We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TYROBP
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • TYROBP
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:32.2 nTPM
HPA Brain:29.1 nTPM
GTEx:32.2 nTPM
FANTOM5:214.9 Scaled Tags Per Million
Pig:88.3 nTPM
Mouse:103.8 nTPM
Allen mouse:0.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041899Antibody CAB009493
Glial cells LowLow
Neuronal cells Not detectedLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 22.9
2846 Female, age 79, unknown 35.5
2481 Female, age 94, left hemisphere 24.6
2289 Male, age 61, right hemisphere 24.0
1857 Female, age 85, left hemisphere 23.7
1781 Male, age 74, unknown 23.5
1854 Male, age 80, left hemisphere 19.3
2290 Female, age 72, unknown 17.5
2288 Male, age 75, left hemisphere 15.1
Globus pallidus, externus
nTPM: 29.1
2395 Male, age 75, both hemispheres 50.8
2772 Female, age 79, unknown 38.1
1996 Male, age 80, right hemisphere 31.2
2567 Female, age 72, unknown 14.7
2646 Male, age 61, right hemisphere 10.4
Globus pallidus, internus
nTPM: 25.8
1818 Male, age 74, unknown 34.1
2037 Male, age 80, right hemisphere 31.8
2778 Female, age 91, both hemispheres 29.6
2566 Female, age 72, unknown 28.7
2111 Female, age 85, right hemisphere 24.3
2483 Female, age 94, right hemisphere 20.8
2287 Male, age 75, right hemisphere 11.1
Nucleus accumbens
nTPM: 20.3
2732 Male, age 80, right hemisphere 29.9
2698 Female, age 72, unknown 29.7
1783 Male, age 74, unknown 22.0
2391 Female, age 94, left hemisphere 20.6
1806 Female, age 85, left hemisphere 19.8
1856 Female, age 91, right hemisphere 19.7
2286 Male, age 75, left hemisphere 14.6
2824 Male, age 61, right hemisphere 6.2
Nucleus basalis of Meynert
nTPM: 22.2
2821 Male, age 75, both hemispheres 33.3
2484 Female, age 94, left hemisphere 23.3
2393 Male, age 80, right hemisphere 23.1
2569 Male, age 61, both hemispheres 9.1
Nucleus of the diagonal band
nTPM: 16.9
1812 Female, age 91, both hemispheres 27.0
1979 Male, age 74, unknown 19.6
2775 Male, age 80, right hemisphere 18.3
2195 Female, age 85, both hemispheres 11.6
2029 Male, age 61, right hemisphere 8.0
Putamen
nTPM: 19.6
2482 Female, age 94, left hemisphere 41.7
2489 Female, age 72, unknown 22.0
2466 Female, age 79, unknown 21.0
1937 Female, age 91, right hemisphere 18.5
1829 Male, age 74, unknown 13.4
1838 Male, age 80, right hemisphere 13.3
2647 Male, age 75, left hemisphere 7.6
Septal nuclei
nTPM: 24.6
2199 Male, age 80, right hemisphere 36.8
2009 Female, age 91, both hemispheres 27.6
2629 Female, age 94, right hemisphere 26.9
2394 Male, age 61, left hemisphere 23.7
2059 Female, age 85, both hemispheres 22.4
2031 Female, age 72, unknown 17.7
1960 Male, age 74, unknown 17.4
Stria terminalis, bed nucleus
nTPM: 15.4
1974 Female, age 91, both hemispheres 16.2
2201 Male, age 74, unknown 15.9
2486 Female, age 94, both hemispheres 13.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 32.2
Samples: 246

Max nTPM: 169.3
Min nTPM: 4.5
Std nTPM: 22.2
Median nTPM: 25.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 169.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 112.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 112.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 111.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 98.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 97.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 90.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 90.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 87.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 80.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 79.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 75.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 75.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 74.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 72.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 71.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 70.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 69.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 67.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 67.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 65.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 63.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 63.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 62.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 61.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 60.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 60.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 59.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 58.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 55.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 55.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 53.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 53.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 53.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 53.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 52.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 51.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 50.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 50.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 50.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 49.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 49.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 48.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 48.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 47.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 46.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 45.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 44.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 43.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 43.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 42.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 41.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 41.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 41.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 41.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 40.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 40.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 39.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 38.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 37.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 37.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 37.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 37.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 37.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 37.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 37.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 36.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 36.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 36.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 35.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 35.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 35.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 35.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 34.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 34.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 34.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 34.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 34.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 34.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 34.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 33.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 33.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 33.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 33.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 32.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 32.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 32.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 32.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 31.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 31.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 31.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 30.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 30.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 30.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 30.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 30.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 29.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 29.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 29.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 29.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 29.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 29.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 29.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 29.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 29.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 29.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 28.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 28.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 28.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 27.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 27.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 27.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 27.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 27.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 27.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 27.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 27.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 26.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 26.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 26.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 26.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 26.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 25.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 25.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 25.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 25.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 25.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 25.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 25.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 25.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 25.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 25.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 24.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 24.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 24.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 24.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 24.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 24.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 23.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 23.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 23.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 23.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 23.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 23.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 23.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 23.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 23.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 23.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 23.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 23.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 22.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 22.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 22.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 22.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 22.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 22.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 22.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 22.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 22.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 22.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 21.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 21.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 21.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 21.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 21.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 21.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 21.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 21.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 20.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 20.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 20.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 20.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 20.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 20.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 19.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 19.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 19.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 19.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 19.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 19.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 19.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 19.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 19.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 19.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 18.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 17.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 17.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 17.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 16.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 16.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 16.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 16.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 16.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 16.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 16.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 15.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 15.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 15.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 15.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 15.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 15.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 15.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 15.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 15.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 15.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 14.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 14.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 14.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 14.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 14.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 14.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 14.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 14.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 14.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 13.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 13.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 13.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 13.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 12.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 12.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 12.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 12.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 12.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 11.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 11.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 11.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 11.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 11.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 11.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 10.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 10.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 10.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 10.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 10.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 8.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 8.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 7.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 7.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 7.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 7.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 6.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 6.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 6.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 5.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 5.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 4.5
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 27.8
Samples: 246

Max nTPM: 109.3
Min nTPM: 3.4
Std nTPM: 20.0
Median nTPM: 21.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 109.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 99.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 92.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 90.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 89.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 88.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 88.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 87.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 84.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 79.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 77.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 69.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 68.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 68.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 67.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 66.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 64.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 64.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 63.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 62.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 57.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 57.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 56.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 56.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 56.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 55.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 55.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 55.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 54.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 53.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 50.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 49.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 49.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 48.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 48.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 47.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 46.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 46.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 45.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 45.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 45.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 45.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 45.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 44.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 43.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 43.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 40.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 40.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 40.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 39.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 39.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 39.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 38.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 38.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 36.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 36.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 36.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 35.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 34.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 34.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 34.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 34.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 33.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 31.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 31.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 31.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 31.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 31.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 30.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 30.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 30.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 29.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 29.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 29.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 29.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 29.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 29.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 29.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 29.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 29.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 29.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 28.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 28.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 28.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 28.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 28.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 28.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 28.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 28.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 28.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 27.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 27.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 27.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 26.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 26.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 26.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 26.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 26.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 26.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 24.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 24.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 24.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 24.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 24.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 24.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 24.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 24.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 24.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 23.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 23.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 23.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 23.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 23.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 23.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 23.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 23.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 22.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 22.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 21.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 21.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 21.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 21.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 21.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 21.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 21.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 20.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 20.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 20.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 20.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 20.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 20.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 20.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 20.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 20.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 20.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 19.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 19.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 19.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 19.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 19.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 19.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 19.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 19.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 19.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 19.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 19.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 18.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 18.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 18.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 18.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 18.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 18.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 18.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 18.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 18.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 18.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 17.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 17.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 17.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 17.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 17.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 17.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 17.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 17.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 17.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 16.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 16.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 16.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 16.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 16.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 16.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 16.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 15.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 15.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 15.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 15.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 15.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 15.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 15.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 15.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 14.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 14.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 14.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 14.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 14.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 13.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 13.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 13.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 13.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 13.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 13.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 13.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 12.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 12.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 12.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 12.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 12.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 12.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 12.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 12.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 12.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 11.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 11.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 11.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 11.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 11.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 11.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 10.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 10.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 10.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 10.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 10.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 10.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 10.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 10.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 10.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 10.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 10.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 10.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 10.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 9.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 9.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 9.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 9.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 8.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 8.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 8.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 8.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 8.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 7.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 7.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 7.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 7.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 7.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 7.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 7.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 6.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 6.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 6.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 5.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 5.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 4.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 4.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 4.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 3.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 3.4
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 29.7
Samples: 205

Max nTPM: 118.8
Min nTPM: 4.2
Std nTPM: 19.2
Median nTPM: 24.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 118.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 88.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 87.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 86.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 85.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 85.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 79.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 77.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 77.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 72.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 70.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 69.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 67.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 63.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 62.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 61.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 60.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 60.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 60.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 58.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 56.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 54.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 53.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 53.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 53.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 51.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 50.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 50.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 49.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 49.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 48.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 47.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 47.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 46.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 46.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 46.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 45.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 45.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 44.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 44.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 43.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 42.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 41.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 40.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 39.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 39.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 38.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 38.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 37.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 36.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 36.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 35.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 34.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 34.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 33.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 33.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 33.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 33.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 33.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 32.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 32.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 32.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 32.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 31.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 31.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 31.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 31.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 31.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 31.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 31.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 30.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 30.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 30.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 30.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 29.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 29.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 29.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 29.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 29.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 29.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 28.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 28.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 28.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 27.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 27.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 27.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 27.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 27.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 27.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 26.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 26.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 26.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 25.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 25.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 25.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 25.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 25.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 25.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 25.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 25.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 24.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 24.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 24.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 24.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 24.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 24.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 23.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 23.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 23.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 23.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 23.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 23.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 23.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 22.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 22.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 22.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 22.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 22.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 22.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 22.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 22.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 22.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 22.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 21.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 21.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 21.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 21.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 21.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 20.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 20.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 20.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 19.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 19.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 19.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 19.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 19.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 19.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 18.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 18.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 18.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 18.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 18.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 18.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 18.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 18.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 18.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 18.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 17.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 17.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 17.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 17.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 17.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 17.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 17.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 17.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 16.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 16.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 16.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 16.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 16.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 16.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 16.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 15.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 15.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 15.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 15.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 14.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 14.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 14.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 14.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 13.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 13.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 13.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 13.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 13.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 13.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 13.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 13.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 13.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 12.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 12.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 11.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 11.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 10.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 10.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 10.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 10.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 10.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 10.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 10.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 10.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 9.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 8.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 8.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 7.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 7.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 7.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 7.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 7.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 6.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 6.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 5.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 4.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 4.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 4.2
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

214.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 122.6
FF:10164-103B2 76 years, female 122.6
Nucleus accumbens
Scaled Tags Per Million: 88.2
FF:10037-101F1 23-56 years, mixed 88.2
Putamen
Scaled Tags Per Million: 80.2
FF:10176-103C5 60 years, female 80.2
Globus pallidus
Scaled Tags Per Million: 214.9
FF:10161-103A8 76 years, female 254.8
FF:10175-103C4 60 years, female 175.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.3
Pig sample Sample description nTPM
Caudate
nTPM: 42.1
Samples: 4

Max nTPM: 54.6
Min nTPM: 32.8
Sample A Female 54.6
Sample B Female 45.0
Sample C Male 36.1
Sample D Male 32.8
Putamen
nTPM: 55.2
Samples: 4

Max nTPM: 85.8
Min nTPM: 36.2
Sample A Female 85.8
Sample B Female 46.7
Sample C Male 36.2
Sample D Male 52.1
Septum
nTPM: 88.3
Samples: 4

Max nTPM: 108.0
Min nTPM: 67.3
Sample A Female 108.0
Sample B Female 67.3
Sample C Male 105.2
Sample D Male 72.8
Ventral pallidum
nTPM: 52.4
Samples: 4

Max nTPM: 55.2
Min nTPM: 50.4
Sample A Female 52.3
Sample B Female 55.2
Sample C Male 50.4
Sample D Male 51.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 103.8
Samples: 4

Max nTPM: 114.4
Min nTPM: 93.8
Sample A Male 98.4
Sample B Male 114.4
Sample C Female 93.8
Sample D Female 108.7
Septum
nTPM: 67.6
Samples: 4

Max nTPM: 73.8
Min nTPM: 61.4
Sample A Male 61.4
Sample B Male 73.8
Sample C Female 68.1
Sample D Female 67.1
Ventral forebrain
nTPM: 87.7
Samples: 4

Max nTPM: 102.6
Min nTPM: 75.2
Sample A Male 87.6
Sample B Male 75.2
Sample C Female 102.6
Sample D Female 85.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.5
70523695 Antisense, RP_050301_01_H02, Mouse strain C57BL/6J (56 days, male) 0.5
Pallidum
Expression energy: 0.2
70523695 Antisense, RP_050301_01_H02, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org