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GABRA1
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  • GABRA1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

176.694
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:8.5 nTPM
HPA Brain:134.3 nTPM
GTEx:8.5 nTPM
Pig:59.0 nTPM
Mouse:188.0 nTPM
Allen mouse:8.7 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA055746
Hypothalamus mean intensity 176.694
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus 44.202
Mammillary nucleus -
Periventricular hypothalamic nucleus 150.989
Supraoptic nucleus 104.343
Tuberal nucleus 26.667
Ventral tuberomammillary nucleus 48.430
Lateral preoptic area 45.034
Medial preoptic area 50.068
Suprachiasmatic nucleus 69.466
Paraventricular hypothalamic nucleus 39.084
Anterior hypothalamic area, central 34.127
Ventral medial hypothalamic nucleus 46.858
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 122.802
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 16.007
Dorsal medial hypothalamic nucleus 40.183
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

134.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 19.2
2226 Male, age 75, left hemisphere 23.8
1961 Female, age 42, unknown 14.6
Dorsomedial nucleus
nTPM: 31.9
1989 Male, age 62, unknown 63.0
2017 Female, age 42, unknown 18.5
2041 Female, age 72, unknown 14.1
Lateral hypothalamic area
nTPM: 57.4
2228 Male, age 66, unknown 135.2
1791 Male, age 80, right hemisphere 51.0
2412 Male, age 62, unknown 24.6
2271 Male, age 75, both hemispheres 18.8
Mammillary body
nTPM: 134.3
1923 Female, age 72, unknown 330.3
1834 Female, age 42, unknown 98.2
2413 Male, age 66, unknown 94.0
1948 Female, age 72, unknown 90.6
1945 Male, age 80, right hemisphere 58.4
Paraventricular nucleus
nTPM: 25.1
2700 Male, age 62, unknown 25.1
Preoptic area
nTPM: 34.0
1907 Male, age 80, right hemisphere 44.8
1861 Female, age 42, unknown 38.8
2414 Female, age 72, unknown 18.4
Supraoptic nucleus
nTPM: 15.3
2835 Female, age 72, unknown 22.8
1894 Female, age 72, unknown 11.6
2043 Male, age 62, unknown 11.3
Ventromedial nucleus
nTPM: 18.1
1982 Female, age 72, unknown 22.9
1822 Female, age 42, unknown 13.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 8.5
Samples: 202

Max nTPM: 88.0
Min nTPM: 0.0
Std nTPM: 10.9
Median nTPM: 6.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 88.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 76.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 73.8
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 52.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 42.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 30.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 24.9
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 24.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 22.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 21.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 20.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 20.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 20.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 19.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 19.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 19.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 17.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 17.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 17.2
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 16.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 16.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 15.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 15.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 14.9
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 14.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 14.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 13.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 13.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 13.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 13.1
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 13.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 12.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 12.1
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 12.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 10.7
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 10.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 10.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 10.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 10.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 10.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 10.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 10.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 10.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 10.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 9.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 9.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 9.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 9.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 9.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 9.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 9.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 9.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 9.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 8.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 8.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 8.6
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 8.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 8.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 8.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 8.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 8.1
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 7.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 7.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 7.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 7.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 7.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 7.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 7.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 7.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 7.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 7.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 7.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 7.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 7.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 7.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 7.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 7.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 7.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 6.9
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 6.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 6.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 6.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 6.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 6.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 6.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 6.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 6.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 6.5
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 6.5
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 6.5
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 6.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 6.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 6.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 6.4
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 6.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 6.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 6.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 6.3
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 6.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 6.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 6.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 6.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 6.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 5.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 5.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 5.8
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 5.8
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 5.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 5.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 5.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 5.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 5.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 5.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 5.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 5.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 5.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 5.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 5.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 5.0
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 4.9
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 4.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 4.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 4.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 4.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 4.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 4.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 4.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 4.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 4.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 4.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 4.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 4.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 4.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 4.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 4.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 4.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 4.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 4.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 4.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 4.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 4.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 4.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 4.1
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 4.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 4.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 4.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 4.0
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 4.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 3.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 3.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 3.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 3.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 3.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 3.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 3.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 3.3
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 3.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 3.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 3.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 2.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 2.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 2.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 2.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 2.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 2.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 2.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 2.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 2.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 2.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 2.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 2.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 2.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 2.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 2.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 2.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 2.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 2.4
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 2.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 2.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 2.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 2.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 2.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 1.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 1.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 1.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 1.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 1.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 1.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 1.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 1.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 1.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 1.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 1.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 0.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 0.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 0.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 0.5
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 0.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 0.4
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 0.3
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 0.0
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 0.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.0
Pig sample Sample description nTPM
Hypothalamus
nTPM: 59.0
Samples: 4

Max nTPM: 72.8
Min nTPM: 45.9
Sample A Female 67.1
Sample B Female 72.8
Sample C Male 45.9
Sample D Male 50.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

188.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 188.0
Samples: 4

Max nTPM: 206.1
Min nTPM: 170.2
Sample A Male 170.2
Sample B Male 186.5
Sample C Female 206.1
Sample D Female 189.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.7
72340131 Antisense, RP_051101_02_A09, Mouse strain C57BL/6J (56 days, male) 11.3
69856453 Antisense, RP_050331_02_B11, Mouse strain C57BL/6J (56 days, male) 6.1

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