Expression of CD74 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

CD74 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 1783.74

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

1356.1

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	12553.6
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	11211.7
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	9891.5
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	8076.1
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	7104.2
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	6832.9
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	6823.4
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	6378.8
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	6174.4
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	5755.8
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	5304.4
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	5278.6
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	5263.0
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	5092.3
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	5043.3
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	5042.0
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	4634.2
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	4548.8
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	4520.5
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	4385.0
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	4167.3
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	3971.0
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	3966.4
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	3867.4
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	3712.9
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	3668.8
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	3593.5
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	3529.9
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	3286.8
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	3176.6
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	3130.5
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	3084.9
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	2969.4
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	2957.2
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	2946.6
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	2921.3
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	2896.8
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	2876.3
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	2737.2
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	2700.6
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	2699.4
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	2619.6
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	2605.3
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	2558.8
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	2546.0
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	2531.6
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	2481.4
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	2477.9
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	2472.0
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	2456.9
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	2412.2
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	2344.2
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	2327.0
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	2322.9
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	2268.7
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	2235.5
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	2221.7
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	2201.3
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	2197.0
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	2187.1
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	2177.2
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	2152.8
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	2112.3
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	2084.1
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	1993.8
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	1979.0
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	1959.2
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	1943.3
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	1935.5
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	1912.9
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	1868.9
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	1864.4
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	1825.8
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	1818.5
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	1783.7
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	1778.9
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	1772.6
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	1771.6
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	1748.8
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	1737.6
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	1718.0
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	1708.2
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	1690.8
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	1662.8
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	1653.6
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	1638.6
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	1633.3
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	1630.2
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	1626.7
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	1625.4
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	1625.0
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	1612.0
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	1605.5
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	1592.7
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	1584.9
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	1584.0
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	1575.5
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	1555.8
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	1523.2
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	1518.5
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	1515.6
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	1499.5
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	1499.5
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	1491.4
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	1486.7
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	1484.2
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	1475.5
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	1474.3
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	1435.9
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	1405.2
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	1402.9
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	1401.6
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	1380.8
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	1378.0
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	1371.4
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	1352.0
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	1351.0
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	1333.4
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	1311.5
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	1288.1
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	1280.2
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	1276.0
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	1262.2
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	1261.4
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	1257.8
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	1254.9
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	1246.5
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	1236.4
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	1236.1
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	1223.1
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	1201.3
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	1193.2
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	1190.7
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	1172.1
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	1167.4
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	1128.7
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	1127.1
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	1124.4
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	1124.2
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	1123.0
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	1120.9
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	1116.8
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	1116.6
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	1098.9
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	1086.9
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	1077.8
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	1058.7
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	1057.0
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	1054.1
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	1036.3
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	1033.2
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	1029.0
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	1028.9
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	1028.3
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	1011.0
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	1009.8
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	1009.8
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	1009.1
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	1009.0
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	987.3
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	982.1
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	977.8
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	977.8
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	969.0
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	966.9
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	964.3
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	954.5
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	934.5
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	921.4
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	915.5
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	912.1
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	903.6
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	897.5
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	885.6
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	872.2
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	871.3
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	867.5
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	866.4
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	863.8
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	851.2
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	845.7
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	845.5
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	844.4
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	842.4
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	839.5
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	839.3
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	839.0
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	831.2
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	824.8
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	820.9
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	816.3
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	807.5
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	807.5
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	801.6
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	796.8
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	796.6
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	793.1
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	792.6
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	791.0
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	789.5
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	789.5
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	784.6
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	781.5
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	778.7
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	778.4
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	775.1
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	774.9
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	767.6
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	765.5
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	748.0
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	743.5
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	743.1
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	738.4
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	736.0
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	735.4
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	734.4
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	730.0
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	728.4
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	708.2
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	683.4
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	682.4
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	669.3
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	669.2
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	667.6
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	660.9
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	656.7
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	654.6
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	637.0
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	630.5
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	630.0
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	620.2
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	617.2
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	615.1
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	612.3
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	612.0
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	602.1
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	597.4
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	591.3
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	588.8
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	562.8
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	560.0
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	559.1
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	557.8
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	557.0
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	554.3
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	554.3
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	523.9
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	516.2
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	514.9
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	513.7
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	511.9
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	510.9
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	501.0
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	497.4
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	489.5
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	487.8
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	482.2
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	479.1
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	476.4
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	464.1
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	460.7
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	459.0
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	450.2
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	449.8
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	442.8
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	440.8
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	437.9
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	437.0
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	430.9
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	429.8
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	428.6
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	426.8
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	421.8
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	421.0
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	419.8
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	417.0
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	410.2
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	407.2
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	405.2
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	404.1
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	399.3
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	399.1
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	397.8
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	390.9
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	390.7
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	385.3
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	384.3
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	382.5
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	370.9
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	368.3
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	364.1
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	360.5
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	358.5
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	357.9
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	357.6
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	350.3
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	346.9
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	331.5
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	326.3
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	324.3
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	319.9
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	314.6
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	312.9
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	312.8
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	310.7
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	304.4
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	303.0
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	300.8
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	290.6
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	289.9
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	289.4
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	289.3
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	286.5
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	286.5
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	284.0
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	282.0
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	278.0
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	277.6
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	277.5
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	274.3
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	272.0
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	271.5
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	270.2
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	270.0
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	270.0
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	268.2
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	265.9
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	265.3
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	258.8
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	254.7
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	252.2
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	251.4
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	244.8
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	243.2
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	242.6
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	242.4
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	235.8
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	216.6
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	215.5
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	200.4
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	194.4
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	193.7
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	184.7
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	183.5
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	181.7
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	179.4
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	175.7
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	173.8
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	172.3
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	171.0
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	168.1
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	165.5
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	141.5
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	127.9
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	120.9
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	119.9
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	115.6
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	109.1
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	99.8
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	99.8
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	73.3
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	65.4
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

CD74 is not prognostic in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 1736.17

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

2645.3

Number of samples

231

Samples

Sample	Description	pTPM
DO23549	74 years, male, NA, stage:3, alive, 990 days	25370.4
DO45277	64 years, male, NA, stage:3, alive, 600 days	19572.2
DO23523	52 years, male, NA, stage:3, alive, 1080 days	18163.9
DO45287	74 years, male, NA, stage:1, alive, 390 days	17018.7
DO23547	74 years, male, NA, stage:1, alive, 1020 days	13865.7
DO50803	62 years, female, NA, stage:1, alive, 540 days	11408.5
DO50829	78 years, male, NA, stage:3, alive, 570 days	11191.9
DO45245	75 years, female, NA, stage:2, dead, 240 days	9543.0
DO23530	53 years, male, NA, stage:4, dead, 180 days	9246.5
DO48747	62 years, male, NA, stage:3, alive, 540 days	9133.5
DO45159	65 years, male, NA, stage:3, alive, 1470 days	8959.5
DO45307	54 years, female, NA, stage:4, dead, 240 days	7838.8
DO45235	68 years, female, NA, stage:1, alive, 900 days	7201.3
DO48732	73 years, male, NA, stage:3, alive, 630 days	7085.1
DO23514	64 years, male, NA, stage:2, alive, 1290 days	6771.1
DO45139	63 years, male, NA, stage:3, alive, 1320 days	6770.1
DO48728	74 years, female, NA, stage:2, alive, 150 days	6571.8
DO45249	57 years, male, NA, stage:1, alive, 630 days	6455.7
DO227801	77 years, female, NA, stage:1, alive, 660 days	6412.4
DO23535	67 years, male, NA, stage:1, alive, 960 days	6201.2
DO50778	60 years, male, NA, stage:4, alive, 630 days	6133.8
DO50787	63 years, male, NA, stage:3, alive, 480 days	6114.5
DO45225	69 years, male, NA, stage:1, alive, 1050 days	5856.9
DO23546	63 years, male, NA, stage:2, alive, 1050 days	5719.9
DO48700	78 years, female, NA, stage:2, alive, 810 days	5715.5
DO23543	63 years, male, NA, stage:2, alive, 1020 days	5617.4
DO48716	71 years, male, NA, stage:2, alive, 720 days	5411.5
DO50800	74 years, male, NA, stage:2, alive, 510 days	5357.8
DO50819	72 years, female, NA, stage:2, alive, 510 days	5275.7
DO45141	73 years, male, NA, stage:2, alive, 1320 days	5269.9
DO45283	60 years, male, NA, stage:3, alive, 510 days	5093.7
DO48720	62 years, female, NA, stage:2, alive, 570 days	5081.6
DO45171	56 years, male, NA, stage:3, alive, 600 days	4966.5
DO45273	62 years, male, NA, stage:2, alive, 480 days	4958.5
DO23542	66 years, male, NA, stage:3, alive, 960 days	4937.8
DO45155	69 years, male, NA, stage:2, alive, 2160 days	4783.1
DO45263	67 years, male, NA, stage:3, dead, 270 days	4593.3
DO50805	72 years, male, NA, stage:2, alive, 690 days	4589.5
DO45093	71 years, male, NA, stage:2, dead, 720 days	4331.1
DO45303	62 years, female, NA, stage:3, alive, 990 days	4284.1
DO45275	65 years, male, NA, stage:3, dead, 10 days	4283.5
DO48672	81 years, male, NA, stage:2, alive, 450 days	4018.5
DO45095	66 years, male, NA, stage:2, alive, 1620 days	4013.4
DO45145	78 years, male, NA, stage:3, dead, 60 days	3974.6
DO45143	69 years, male, NA, stage:3, alive, 1290 days	3945.7
DO45157	62 years, male, NA, stage:2, alive, 1980 days	3832.8
DO45115	81 years, male, NA, stage:2, alive, 840 days	3655.1
DO48730	73 years, female, NA, stage:2, alive, 630 days	3633.5
DO45251	57 years, female, NA, stage:2, alive, 900 days	3633.4
DO45127	73 years, male, NA, stage:3, dead, 420 days	3617.8
DO23536	56 years, male, NA, stage:2, alive, 930 days	3563.2
DO23518	67 years, male, NA, stage:2, alive, 1320 days	3552.5
DO45211	76 years, male, NA, stage:3, alive, 240 days	3549.0
DO45257	46 years, male, NA, stage:3, alive, 810 days	3494.8
DO45181	84 years, female, NA, stage:2, alive, 1200 days	3461.6
DO45135	77 years, male, NA, stage:1, alive, 1410 days	3358.3
DO48704	68 years, female, NA, stage:3, alive, 750 days	3322.4
DO45261	74 years, male, NA, stage:3, alive, 990 days	3116.0
DO23525	71 years, male, NA, stage:4, alive, 1050 days	3101.1
DO23548	78 years, female, NA, stage:1, alive, 840 days	3082.9
DO48697	64 years, female, NA, stage:2, dead, 810 days	3046.4
DO23519	65 years, male, NA, stage:3, alive, 630 days	3013.8
DO48723	73 years, male, NA, stage:1, alive, 600 days	2966.3
DO48693	71 years, male, NA, stage:2, alive, 900 days	2965.5
DO45279	67 years, male, NA, stage:3, alive, 1290 days	2898.2
DO50816	63 years, male, NA, stage:2, alive, 390 days	2888.6
DO50845	72 years, male, NA, stage:3, alive, 210 days	2870.4
DO45285	59 years, male, NA, stage:3, alive, 480 days	2868.6
DO48717	54 years, male, NA, stage:4, dead, 180 days	2819.6
DO23527	72 years, male, NA, stage:1, alive, 1050 days	2784.0
DO50818	65 years, male, NA, stage:2, alive, 510 days	2778.0
DO45153	77 years, female, NA, stage:2, alive, 1380 days	2702.6
DO48712	50 years, male, NA, stage:2, alive, 810 days	2688.7
DO45265	73 years, male, NA, stage:3, alive, 1020 days	2687.5
DO45233	83 years, male, NA, stage:3, alive, 900 days	2655.4
DO48743	69 years, female, NA, stage:2, alive, 570 days	2643.6
DO45092	62 years, male, NA, stage:4, dead, 1200 days	2638.0
DO45099	46 years, male, NA, stage:3, alive, 1590 days	2614.4
DO45223	67 years, male, NA, stage:4, alive, 1020 days	2583.3
DO50776	75 years, male, NA, stage:1, alive, 690 days	2521.1
DO45185	89 years, male, NA, stage:2, alive, 600 days	2494.5
DO45103	47 years, male, NA, stage:3, alive, 450 days	2454.0
DO23540	73 years, male, NA, stage:1, alive, 750 days	2438.7
DO48733	72 years, male, NA, stage:2, alive, 600 days	2437.0
DO50791	79 years, female, NA, stage:1, dead, 480 days	2431.5
DO45231	84 years, male, NA, stage:2, alive, 930 days	2364.1
DO50822	66 years, male, NA, stage:2, alive, 510 days	2353.5
DO23541	65 years, male, NA, stage:2, alive, 930 days	2317.4
DO23524	71 years, female, NA, stage:2, alive, 1050 days	2315.6
DO23515	71 years, male, NA, stage:2, alive, 1230 days	2308.1
DO48761	55 years, male, NA, stage:2, alive, 870 days	2304.4
DO48679	72 years, male, NA, stage:2, alive, 1200 days	2264.9
DO45109	63 years, male, NA, stage:2, alive, 1590 days	2255.5
DO50815	62 years, male, NA, stage:3, alive, 150 days	2194.5
DO23539	77 years, male, NA, stage:1, alive, 1110 days	2186.0
DO45301	56 years, male, NA, stage:2, dead, 1440 days	2168.9
DO45305	66 years, male, NA, stage:4, alive, 300 days	2156.8
DO23510	80 years, female, NA, stage:2, alive, 870 days	2137.2
DO45229	74 years, male, NA, stage:1, alive, 990 days	2085.7
DO45094	76 years, male, NA, stage:3, alive, 1650 days	2080.7
DO45207	68 years, male, NA, stage:1, alive, 1050 days	2054.2
DO23550	69 years, male, NA, stage:1, alive, 990 days	1974.2
DO50799	66 years, female, NA, stage:2, alive, 540 days	1946.5
DO50774	68 years, female, NA, stage:2, alive, 720 days	1917.1
DO45237	58 years, male, NA, stage:2, alive, 900 days	1896.2
DO48725	66 years, male, NA, stage:1, alive, 780 days	1865.8
DO45255	81 years, male, NA, stage:3, alive, 720 days	1865.6
DO45201	49 years, male, NA, stage:1, alive, 900 days	1864.4
DO23531	78 years, female, NA, stage:3, alive, 900 days	1810.4
DO50850	74 years, male, NA, stage:3, alive, 720 days	1736.2
DO45131	53 years, male, NA, stage:4, dead, 360 days	1734.4
DO50806	70 years, male, NA, stage:4, alive, 540 days	1695.2
DO45165	75 years, male, NA, stage:2, alive, 690 days	1689.6
DO45241	49 years, male, NA, stage:1, alive, 1080 days	1678.8
DO50840	49 years, male, NA, stage:2, alive, 330 days	1607.6
DO50809	56 years, male, NA, stage:3, dead, 720 days	1598.0
DO45119	74 years, male, NA, stage:3, dead, 510 days	1594.3
DO50855	47 years, male, NA, stage:2, alive, 570 days	1567.7
DO48736	76 years, female, NA, stage:1, alive, 600 days	1539.9
DO48737	52 years, male, NA, stage:1, alive, 720 days	1518.2
DO45221	75 years, female, NA, stage:4, dead, 390 days	1503.2
DO45177	81 years, female, NA, stage:3, alive, 1260 days	1497.9
DO23551	73 years, male, NA, stage:3, dead, 150 days	1457.0
DO45243	74 years, female, NA, stage:3, alive, 930 days	1450.3
DO45267	73 years, male, NA, stage:3, dead, 570 days	1443.5
DO45281	83 years, male, NA, stage:4, alive, 750 days	1428.6
DO50808	68 years, male, NA, stage:2, alive, 570 days	1396.2
DO23521	63 years, male, NA, stage:3, alive, 1110 days	1372.9
DO45205	67 years, female, NA, stage:2, dead, 90 days	1348.0
DO45253	50 years, male, NA, stage:2, alive, 870 days	1334.8
DO45091	56 years, male, NA, stage:2, dead, 1320 days	1289.1
DO45121	61 years, male, NA, stage:3, alive, 1530 days	1282.5
DO45215	65 years, male, NA, stage:2, alive, 1170 days	1268.8
DO50857	72 years, male, NA, stage:2, alive, 210 days	1251.6
DO45203	71 years, female, NA, stage:2, alive, 1170 days	1245.2
DO45117	73 years, female, NA, stage:2, dead, 1110 days	1232.9
DO45137	38 years, male, NA, stage:1, alive, 1320 days	1227.2
DO48719	80 years, male, NA, stage:2, alive, 690 days	1217.2
DO48759	73 years, male, NA, stage:3, alive, 720 days	1213.1
DO23537	79 years, male, NA, stage:2, dead, 900 days	1210.9
DO48742	76 years, male, NA, stage:2, alive, 600 days	1171.7
DO48715	58 years, female, NA, stage:2, dead, 690 days	1170.6
DO50807	67 years, male, NA, stage:1, alive, 540 days	1166.4
DO227643	79 years, male, NA, stage:2, alive, 1260 days	1153.8
DO23533	61 years, male, NA, stage:2, alive, 900 days	1138.1
DO23512	60 years, male, NA, stage:1, alive, 1260 days	1103.1
DO23532	71 years, female, NA, stage:1, alive, 960 days	1054.7
DO23513	76 years, male, NA, stage:3, alive, 1200 days	1040.4
DO23526	66 years, male, NA, stage:3, alive, 1050 days	1040.1
DO45161	74 years, male, NA, stage:2, dead, 540 days	1039.4
DO48701	78 years, male, NA, stage:2, alive, 780 days	1038.6
DO45105	61 years, male, NA, stage:1, alive, 1680 days	952.4
DO45269	59 years, male, NA, stage:3, alive, 750 days	951.5
DO50813	56 years, male, NA, stage:2, alive, 420 days	935.4
DO45113	58 years, male, NA, stage:3, alive, 1560 days	935.0
DO23544	67 years, male, NA, stage:2, alive, 960 days	933.8
DO45213	58 years, male, NA, stage:1, alive, 1200 days	901.0
DO23511	83 years, female, NA, stage:3, dead, 180 days	874.3
DO45217	69 years, female, NA, stage:3, dead, 270 days	874.3
DO50832	73 years, male, NA, stage:3, alive, 90 days	873.7
DO45193	68 years, female, NA, stage:4, dead, 120 days	853.2
DO48695	77 years, male, NA, stage:2, alive, 720 days	827.2
DO48760	70 years, female, NA, stage:2, alive, 690 days	815.0
DO45189	85 years, female, NA, stage:2, alive, 1200 days	803.6
DO45197	51 years, male, NA, stage:2, alive, 1170 days	773.7
DO45239	42 years, male, NA, stage:2, alive, 870 days	772.3
DO45173	63 years, male, NA, stage:3, alive, 1170 days	771.9
DO50817	75 years, male, NA, stage:2, alive, 390 days	744.9
DO23545	67 years, male, NA, stage:2, dead, 570 days	744.5
DO45101	63 years, male, NA, stage:2, alive, 1680 days	743.2
DO45167	67 years, male, NA, stage:2, dead, 1440 days	716.5
DO48741	64 years, male, NA, stage:3, alive, 240 days	712.1
DO48721	58 years, female, NA, stage:1, alive, 900 days	711.6
DO45299	70 years, female, NA, stage:1, alive, 1440 days	708.0
DO45111	74 years, male, NA, stage:2, alive, 1590 days	707.6
DO23508	79 years, female, NA, stage:2, alive, 390 days	700.0
DO45107	63 years, female, NA, stage:2, alive, 1710 days	692.4
DO50825	70 years, male, NA, stage:2, alive, 390 days	674.0
DO45259	65 years, male, NA, stage:3, alive, 330 days	663.7
DO23529	72 years, male, NA, stage:4, alive, 930 days	638.7
DO50820	77 years, female, NA, stage:3, alive, 510 days	638.1
DO45123	78 years, female, NA, stage:2, dead, 570 days	631.1
DO45183	72 years, female, NA, stage:2, dead, 570 days	630.9
DO50814	83 years, male, NA, stage:3, alive, 420 days	627.2
DO45179	78 years, female, NA, stage:2, alive, 600 days	622.3
DO45219	78 years, male, NA, stage:2, alive, 1080 days	618.5
DO23534	60 years, male, NA, stage:2, alive, 840 days	615.1
DO45169	74 years, male, NA, stage:3, alive, 1350 days	613.4
DO45149	70 years, female, NA, stage:2, alive, 1260 days	613.0
DO45199	86 years, female, NA, stage:2, alive, 1350 days	600.0
DO50802	49 years, male, NA, stage:2, alive, 930 days	584.9
DO50798	77 years, male, NA, stage:3, dead, 30 days	574.7
DO45125	58 years, male, NA, stage:3, alive, 1680 days	548.4
DO45133	64 years, male, NA, stage:3, dead, 660 days	536.8
DO23538	67 years, male, NA, stage:2, alive, 450 days	535.2
DO50783	62 years, male, NA, stage:3, alive, 480 days	532.7
DO45247	31 years, female, NA, stage:2, alive, 210 days	532.5
DO50789	73 years, female, NA, stage:2, alive, 570 days	532.1
DO45297	61 years, female, NA, stage:4, dead, 1260 days	524.3
DO48757	68 years, female, NA, stage:3, alive, 480 days	513.9
DO45163	76 years, male, NA, stage:2, alive, 960 days	504.6
DO23509	60 years, male, NA, stage:3, dead, 780 days	488.1
DO45187	32 years, female, NA, stage:1, alive, 1260 days	485.7
DO45096	69 years, male, NA, stage:2, dead, 1290 days	475.2
DO45129	61 years, male, NA, stage:3, alive, 1470 days	474.8
DO48681	57 years, male, NA, stage:2, alive, 900 days	465.0
DO50793	76 years, male, NA, stage:4, alive, 540 days	461.9
DO45227	57 years, female, NA, stage:2, alive, 1020 days	418.1
DO23552	80 years, female, NA, stage:1, alive, 810 days	408.4
DO45289	78 years, female, NA, stage:3, alive, 360 days	400.8
DO50804	81 years, male, NA, stage:2, alive, 720 days	390.5
DO23517	62 years, male, NA, stage:2, alive, 1200 days	368.3
DO45195	62 years, male, NA, stage:1, alive, 390 days	343.1
DO50839	47 years, female, NA, stage:3, alive, 330 days	336.4
DO50844	75 years, male, NA, stage:4, alive, 300 days	332.9
DO48674	80 years, male, NA, stage:2, alive, 1260 days	329.3
DO45191	61 years, female, NA, stage:2, alive, 1200 days	295.5
DO23528	45 years, female, NA, stage:2, alive, 1020 days	280.0
DO45209	70 years, male, NA, stage:4, alive, 1350 days	276.7
DO45097	69 years, male, NA, stage:3, alive, 1620 days	273.8
DO50785	37 years, male, NA, stage:4, dead, 90 days	268.5
DO48746	76 years, male, NA, stage:3, alive, 570 days	268.3
DO48682	72 years, female, NA, stage:3, dead, 120 days	259.7
DO45175	74 years, male, NA, stage:2, alive, 1140 days	249.5
DO48677	58 years, male, NA, stage:3, alive, 1140 days	239.2
DO48706	72 years, male, NA, stage:2, alive, 870 days	216.7
DO48727	81 years, female, NA, stage:2, dead, 390 days	190.2
DO50859	77 years, male, NA, stage:2, alive, 180 days	173.3
DO50811	62 years, male, NA, stage:1, alive, 450 days	147.1
DO23516	69 years, male, NA, stage:3, dead, 20 days	137.3
DO48751	68 years, male, NA, stage:2, dead, 480 days	68.8
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
861	Tumor	2.2
557	Tumor	2.1
395	Tumor	1.7
211	Tumor	1.7
231	Tumor	1.5
724	Normal	1.5
383	Tumor	1.3
913	Tumor	1.2
978	Normal	1.2
685	Tumor	1.1
353	Tumor	1.1
311	Tumor	1.1
434	Normal	1.1
467	Tumor	1.0
721	Tumor	1.0
814	Normal	1.0
966	Normal	1.0
188	Normal	0.8
262	Normal	0.8
493	Tumor	0.8
755	Tumor	0.8
525	Tumor	0.8
161	Tumor	0.8
195	Tumor	0.8
1015	Tumor	0.8
823	Tumor	0.7
915	Tumor	0.7
914	Normal	0.7
953	Tumor	0.7
937	Tumor	0.7
497	Tumor	0.7
492	Normal	0.7
661	Tumor	0.7
171	Tumor	0.6
213	Tumor	0.6
217	Tumor	0.5
113	Tumor	0.5
355	Tumor	0.5
536	Normal	0.5
917	Tumor	0.5
883	Tumor	0.5
343	Tumor	0.4
981	Tumor	0.4
185	Tumor	0.4
963	Tumor	0.4
212	Normal	0.4
524	Normal	0.4
362	Normal	0.4
478	Normal	0.4
384	Normal	0.4
141	Tumor	0.4
443	Tumor	0.4
867	Tumor	0.4
663	Tumor	0.4
261	Tumor	0.4
375	Tumor	0.4
916	Normal	0.4
1031	Tumor	0.3
192	Normal	0.3
224	Normal	0.3
956	Normal	0.3
145	Tumor	0.3
126	Normal	0.3
455	Tumor	0.3
498	Normal	0.3
187	Tumor	0.3
955	Tumor	0.3
852	Normal	0.3
137	Tumor	0.3
535	Tumor	0.2
444	Normal	0.2
628	Normal	0.2
366	Normal	0.2
191	Tumor	0.2
516	Normal	0.2
272	Normal	0.2
268	Normal	0.2
396	Normal	0.2
857	Tumor	0.2
432	Normal	0.1
386	Normal	0.1
686	Normal	0.1
433	Tumor	0.1
874	Normal	0.1
662	Normal	0.1
952	Normal	0.1
312	Normal	0.1
1042	Normal	0.1
146	Normal	0.1
851	Tumor	0.1
451	Tumor	0.1
468	Normal	0.1
538	Normal	0.1
258	Normal	0.1
284	Normal	0.0
514	Normal	0.0
471	Tumor	0.0
716	Normal	0.0
494	Normal	0.0
1044	Normal	0.0
267	Tumor	0.0
523	Tumor	0.0
884	Normal	0.0
218	Normal	0.0
1027	Tumor	0.0
943	Tumor	0.0
138	Normal	0.0
114	Normal	0.0
297	Tumor	0.0
415	Tumor	0.0
813	Tumor	0.0
627	Tumor	0.0
976	Normal	-0.1
385	Tumor	-0.1
387	Tumor	-0.1
447	Tumor	-0.1
491	Tumor	-0.1
975	Tumor	-0.1
1013	Tumor	-0.1
461	Tumor	-0.1
574	Normal	-0.1
672	Normal	-0.1
456	Normal	-0.1
1045	Tumor	-0.1
421	Tumor	-0.1
142	Normal	-0.1
416	Normal	-0.1
162	Normal	-0.1
696	Normal	-0.1
926	Normal	-0.1
778	Normal	-0.1
922	Normal	-0.2
446	Normal	-0.2
528	Normal	-0.2
965	Tumor	-0.2
865	Tumor	-0.2
954	Normal	-0.2
918	Normal	-0.2
858	Normal	-0.2
487	Tumor	-0.2
283	Tumor	-0.2
554	Normal	-0.2
881	Tumor	-0.2
984	Normal	-0.2
364	Normal	-0.2
665	Tumor	-0.2
563	Tumor	-0.2
172	Normal	-0.2
472	Normal	-0.2
866	Normal	-0.2
818	Normal	-0.3
1028	Normal	-0.3
873	Tumor	-0.3
958	Normal	-0.3
214	Normal	-0.3
573	Tumor	-0.3
363	Tumor	-0.3
1043	Tumor	-0.3
228	Normal	-0.3
391	Tumor	-0.3
148	Normal	-0.3
864	Normal	-0.3
474	Normal	-0.3
124	Normal	-0.3
1016	Normal	-0.3
722	Normal	-0.3
664	Normal	-0.3
427	Tumor	-0.3
327	Tumor	-0.3
642	Normal	-0.3
1022	Normal	-0.3
223	Tumor	-0.3
558	Normal	-0.3
951	Tumor	-0.3
136	Normal	-0.4
356	Normal	-0.4
816	Normal	-0.4
1026	Normal	-0.4
824	Normal	-0.4
368	Normal	-0.4
617	Tumor	-0.4
641	Tumor	-0.4
286	Normal	-0.4
123	Tumor	-0.4
756	Normal	-0.4
877	Tumor	-0.4
868	Normal	-0.4
365	Tumor	-0.4
968	Normal	-0.4
354	Normal	-0.4
424	Normal	-0.4
367	Tumor	-0.4
232	Normal	-0.4
332	Normal	-0.4
111	Normal	-0.4
186	Normal	-0.4
977	Tumor	-0.4
925	Tumor	-0.4
196	Normal	-0.4
341	Tumor	-0.4
352	Normal	-0.4
862	Normal	-0.4
1046	Normal	-0.4
222	Normal	-0.4
944	Normal	-0.4
127	Tumor	-0.4
1032	Normal	-0.4
388	Normal	-0.4
1014	Normal	-0.4
392	Normal	-0.4
924	Normal	-0.4
285	Tumor	-0.4
982	Normal	-0.4
714	Normal	-0.5
526	Normal	-0.5
328	Normal	-0.5
882	Normal	-0.5
278	Normal	-0.5
393	Tumor	-0.5
412	Normal	-0.5
567	Tumor	-0.5
422	Normal	-0.5
738	Normal	-0.5
817	Tumor	-0.5
488	Normal	-0.5
135	Tumor	-0.5
878	Normal	-0.5
728	Normal	-0.5
351	Tumor	-0.5
464	Normal	-0.5
741	Tumor	-0.5
462	Normal	-0.5
298	Normal	-0.5
553	Tumor	-0.5
666	Normal	-0.5
938	Normal	-0.5
376	Normal	-0.5
128	Normal	-0.5
428	Normal	-0.5
518	Normal	-0.5
357	Tumor	-0.5
344	Normal	-0.5
697	Tumor	-0.5
436	Normal	-0.5
483	Tumor	-0.5
648	Normal	-0.5
394	Normal	-0.5
411	Tumor	-0.5
358	Normal	-0.6
616	Normal	-0.6
727	Tumor	-0.6
466	Normal	-0.6
132	Normal	-0.6
912	Normal	-0.6
964	Normal	-0.6
257	Tumor	-0.6
431	Tumor	-0.6
482	Normal	-0.6
713	Tumor	-0.6
786	Normal	-0.6
413	Tumor	-0.6
147	Tumor	-0.6
484	Normal	-0.6
546	Normal	-0.6
221	Tumor	-0.6
1041	Tumor	-0.6
342	Normal	-0.6
564	Normal	-0.7
572	Normal	-0.7
533	Tumor	-0.7
534	Normal	-0.7
545	Tumor	-0.7
448	Normal	-0.7
698	Normal	-0.7
361	Tumor	-0.7
715	Tumor	-0.7
331	Tumor	-0.7
983	Tumor	-0.7
923	Tumor	-0.7
815	Tumor	-0.7
227	Tumor	-0.7
463	Tumor	-0.7
452	Normal	-0.7
957	Tumor	-0.7
568	Normal	-0.8
414	Normal	-0.8
723	Tumor	-0.8
277	Tumor	-0.8
314	Normal	-0.8
911	Tumor	-0.8
863	Tumor	-0.8
744	Normal	-0.8
618	Normal	-0.8
271	Tumor	-0.8
481	Tumor	-0.8
423	Tumor	-0.8
1025	Tumor	-0.9
313	Tumor	-0.9
477	Tumor	-0.9
426	Normal	-0.9
647	Tumor	-0.9
445	Tumor	-0.9
636	Normal	-0.9
571	Tumor	-0.9
742	Normal	-0.9
785	Tumor	-0.9
515	Tumor	-0.9
671	Tumor	-1.0
537	Tumor	-1.0
1021	Tumor	-1.0
746	Normal	-1.0
465	Tumor	-1.0
125	Tumor	-1.1
615	Tumor	-1.1
513	Tumor	-1.1
435	Tumor	-1.1
112	Tumor	-1.2
921	Tumor	-1.2
745	Tumor	-1.2
473	Tumor	-1.2
967	Tumor	-1.3
777	Tumor	-1.3
695	Tumor	-1.3
737	Tumor	-1.4
131	Tumor	-1.4
517	Tumor	-1.4
527	Tumor	-1.4
425	Tumor	-1.5
635	Tumor	-1.9
743	Tumor	-2.1
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA010592	Antibody CAB002506	Antibody CAB079994
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS