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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
129.2
nTPM
GTEx:
129.2
nTPM
FANTOM5:
86.8
Scaled Tags Per Million
Pig:
112.3
nTPM
Mouse:
61.1
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
129.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 129.2
Samples: 105
Max nTPM: 265.6
Min nTPM: 32.8
Std nTPM: 43.6
Median nTPM:
491_1
89 years, female
265.6
308_1
70 years, female
242.0
379_1
60 years, male
235.8
490_1
67 years, female
212.9
375_1
74 years, female
206.7
142_1
61 years, female
202.4
162_1
79 years, female
198.8
139_1
64 years, female
196.3
173_1
67 years, male
195.9
452_1
88 years, female
194.5
266_1
85 years, male
193.0
415_1
77 years, female
192.6
17_1
71 years, male
191.3
313_1
79 years, female
184.9
35_1
74 years, female
178.1
501_1
88 years, male
177.7
120_1
70 years, female
175.8
315_1
62 years, female
175.2
347_1
72 years, male
169.8
264_1
73 years, female
169.0
396_1
62 years, male
161.9
354_1
81 years, female
161.8
119_1
70 years, female
159.1
4_1
88 years, female
158.9
41_1
94 years, female
157.8
117_1
61 years, male
157.4
317_1
60 years, male
156.6
99_1
64 years, male
156.1
18_1
88 years, male
152.6
324_1
76 years, male
152.0
137_1
83 years, male
150.2
351_1
91 years, male
149.3
322_1
76 years, male
147.4
237_1
82 years, male
147.1
243_1
75 years, male
146.7
145_1
84 years, male
146.3
447_1
81 years, male
146.0
348_1
84 years, male
142.8
265_1
87 years, male
141.3
349_1
83 years, male
140.7
42_1
85 years, male
139.8
229_1
69 years, female
139.5
109_1
81 years, female
138.5
6_1
73 years, female
132.6
394_1
75 years, female
130.3
506_1
65 years, male
128.1
386_1
76 years, male
128.0
414_1
84 years, female
126.4
288_1
66 years, female
126.3
217_1
76 years, male
125.6
318_1
68 years, male
121.7
319_1
81 years, male
121.7
115_1
83 years, male
121.6
314_1
67 years, male
121.6
189_1
76 years, male
121.5
89_1
63 years, male
120.9
316_1
62 years, male
119.8
43_1
64 years, female
118.7
499_1
55 years, female
117.1
307_1
66 years, female
117.0
389_1
86 years, female
116.4
404_1
82 years, female
115.7
384_1
83 years, male
112.9
311_1
78 years, male
111.7
466_1
57 years, female
111.2
246_1
77 years, male
106.9
32_1
67 years, male
106.7
353_1
82 years, female
106.5
153_1
70 years, female
104.6
2_1
77 years, female
104.3
335_1
73 years, female
102.9
295_1
61 years, female
102.0
286_1
68 years, female
99.8
355_1
70 years, female
99.6
126_1
63 years, male
98.6
503_1
68 years, male
98.6
320_1
89 years, female
98.3
517_1
88 years, male
97.1
350_1
84 years, female
96.1
218_1
71 years, female
95.0
413_1
59 years, female
94.7
254_1
77 years, female
93.6
292_1
71 years, male
93.5
9_1
66 years, female
93.4
526_1
61 years, male
92.7
291_1
76 years, male
92.2
405_1
91 years, male
91.6
468_1
89 years, male
87.8
177_1
74 years, male
86.3
149_1
88 years, male
86.0
406_1
79 years, male
85.5
495_1
57 years, female
84.8
425_1
59 years, female
84.4
352_1
62 years, male
81.9
251_1
78 years, male
81.1
377_1
82 years, female
76.8
376_1
75 years, female
75.9
518_1
75 years, female
75.9
356_1
87 years, female
73.3
81_1
67 years, male
72.8
321_1
62 years, female
72.7
172_1
72 years, female
64.2
480_1
63 years, male
53.3
293_1
68 years, female
48.7
163_1
78 years, male
32.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
