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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

159.023
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:158.4 nTPM
HPA Brain:346.3 nTPM
GTEx:158.4 nTPM
Pig:132.9 nTPM
Mouse:230.3 nTPM
Allen mouse:15.5 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA023676
Hypothalamus mean intensity 159.023
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 30.417
Periventricular hypothalamic nucleus 61.303
Supraoptic nucleus 159.023
Tuberal nucleus 21.646
Ventral tuberomammillary nucleus -
Lateral preoptic area 53.188
Medial preoptic area 76.887
Suprachiasmatic nucleus -
Paraventricular hypothalamic nucleus 40.778
Anterior hypothalamic area, central 66.903
Ventral medial hypothalamic nucleus 33.261
Ventral medial hypothalamic nucleus* -
Arcuate nucleus -
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 57.106
Dorsal medial hypothalamic nucleus 28.061
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

346.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 276.3
2226 Male, age 75, left hemisphere 328.6
1961 Female, age 42, unknown 224.0
Dorsomedial nucleus
nTPM: 316.4
1989 Male, age 62, unknown 572.3
2017 Female, age 42, unknown 201.1
2041 Female, age 72, unknown 175.9
Lateral hypothalamic area
nTPM: 346.3
2228 Male, age 66, unknown 440.9
2271 Male, age 75, both hemispheres 396.4
1791 Male, age 80, right hemisphere 345.8
2412 Male, age 62, unknown 201.9
Mammillary body
nTPM: 311.3
1923 Female, age 72, unknown 558.0
2413 Male, age 66, unknown 344.0
1834 Female, age 42, unknown 258.2
1948 Female, age 72, unknown 237.1
1945 Male, age 80, right hemisphere 159.2
Paraventricular nucleus
nTPM: 190.2
2700 Male, age 62, unknown 190.2
Preoptic area
nTPM: 221.1
1907 Male, age 80, right hemisphere 278.7
1861 Female, age 42, unknown 193.0
2414 Female, age 72, unknown 191.7
Supraoptic nucleus
nTPM: 171.7
1894 Female, age 72, unknown 205.5
2835 Female, age 72, unknown 184.0
2043 Male, age 62, unknown 125.6
Ventromedial nucleus
nTPM: 262.9
1982 Female, age 72, unknown 293.0
1822 Female, age 42, unknown 232.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

158.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 158.4
Samples: 202

Max nTPM: 1244.1
Min nTPM: 22.9
Std nTPM: 121.3
Median nTPM: 143.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1244.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1053.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 431.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 399.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 359.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 330.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 300.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 296.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 285.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 281.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 279.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 272.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 271.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 268.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 263.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 257.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 253.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 248.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 247.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 232.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 230.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 229.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 228.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 227.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 227.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 227.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 225.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 224.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 222.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 219.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 219.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 216.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 212.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 211.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 209.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 208.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 208.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 207.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 206.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 204.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 204.3
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 202.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 201.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 201.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 201.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 200.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 199.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 198.5
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 195.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 194.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 194.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 192.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 192.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 191.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 191.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 189.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 189.1
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 188.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 187.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 182.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 180.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 178.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 176.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 174.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 172.3
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 168.6
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 167.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 166.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 165.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 165.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 165.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 165.0
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 164.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 164.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 163.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 162.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 162.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 161.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 161.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 160.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 157.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 157.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 157.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 156.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 156.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 154.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 154.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 153.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 153.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 153.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 152.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 150.2
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 148.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 147.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 147.8
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 147.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 145.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 145.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 144.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 143.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 143.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 142.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 140.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 139.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 139.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 136.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 136.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 135.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 135.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 135.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 135.4
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 134.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 134.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 134.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 133.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 132.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 132.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 132.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 131.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 130.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 130.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 129.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 129.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 127.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 127.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 127.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 126.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 124.1
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 124.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 123.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 122.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 121.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 119.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 118.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 116.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 116.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 115.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 114.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 114.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 113.0
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 112.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 111.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 109.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 107.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 106.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 105.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 104.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 104.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 103.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 103.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 101.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 99.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 98.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 98.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 96.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 94.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 94.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 90.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 90.6
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 90.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 90.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 89.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 85.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 85.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 84.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 83.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 82.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 81.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 81.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 80.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 79.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 76.1
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 75.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 75.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 74.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 72.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 72.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 69.5
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 68.8
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 68.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 66.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 65.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 64.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 63.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 62.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 61.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 50.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 49.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 49.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 48.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 47.5
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 47.1
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 42.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 41.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 38.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 38.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 36.2
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 35.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 31.2
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 31.1
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 25.7
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 22.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 132.9
Samples: 4

Max nTPM: 187.4
Min nTPM: 93.1
Sample A Female 187.4
Sample B Female 133.0
Sample C Male 117.9
Sample D Male 93.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

230.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 230.3
Samples: 4

Max nTPM: 258.9
Min nTPM: 209.0
Sample A Male 241.0
Sample B Male 258.9
Sample C Female 212.1
Sample D Female 209.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 15.5
685 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 15.5
684 Antisense, RP_040315_01_21, Mouse strain C57BL/6J (56 days, male) 14.6

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