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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:85.9 nTPM
HPA Brain:77.6 nTPM
GTEx:85.9 nTPM
FANTOM5:92.4 Scaled Tags Per Million
Pig:87.8 nTPM
Mouse:63.5 nTPM
Allen mouse:16.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038313Antibody HPA038314
Glial cells MediumNot detected
Neuronal cells HighNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 75.4
2290 Female, age 72, unknown 83.3
2846 Female, age 79, unknown 82.0
2289 Male, age 61, right hemisphere 78.4
1854 Male, age 80, left hemisphere 77.7
1857 Female, age 85, left hemisphere 77.6
2288 Male, age 75, left hemisphere 72.4
1781 Male, age 74, unknown 72.3
2481 Female, age 94, left hemisphere 59.8
Globus pallidus, externus
nTPM: 60.0
2646 Male, age 61, right hemisphere 67.3
2567 Female, age 72, unknown 60.0
2395 Male, age 75, both hemispheres 58.1
1996 Male, age 80, right hemisphere 58.0
2772 Female, age 79, unknown 56.4
Globus pallidus, internus
nTPM: 64.4
1818 Male, age 74, unknown 69.4
2111 Female, age 85, right hemisphere 66.8
2778 Female, age 91, both hemispheres 66.2
2566 Female, age 72, unknown 65.9
2483 Female, age 94, right hemisphere 62.1
2287 Male, age 75, right hemisphere 60.8
2037 Male, age 80, right hemisphere 59.9
Nucleus accumbens
nTPM: 77.6
2824 Male, age 61, right hemisphere 101.8
1783 Male, age 74, unknown 90.2
1856 Female, age 91, right hemisphere 87.3
2698 Female, age 72, unknown 77.4
1806 Female, age 85, left hemisphere 73.7
2391 Female, age 94, left hemisphere 69.3
2286 Male, age 75, left hemisphere 66.9
2732 Male, age 80, right hemisphere 54.0
Nucleus basalis of Meynert
nTPM: 66.7
2393 Male, age 80, right hemisphere 74.3
2569 Male, age 61, both hemispheres 66.9
2484 Female, age 94, left hemisphere 65.4
2821 Male, age 75, both hemispheres 60.4
Nucleus of the diagonal band
nTPM: 53.3
2029 Male, age 61, right hemisphere 63.1
1812 Female, age 91, both hemispheres 52.8
2775 Male, age 80, right hemisphere 52.3
2195 Female, age 85, both hemispheres 49.5
1979 Male, age 74, unknown 48.6
Putamen
nTPM: 75.0
1838 Male, age 80, right hemisphere 97.0
1937 Female, age 91, right hemisphere 85.6
1829 Male, age 74, unknown 81.5
2466 Female, age 79, unknown 76.5
2489 Female, age 72, unknown 65.3
2482 Female, age 94, left hemisphere 61.7
2647 Male, age 75, left hemisphere 57.0
Septal nuclei
nTPM: 52.7
2394 Male, age 61, left hemisphere 58.3
2629 Female, age 94, right hemisphere 56.9
1960 Male, age 74, unknown 53.0
2031 Female, age 72, unknown 51.6
2009 Female, age 91, both hemispheres 50.8
2059 Female, age 85, both hemispheres 50.4
2199 Male, age 80, right hemisphere 47.6
Stria terminalis, bed nucleus
nTPM: 52.8
2486 Female, age 94, both hemispheres 58.0
1974 Female, age 91, both hemispheres 50.8
2201 Male, age 74, unknown 49.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 80.8
Samples: 246

Max nTPM: 128.9
Min nTPM: 45.0
Std nTPM: 15.5
Median nTPM: 79.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 128.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 123.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 122.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 122.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 121.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 117.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 116.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 113.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 112.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 112.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 111.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 110.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 110.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 108.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 108.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 106.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 106.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 103.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 103.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 102.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 102.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 102.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 102.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 102.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 101.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 100.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 100.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 100.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 100.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 99.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 98.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 98.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 98.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 98.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 97.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 97.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 97.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 97.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 96.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 96.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 96.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 96.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 96.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 95.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 95.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 95.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 95.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 95.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 94.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 94.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 94.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 93.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 93.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 93.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 93.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 93.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 92.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 92.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 92.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 92.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 91.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 91.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 91.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 91.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 91.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 90.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 89.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 89.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 89.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 88.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 88.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 88.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 88.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 87.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 87.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 87.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 87.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 87.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 87.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 87.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 87.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 87.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 86.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 86.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 86.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 85.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 85.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 85.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 84.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 84.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 84.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 84.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 84.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 83.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 83.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 83.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 83.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 83.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 82.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 82.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 82.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 82.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 82.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 82.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 81.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 81.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 81.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 81.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 81.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 81.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 81.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 81.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 81.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 80.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 80.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 79.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 79.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 79.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 79.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 79.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 79.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 79.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 79.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 78.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 78.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 78.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 78.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 77.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 77.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 77.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 77.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 77.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 77.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 77.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 76.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 76.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 76.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 76.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 76.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 76.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 76.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 75.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 75.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 75.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 75.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 75.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 75.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 75.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 74.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 74.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 74.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 73.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 73.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 73.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 73.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 73.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 73.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 73.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 73.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 73.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 72.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 72.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 72.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 72.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 72.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 72.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 71.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 71.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 71.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 71.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 71.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 71.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 71.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 70.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 70.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 70.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 70.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 70.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 70.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 70.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 70.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 69.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 68.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 68.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 68.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 68.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 68.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 68.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 68.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 68.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 68.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 67.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 67.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 67.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 67.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 67.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 67.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 66.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 66.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 66.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 66.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 66.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 65.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 65.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 65.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 65.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 65.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 65.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 64.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 64.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 64.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 64.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 64.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 64.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 64.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 64.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 64.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 63.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 63.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 63.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 63.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 63.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 62.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 62.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 61.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 61.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 61.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 61.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 60.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 60.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 60.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 59.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 58.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 58.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 58.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 58.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 56.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 56.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 56.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 56.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 56.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 55.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 53.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 52.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 51.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 45.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 85.9
Samples: 246

Max nTPM: 148.5
Min nTPM: 32.7
Std nTPM: 20.2
Median nTPM: 87.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 148.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 133.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 130.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 127.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 125.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 122.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 121.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 121.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 121.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 120.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 118.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 118.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 118.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 117.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 117.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 117.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 116.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 116.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 116.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 116.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 115.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 113.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 113.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 112.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 111.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 111.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 110.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 110.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 110.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 109.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 109.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 108.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 108.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 108.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 108.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 107.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 106.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 106.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 106.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 106.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 106.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 105.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 105.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 105.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 105.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 104.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 104.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 104.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 104.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 104.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 104.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 104.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 104.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 104.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 103.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 102.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 102.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 101.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 101.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 101.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 100.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 100.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 100.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 100.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 100.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 100.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 99.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 99.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 99.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 98.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 98.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 98.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 97.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 97.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 97.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 96.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 96.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 96.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 96.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 95.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 95.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 95.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 95.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 94.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 94.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 94.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 94.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 94.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 94.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 94.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 93.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 93.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 93.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 93.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 93.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 92.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 92.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 92.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 92.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 92.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 92.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 91.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 91.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 91.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 91.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 90.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 90.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 90.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 89.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 89.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 89.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 89.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 89.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 89.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 89.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 88.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 88.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 88.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 88.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 87.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 87.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 87.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 87.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 87.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 87.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 86.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 86.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 86.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 86.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 85.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 85.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 84.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 84.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 84.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 84.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 83.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 83.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 82.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 82.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 82.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 81.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 81.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 80.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 80.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 80.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 80.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 79.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 79.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 78.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 78.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 78.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 78.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 77.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 77.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 77.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 77.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 77.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 77.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 77.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 76.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 76.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 75.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 75.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 75.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 75.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 75.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 75.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 75.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 74.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 73.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 73.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 73.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 73.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 72.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 72.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 72.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 72.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 71.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 70.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 70.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 69.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 69.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 68.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 68.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 68.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 68.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 68.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 68.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 68.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 68.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 67.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 67.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 67.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 67.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 67.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 67.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 66.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 66.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 66.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 66.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 66.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 65.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 65.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 65.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 65.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 65.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 65.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 64.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 64.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 64.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 63.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 63.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 63.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 63.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 63.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 63.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 61.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 61.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 60.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 60.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 60.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 60.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 59.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 59.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 59.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 59.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 57.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 57.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 56.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 56.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 55.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 55.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 55.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 55.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 54.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 53.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 53.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 53.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 52.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 50.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 47.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 46.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 44.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 40.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 40.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 32.7
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Brain - Putamen (basal ganglia)
Average nTPM: 79.7
Samples: 205

Max nTPM: 137.3
Min nTPM: 40.1
Std nTPM: 16.7
Median nTPM: 78.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 137.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 120.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 117.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 115.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 114.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 112.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 111.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 111.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 109.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 108.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 108.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 108.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 108.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 108.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 107.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 107.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 106.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 106.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 104.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 104.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 103.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 103.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 102.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 101.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 101.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 101.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 100.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 100.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 99.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 99.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 98.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 97.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 97.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 97.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 97.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 96.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 96.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 95.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 95.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 95.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 95.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 95.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 94.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 94.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 93.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 93.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 92.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 92.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 92.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 92.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 90.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 90.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 90.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 90.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 89.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 89.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 89.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 88.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 88.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 88.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 87.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 87.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 87.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 86.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 86.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 86.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 86.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 86.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 86.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 85.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 85.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 84.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 84.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 83.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 83.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 82.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 82.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 82.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 82.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 82.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 82.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 82.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 81.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 81.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 81.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 81.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 81.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 80.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 80.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 80.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 80.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 80.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 80.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 80.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 79.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 79.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 79.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 79.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 79.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 78.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 78.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 78.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 78.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 78.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 77.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 77.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 77.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 77.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 77.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 76.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 76.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 76.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 76.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 76.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 75.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 75.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 75.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 74.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 74.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 74.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 74.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 74.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 73.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 73.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 73.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 72.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 72.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 71.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 71.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 71.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 71.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 70.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 70.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 70.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 70.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 70.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 70.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 69.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 69.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 69.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 69.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 69.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 69.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 68.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 68.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 68.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 68.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 68.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 68.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 68.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 68.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 68.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 68.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 67.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 67.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 67.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 67.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 67.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 66.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 66.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 66.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 66.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 66.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 66.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 66.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 66.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 66.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 64.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 64.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 64.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 64.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 64.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 64.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 63.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 63.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 63.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 63.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 62.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 62.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 61.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 60.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 60.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 59.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 59.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 58.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 58.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 58.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 57.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 57.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 57.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 57.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 56.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 56.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 56.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 56.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 55.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 55.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 54.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 53.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 53.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 52.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 47.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 46.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 45.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 40.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

92.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 81.4
FF:10164-103B2 76 years, female 81.4
Nucleus accumbens
Scaled Tags Per Million: 52.4
FF:10037-101F1 23-56 years, mixed 52.4
Putamen
Scaled Tags Per Million: 92.4
FF:10176-103C5 60 years, female 92.4
Globus pallidus
Scaled Tags Per Million: 54.0
FF:10161-103A8 76 years, female 78.2
FF:10175-103C4 60 years, female 29.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.8
Pig sample Sample description nTPM
Caudate
nTPM: 80.6
Samples: 4

Max nTPM: 99.9
Min nTPM: 66.0
Sample A Female 66.0
Sample B Female 82.7
Sample C Male 99.9
Sample D Male 73.9
Putamen
nTPM: 87.8
Samples: 4

Max nTPM: 109.5
Min nTPM: 63.2
Sample A Female 63.2
Sample B Female 76.4
Sample C Male 101.9
Sample D Male 109.5
Septum
nTPM: 51.2
Samples: 4

Max nTPM: 56.6
Min nTPM: 47.5
Sample A Female 56.6
Sample B Female 51.3
Sample C Male 47.5
Sample D Male 49.2
Ventral pallidum
nTPM: 65.7
Samples: 4

Max nTPM: 77.5
Min nTPM: 60.0
Sample A Female 64.3
Sample B Female 60.0
Sample C Male 61.1
Sample D Male 77.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 63.5
Samples: 4

Max nTPM: 75.3
Min nTPM: 51.4
Sample A Male 73.3
Sample B Male 75.3
Sample C Female 51.4
Sample D Female 53.8
Septum
nTPM: 37.9
Samples: 4

Max nTPM: 40.2
Min nTPM: 35.5
Sample A Male 39.4
Sample B Male 35.5
Sample C Female 36.3
Sample D Female 40.2
Ventral forebrain
nTPM: 42.5
Samples: 4

Max nTPM: 46.8
Min nTPM: 38.8
Sample A Male 46.8
Sample B Male 43.1
Sample C Female 38.8
Sample D Female 41.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 16.6
69407086 Antisense, RP_050412_02_H02, Mouse strain C57BL/6J (56 days, male) 16.6
Pallidum
Expression energy: 13.2
69407086 Antisense, RP_050412_02_H02, Mouse strain C57BL/6J (56 days, male) 13.2

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