HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:81.5 nTPM
HPA Brain:105.1 nTPM
GTEx:81.5 nTPM
FANTOM5:168.9 Scaled Tags Per Million
Pig:87.4 nTPM
Mouse:95.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014059Antibody HPA061450
Glial cells HighNot detected
Neuronal cells MediumLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 105.1
Sample id Sample description nTPM
Hippocampus
nTPM: 105.1
2529 Female, age 94, left hemisphere 120.6
1898 Male, age 80, left hemisphere 118.2
2621 Female, age 67, right hemisphere 102.8
2148 Female, age 91, left hemisphere 99.0
1855 Male, age 76, left hemisphere 95.6
1911 Female, age 85, right hemisphere 94.3
Dentate gyrus
nTPM: 95.7
2530 Female, age 94, left hemisphere 123.6
2010 Male, age 76, both hemispheres 105.8
2246 Female, age 85, both hemispheres 101.6
2528 Male, age 74, both hemispheres 86.4
1927 Female, age 91, both hemispheres 81.2
2531 Female, age 67, both hemispheres 75.3
Entorhinal gyrus
nTPM: 91.5
2686 Male, age 75, right hemisphere 103.3
2117 Female, age 91, right hemisphere 102.6
1938 Female, age 85, left hemisphere 97.3
1787 Male, age 76, left hemisphere 91.1
2764 Male, age 80, right hemisphere 85.8
2613 Female, age 94, left hemisphere 68.9
Hippocampus, CA1
nTPM: 98.6
2749 Male, age 80, left hemisphere 116.6
2527 Male, age 74, both hemispheres 110.9
1873 Female, age 85, both hemispheres 108.8
2045 Male, age 76, both hemispheres 85.1
2082 Female, age 91, right hemisphere 71.6
Hippocampus, CA2
nTPM: 97.4
1892 Male, age 76, both hemispheres 112.9
2249 Male, age 74, both hemispheres 102.4
1963 Male, age 80, left hemisphere 97.7
2437 Female, age 94, left hemisphere 96.3
1940 Female, age 85, left hemisphere 91.1
2113 Female, age 91, right hemisphere 84.2
Hippocampus, CA3
nTPM: 85.4
1867 Male, age 76, both hemispheres 96.4
1891 Female, age 85, both hemispheres 95.7
2137 Male, age 80, left hemisphere 90.4
2436 Male, age 74, both hemispheres 86.0
2620 Female, age 94, left hemisphere 72.7
2861 Female, age 67, both hemispheres 71.0
Parahippocampal cortex
nTPM: 91.0
2245 Female, age 91, both hemispheres 107.5
1850 Male, age 80, both hemispheres 106.9
2532 Female, age 72, left hemisphere 95.5
2692 Male, age 74, both hemispheres 95.2
2018 Male, age 76, both hemispheres 94.6
2250 Female, age 67, right hemisphere 89.6
1933 Female, age 85, both hemispheres 88.8
1990 Female, age 91, right hemisphere 80.7
2622 Female, age 67, right hemisphere 78.9
2693 Female, age 94, both hemispheres 72.2
Perirhinal gyrus
nTPM: 92.0
1841 Female, age 85, right hemisphere 98.1
1794 Male, age 80, right hemisphere 97.7
2848 Male, age 76, right hemisphere 92.0
1847 Female, age 91, left hemisphere 87.5
2521 Female, age 94, right hemisphere 84.9
Subiculum
nTPM: 100.3
2438 Female, age 94, left hemisphere 127.4
1901 Male, age 80, both hemispheres 109.7
2042 Male, age 76, both hemispheres 100.5
1977 Female, age 85, both hemispheres 91.5
2619 Male, age 74, both hemispheres 90.2
2729 Female, age 91, right hemisphere 82.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 81.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 81.5
Samples: 197

Max nTPM: 174.2
Min nTPM: 36.7
Std nTPM: 22.0
Median nTPM: 80.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 174.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 167.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 157.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 153.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 150.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 143.2
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 140.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 131.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 131.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 123.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 114.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 168.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 168.9
FF:10169-103B7 60 years, female 182.7
FF:10153-102I9 76 years, female 155.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 87.4
Pig sample Sample description nTPM
Subiculum
nTPM: 75.3
Samples: 4

Max nTPM: 92.2
Min nTPM: 63.8
Sample A Female 92.2
Sample B Female 63.8
Sample C Male 67.3
Sample D Male 77.8
Dorsal hippocampus
nTPM: 87.4
Samples: 4

Max nTPM: 106.7
Min nTPM: 65.7
Sample A Female 103.0
Sample B Female 74.2
Sample C Male 106.7
Sample D Male 65.7
Entorhinal cortex
nTPM: 78.6
Samples: 4

Max nTPM: 89.8
Min nTPM: 74.8
Sample A Female 89.8
Sample B Female 74.8
Sample C Male 74.9
Sample D Male 74.8
Ventral hippocampus
nTPM: 74.0
Samples: 4

Max nTPM: 99.2
Min nTPM: 56.5
Sample A Female 99.2
Sample B Female 62.9
Sample C Male 56.5
Sample D Male 77.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 95.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.6
Samples: 4

Max nTPM: 99.8
Min nTPM: 92.3
Sample A Male 95.0
Sample B Male 95.1
Sample C Female 92.3
Sample D Female 99.8
Hippocampal formation
nTPM: 94.3
Samples: 4

Max nTPM: 99.7
Min nTPM: 90.5
Sample A Male 90.5
Sample B Male 94.1
Sample C Female 99.7
Sample D Female 93.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org