HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:108.2 nTPM
HPA Brain:69.6 nTPM
GTEx:108.2 nTPM
FANTOM5:183.8 Scaled Tags Per Million
Pig:117.1 nTPM
Mouse:143.3 nTPM
Allen mouse:9.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029635Antibody HPA029637Antibody CAB033911
Glial cells Not detectedLowNot detected
Neuronal cells MediumMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 69.6
Sample id Sample description nTPM
Hippocampus
nTPM: 62.7
1898 Male, age 80, left hemisphere 80.5
2529 Female, age 94, left hemisphere 70.0
2621 Female, age 67, right hemisphere 62.8
1911 Female, age 85, right hemisphere 57.1
2148 Female, age 91, left hemisphere 54.1
1855 Male, age 76, left hemisphere 51.9
Dentate gyrus
nTPM: 61.1
1927 Female, age 91, both hemispheres 68.5
2010 Male, age 76, both hemispheres 66.7
2528 Male, age 74, both hemispheres 61.6
2246 Female, age 85, both hemispheres 58.9
2530 Female, age 94, left hemisphere 55.6
2531 Female, age 67, both hemispheres 55.1
Entorhinal gyrus
nTPM: 61.9
2764 Male, age 80, right hemisphere 72.5
2117 Female, age 91, right hemisphere 68.2
1938 Female, age 85, left hemisphere 67.3
1787 Male, age 76, left hemisphere 59.5
2686 Male, age 75, right hemisphere 52.8
2613 Female, age 94, left hemisphere 51.2
Hippocampus, CA1
nTPM: 65.1
2749 Male, age 80, left hemisphere 80.1
1873 Female, age 85, both hemispheres 62.9
2045 Male, age 76, both hemispheres 62.3
2082 Female, age 91, right hemisphere 60.5
2527 Male, age 74, both hemispheres 59.7
Hippocampus, CA2
nTPM: 65.2
1963 Male, age 80, left hemisphere 74.7
2249 Male, age 74, both hemispheres 70.8
1892 Male, age 76, both hemispheres 66.0
2437 Female, age 94, left hemisphere 64.6
1940 Female, age 85, left hemisphere 58.7
2113 Female, age 91, right hemisphere 56.2
Hippocampus, CA3
nTPM: 62.4
2436 Male, age 74, both hemispheres 69.1
1891 Female, age 85, both hemispheres 68.7
2137 Male, age 80, left hemisphere 67.1
1867 Male, age 76, both hemispheres 64.6
2620 Female, age 94, left hemisphere 54.3
2861 Female, age 67, both hemispheres 50.7
Parahippocampal cortex
nTPM: 58.9
1850 Male, age 80, both hemispheres 74.1
1990 Female, age 91, right hemisphere 68.4
2250 Female, age 67, right hemisphere 66.2
1933 Female, age 85, both hemispheres 63.5
2018 Male, age 76, both hemispheres 61.2
2532 Female, age 72, left hemisphere 58.1
2245 Female, age 91, both hemispheres 54.1
2693 Female, age 94, both hemispheres 53.5
2622 Female, age 67, right hemisphere 45.2
2692 Male, age 74, both hemispheres 44.8
Perirhinal gyrus
nTPM: 69.6
1841 Female, age 85, right hemisphere 78.3
1847 Female, age 91, left hemisphere 77.9
1794 Male, age 80, right hemisphere 77.0
2848 Male, age 76, right hemisphere 58.2
2521 Female, age 94, right hemisphere 56.8
Subiculum
nTPM: 61.6
1977 Female, age 85, both hemispheres 70.7
1901 Male, age 80, both hemispheres 64.0
2438 Female, age 94, left hemisphere 61.8
2042 Male, age 76, both hemispheres 59.5
2619 Male, age 74, both hemispheres 57.4
2729 Female, age 91, right hemisphere 56.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 108.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 108.2
Samples: 197

Max nTPM: 218.8
Min nTPM: 68.6
Std nTPM: 20.1
Median nTPM: 105.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 218.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 210.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 176.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 157.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 155.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 148.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 146.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 145.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 140.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 139.8
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 139.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 183.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 183.8
FF:10169-103B7 60 years, female 240.9
FF:10153-102I9 76 years, female 126.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 117.1
Pig sample Sample description nTPM
Subiculum
nTPM: 98.1
Samples: 4

Max nTPM: 125.1
Min nTPM: 83.8
Sample A Female 125.1
Sample B Female 94.9
Sample C Male 88.4
Sample D Male 83.8
Dorsal hippocampus
nTPM: 117.2
Samples: 4

Max nTPM: 154.7
Min nTPM: 90.8
Sample A Female 154.7
Sample B Female 121.7
Sample C Male 101.4
Sample D Male 90.8
Entorhinal cortex
nTPM: 87.3
Samples: 4

Max nTPM: 105.7
Min nTPM: 68.4
Sample A Female 95.2
Sample B Female 105.7
Sample C Male 79.9
Sample D Male 68.4
Ventral hippocampus
nTPM: 108.4
Samples: 4

Max nTPM: 119.9
Min nTPM: 83.3
Sample A Female 119.9
Sample B Female 83.3
Sample C Male 117.6
Sample D Male 112.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 143.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 134.4
Samples: 4

Max nTPM: 141.0
Min nTPM: 127.3
Sample A Male 127.3
Sample B Male 138.8
Sample C Female 141.0
Sample D Female 130.5
Hippocampal formation
nTPM: 143.3
Samples: 4

Max nTPM: 166.3
Min nTPM: 133.0
Sample A Male 166.3
Sample B Male 133.0
Sample C Female 135.5
Sample D Female 138.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.9
74059243 Antisense, RP_051121_03_C07, Mouse strain C57BL/6J (56 days, male) 9.9

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