.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 84.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 80.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 77.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 74.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 73.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 72.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 69.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 66.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 65.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 64.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 63.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 62.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 61.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 61.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 61.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 54.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 54.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 54.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 52.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 48.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 45.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 44.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 42.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 40.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 40.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 40.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 39.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 38.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 35.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 35.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 33.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 31.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 31.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 30.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 30.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 26.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 23.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 22.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 22.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 20.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 20.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 19.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 18.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 16.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 14.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 13.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 11.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 10.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 10.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 9.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 5.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 4.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 4.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 0.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 153.9
Samples: 246

Max nTPM: 1217.3
Min nTPM: 1.7
Std nTPM: 112.8
Median nTPM: 141.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 1217.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 470.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 395.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 353.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 342.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 339.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 333.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 319.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 315.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 312.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 311.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 310.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 305.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 297.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 288.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 288.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 287.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 287.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 283.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 275.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 273.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 271.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 268.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 267.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 262.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 262.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 260.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 258.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 257.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 256.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 256.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 253.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 252.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 251.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 251.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 247.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 247.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 246.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 245.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 243.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 239.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 239.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 239.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 237.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 233.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 233.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 231.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 229.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 228.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 226.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 226.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 224.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 224.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 223.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 223.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 222.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 221.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 221.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 220.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 218.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 217.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 217.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 216.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 215.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 214.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 214.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 212.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 211.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 209.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 209.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 209.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 207.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 207.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 205.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 204.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 202.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 200.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 200.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 200.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 199.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 198.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 198.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 198.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 198.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 197.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 197.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 197.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 197.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 195.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 193.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 191.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 188.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 187.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 186.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 185.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 184.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 181.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 181.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 180.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 179.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 178.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 177.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 177.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 177.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 176.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 175.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 173.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 172.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 168.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 163.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 161.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 159.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 159.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 157.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 156.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 156.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 154.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 153.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 151.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 150.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 149.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 143.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 141.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 141.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 140.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 139.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 138.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 136.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 136.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 135.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 134.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 132.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 131.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 131.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 131.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 127.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 126.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 126.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 125.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 124.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 123.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 123.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 122.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 122.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 122.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 121.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 119.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 119.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 118.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 116.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 116.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 114.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 113.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 112.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 110.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 110.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 110.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 110.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 109.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 109.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 103.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 102.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 102.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 102.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 100.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 100.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 98.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 96.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 96.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 95.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 95.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 94.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 94.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 93.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 90.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 89.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 87.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 87.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 86.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 83.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 83.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 82.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 82.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 81.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 79.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 76.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 73.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 71.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 71.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 71.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 68.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 65.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 64.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 63.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 63.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 63.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 63.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 62.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 61.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 54.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 52.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 51.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 50.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 49.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 49.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 47.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 46.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 45.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 45.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 44.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 42.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 41.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 36.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 35.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 35.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 34.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 32.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 32.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 31.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 30.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 26.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 26.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 24.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 24.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 23.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 21.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 20.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 20.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 19.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 17.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 17.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 15.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 15.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 11.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 11.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 11.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 9.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 7.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 7.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 7.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 7.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 5.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 4.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 4.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 4.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1.7
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Brain - Putamen (basal ganglia)
Average nTPM: 188.8
Samples: 205

Max nTPM: 689.7
Min nTPM: 1.3
Std nTPM: 134.8
Median nTPM: 175.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 689.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 645.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 570.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 533.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 506.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 474.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 472.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 467.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 465.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 447.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 445.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 421.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 408.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 398.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 397.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 395.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 387.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 385.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 379.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 373.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 372.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 371.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 367.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 367.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 341.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 339.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 337.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 329.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 329.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 327.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 325.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 316.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 315.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 313.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 312.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 306.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 305.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 303.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 302.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 299.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 294.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 293.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 291.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 288.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 285.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 283.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 282.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 281.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 279.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 274.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 274.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 273.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 272.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 270.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 269.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 265.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 263.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 261.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 256.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 250.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 248.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 247.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 247.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 247.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 241.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 240.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 240.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 240.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 236.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 234.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 233.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 233.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 230.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 227.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 225.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 225.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 224.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 223.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 223.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 214.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 213.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 213.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 211.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 210.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 202.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 201.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 198.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 197.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 196.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 195.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 195.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 192.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 192.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 189.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 188.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 186.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 183.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 180.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 179.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 178.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 178.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 176.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 175.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 168.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 167.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 164.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 164.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 158.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 156.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 151.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 151.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 150.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 149.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 148.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 146.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 144.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 144.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 143.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 143.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 143.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 142.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 140.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 139.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 136.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 135.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 135.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 135.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 131.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 127.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 126.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 124.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 122.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 122.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 122.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 122.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 117.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 115.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 112.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 110.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 110.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 109.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 106.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 103.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 102.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 102.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 101.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 96.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 90.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 88.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 88.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 83.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 82.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 80.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 80.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 79.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 77.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 76.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 74.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 72.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 71.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 70.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 68.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 67.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 60.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 58.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 53.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 52.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 51.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 50.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 47.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 46.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 46.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 43.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 41.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 40.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 37.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 33.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 26.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 26.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 26.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 26.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 26.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 24.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 24.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 24.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 24.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 23.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 22.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 21.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 17.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 16.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 14.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 14.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 13.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 13.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 13.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 12.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 9.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 8.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 7.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 5.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 4.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 2.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

179.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 78.3
FF:10164-103B2 76 years, female 78.3
Nucleus accumbens
Scaled Tags Per Million: 113.7
FF:10037-101F1 23-56 years, mixed 113.7
Putamen
Scaled Tags Per Million: 179.6
FF:10176-103C5 60 years, female 179.6
Globus pallidus
Scaled Tags Per Million: 77.1
FF:10175-103C4 60 years, female 143.6
FF:10161-103A8 76 years, female 10.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

511.9
Pig sample Sample description nTPM
Caudate
nTPM: 349.3
Samples: 4

Max nTPM: 426.6
Min nTPM: 274.3
Sample A Female 274.3
Sample B Female 308.2
Sample C Male 426.6
Sample D Male 388.1
Putamen
nTPM: 511.9
Samples: 4

Max nTPM: 902.8
Min nTPM: 142.8
Sample A Female 142.8
Sample B Female 513.0
Sample C Male 902.8
Sample D Male 489.0
Septum
nTPM: 123.7
Samples: 4

Max nTPM: 263.0
Min nTPM: 3.8
Sample A Female 263.0
Sample B Female 210.1
Sample C Male 18.0
Sample D Male 3.8
Ventral pallidum
nTPM: 242.0
Samples: 4

Max nTPM: 356.4
Min nTPM: 36.1
Sample A Female 356.4
Sample B Female 306.1
Sample C Male 36.1
Sample D Male 269.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

560.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 489.9
Samples: 4

Max nTPM: 516.4
Min nTPM: 451.1
Sample A Male 500.6
Sample B Male 516.4
Sample C Female 491.4
Sample D Female 451.1
Septum
nTPM: 75.6
Samples: 4

Max nTPM: 124.5
Min nTPM: 35.3
Sample A Male 124.5
Sample B Male 35.3
Sample C Female 85.3
Sample D Female 57.4
Ventral forebrain
nTPM: 560.0
Samples: 4

Max nTPM: 674.5
Min nTPM: 507.5
Sample A Male 520.4
Sample B Male 507.5
Sample C Female 674.5
Sample D Female 537.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 9.2
1038 Antisense, RP_Baylor_103056, Mouse strain C57BL/6J (56 days, male) 9.2
1039 Antisense, RP_Baylor_103056, Mouse strain C57BL/6J (56 days, male) 5.7
Pallidum
Expression energy: 5.6
1039 Antisense, RP_Baylor_103056, Mouse strain C57BL/6J (56 days, male) 5.6
1038 Antisense, RP_Baylor_103056, Mouse strain C57BL/6J (56 days, male) 2.9

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