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ELOVL5
HPA
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  • ELOVL5
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ELOVL5
Synonyms dJ483K16.1, HELO1, SCA38
Gene descriptioni

Full gene name according to HGNC.

ELOVL fatty acid elongase 5
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Human disease related genes
Metabolic proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 6
Cytoband p12.1
Chromosome location (bp) 53267398 - 53349179
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000012660 (version 109)
Entrez gene 60481
HGNC HGNC:21308
UniProt Q9NYP7 (UniProt - Evidence at protein level)
neXtProt NX_Q9NYP7
GeneCards ELOVL5
Antibodypedia ELOVL5 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme that acts specifically toward polyunsaturated acyl-CoA with the higher activity toward C18:3(n-6) acyl-CoA. May participate in the production of monounsaturated and of polyunsaturated VLCFAs of different chain lengths that are involved in multiple biological processes as precursors of membrane lipids and lipid mediators (By similarity) 1, 2. In conditions where the essential linoleic and alpha linoleic fatty acids are lacking it is also involved in the synthesis of Mead acid from oleic acid (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Transferase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Fatty acid biosynthesis, Fatty acid metabolism, Lipid biosynthesis, Lipid metabolism
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene belongs to the ELO family. It is highly expressed in the adrenal gland and testis, and encodes a multi-pass membrane protein that is localized in the endoplasmic reticulum. This protein is involved in the elongation of long-chain polyunsaturated fatty acids. Mutations in this gene have been associated with spinocerebellar ataxia-38 (SCA38). Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Sep 2014]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ELOVL5-201
ENSP00000306640
ENST00000304434
Q9NYP7
[Direct mapping] Elongation of very long chain fatty acids protein 5
Show all
A0A024RD35
[Target identity:100%; Query identity:100%] Elongation of very long chain fatty acids protein 5
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0006629 [lipid metabolic process]
GO:0006631 [fatty acid metabolic process]
GO:0006633 [fatty acid biosynthetic process]
GO:0006636 [unsaturated fatty acid biosynthetic process]
GO:0009922 [fatty acid elongase activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016740 [transferase activity]
GO:0019367 [fatty acid elongation, saturated fatty acid]
GO:0030148 [sphingolipid biosynthetic process]
GO:0030425 [dendrite]
GO:0030497 [fatty acid elongation]
GO:0034625 [fatty acid elongation, monounsaturated fatty acid]
GO:0034626 [fatty acid elongation, polyunsaturated fatty acid]
GO:0035338 [long-chain fatty-acyl-CoA biosynthetic process]
GO:0036109 [alpha-linolenic acid metabolic process]
GO:0042761 [very long-chain fatty acid biosynthetic process]
GO:0042995 [cell projection]
GO:0043025 [neuronal cell body]
GO:0043651 [linoleic acid metabolic process]
GO:0045723 [positive regulation of fatty acid biosynthetic process]
GO:0097447 [dendritic tree]
GO:0102756 [very-long-chain 3-ketoacyl-CoA synthase activity]
Show all
299 aa
35.3 kDa
No 7
ELOVL5-202
ENSP00000359951
ENST00000370913
Q9NYP7
[Direct mapping] Elongation of very long chain fatty acids protein 5
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0006629 [lipid metabolic process]
GO:0006631 [fatty acid metabolic process]
GO:0006633 [fatty acid biosynthetic process]
GO:0006636 [unsaturated fatty acid biosynthetic process]
GO:0009922 [fatty acid elongase activity]
GO:0016020 [membrane]
GO:0016740 [transferase activity]
GO:0019367 [fatty acid elongation, saturated fatty acid]
GO:0030148 [sphingolipid biosynthetic process]
GO:0030425 [dendrite]
GO:0030497 [fatty acid elongation]
GO:0034625 [fatty acid elongation, monounsaturated fatty acid]
GO:0034626 [fatty acid elongation, polyunsaturated fatty acid]
GO:0035338 [long-chain fatty-acyl-CoA biosynthetic process]
GO:0036109 [alpha-linolenic acid metabolic process]
GO:0042761 [very long-chain fatty acid biosynthetic process]
GO:0042995 [cell projection]
GO:0043025 [neuronal cell body]
GO:0043651 [linoleic acid metabolic process]
GO:0045723 [positive regulation of fatty acid biosynthetic process]
GO:0097447 [dendritic tree]
GO:0102756 [very-long-chain 3-ketoacyl-CoA synthase activity]
Show all
88 aa
9.6 kDa
No 0
ELOVL5-203
ENSP00000359956
ENST00000370918
Q9NYP7
[Direct mapping] Elongation of very long chain fatty acids protein 5
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0006629 [lipid metabolic process]
GO:0006631 [fatty acid metabolic process]
GO:0006633 [fatty acid biosynthetic process]
GO:0006636 [unsaturated fatty acid biosynthetic process]
GO:0009922 [fatty acid elongase activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016740 [transferase activity]
GO:0019367 [fatty acid elongation, saturated fatty acid]
GO:0030148 [sphingolipid biosynthetic process]
GO:0030425 [dendrite]
GO:0030497 [fatty acid elongation]
GO:0034625 [fatty acid elongation, monounsaturated fatty acid]
GO:0034626 [fatty acid elongation, polyunsaturated fatty acid]
GO:0035338 [long-chain fatty-acyl-CoA biosynthetic process]
GO:0036109 [alpha-linolenic acid metabolic process]
GO:0042761 [very long-chain fatty acid biosynthetic process]
GO:0042995 [cell projection]
GO:0043025 [neuronal cell body]
GO:0043651 [linoleic acid metabolic process]
GO:0045723 [positive regulation of fatty acid biosynthetic process]
GO:0097447 [dendritic tree]
GO:0102756 [very-long-chain 3-ketoacyl-CoA synthase activity]
Show all
326 aa
38.4 kDa
No 7
ELOVL5-207
ENSP00000440728
ENST00000542638
A0A0A0MTI6
[Direct mapping] Elongation of very long chain fatty acids protein
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0006629 [lipid metabolic process]
GO:0006631 [fatty acid metabolic process]
GO:0006633 [fatty acid biosynthetic process]
GO:0009922 [fatty acid elongase activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016740 [transferase activity]
GO:0019367 [fatty acid elongation, saturated fatty acid]
GO:0030497 [fatty acid elongation]
GO:0042761 [very long-chain fatty acid biosynthetic process]
GO:0102756 [very-long-chain 3-ketoacyl-CoA synthase activity]
Show all
262 aa
30.7 kDa
No 4

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