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TNFRSF12A
HPA
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  • TNFRSF12A
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

TNFRSF12A
Synonyms CD266, FN14, TweakR
Gene descriptioni

Full gene name according to HGNC.

TNF receptor superfamily member 12A
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
CD markers
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 16
Cytoband p13.3
Chromosome location (bp) 3018445 - 3022383
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000006327 (version 109)
Entrez gene 51330
HGNC HGNC:18152
UniProt Q9NP84 (UniProt - Evidence at protein level)
neXtProt NX_Q9NP84
GeneCards TNFRSF12A
Antibodypedia TNFRSF12A antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Receptor for TNFSF12/TWEAK. Weak inducer of apoptosis in some cell types. Promotes angiogenesis and the proliferation of endothelial cells. May modulate cellular adhesion to matrix proteins.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Developmental protein, Receptor
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Angiogenesis, Apoptosis, Cell adhesion, Differentiation
Gene summary (Entrez)i

Useful information about the gene from Entrez

Involved in positive regulation of extrinsic apoptotic signaling pathway and regulation of wound healing. Predicted to be located in cell surface and ruffle. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
TNFRSF12A-201
ENSP00000326737
ENST00000326577
Q9NP84
[Direct mapping] Tumor necrosis factor receptor superfamily member 12A
Show all
CD markers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0001525 [angiogenesis]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006915 [apoptotic process]
GO:0007155 [cell adhesion]
GO:0016020 [membrane]
GO:0030154 [cell differentiation]
GO:0043065 [positive regulation of apoptotic process]
GO:0061041 [regulation of wound healing]
GO:2001238 [positive regulation of extrinsic apoptotic signaling pathway]
Show all
129 aa
13.9 kDa
Yes 1
TNFRSF12A-202
ENSP00000343894
ENST00000341627
Q9NP84
[Direct mapping] Tumor necrosis factor receptor superfamily member 12A
Show all
CD markers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0001525 [angiogenesis]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006915 [apoptotic process]
GO:0007155 [cell adhesion]
GO:0016020 [membrane]
GO:0030154 [cell differentiation]
GO:0043065 [positive regulation of apoptotic process]
GO:0061041 [regulation of wound healing]
GO:2001238 [positive regulation of extrinsic apoptotic signaling pathway]
Show all
94 aa
10.2 kDa
Yes 1
TNFRSF12A-204
ENSP00000458898
ENST00000573001
I3L1J9
[Direct mapping] Tumor necrosis factor receptor superfamily member 12A
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0016020 [membrane]
GO:0043065 [positive regulation of apoptotic process]
Show all
80 aa
8.7 kDa
No 1
TNFRSF12A-206
ENSP00000460610
ENST00000575124
I3L3P4
[Direct mapping] Tumor necrosis factor receptor superfamily member 12A
Show all
   MEMSAT3 predicted membrane proteins
   THUMBUP predicted membrane proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0043065 [positive regulation of apoptotic process]
Show all
226 aa
24.1 kDa
Yes 0
TNFRSF12A-207
ENSP00000461756
ENST00000575836
I3L539
[Direct mapping] Tumor necrosis factor receptor superfamily member 12A
Show all
   MEMSAT3 predicted membrane proteins
   THUMBUP predicted membrane proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0043065 [positive regulation of apoptotic process]
Show all
47 aa
5.2 kDa
Yes 0

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