We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RNH1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RNH1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:86.1 nTPM
HPA Brain:76.7 nTPM
GTEx:86.1 nTPM
FANTOM5:124.6 Scaled Tags Per Million
Pig:36.9 nTPM
Mouse:50.9 nTPM
Allen mouse:0.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA039223Antibody HPA040781
Glial cells Not detectedNot detected
Neuronal cells LowLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 44.3
2481 Female, age 94, left hemisphere 52.9
2289 Male, age 61, right hemisphere 50.6
2288 Male, age 75, left hemisphere 49.3
2290 Female, age 72, unknown 42.2
2846 Female, age 79, unknown 41.8
1781 Male, age 74, unknown 41.1
1854 Male, age 80, left hemisphere 39.6
1857 Female, age 85, left hemisphere 36.6
Globus pallidus, externus
nTPM: 75.2
1996 Male, age 80, right hemisphere 92.4
2772 Female, age 79, unknown 86.2
2567 Female, age 72, unknown 68.7
2646 Male, age 61, right hemisphere 66.1
2395 Male, age 75, both hemispheres 62.3
Globus pallidus, internus
nTPM: 76.7
2111 Female, age 85, right hemisphere 107.9
2778 Female, age 91, both hemispheres 78.4
2287 Male, age 75, right hemisphere 78.1
2566 Female, age 72, unknown 77.3
1818 Male, age 74, unknown 67.6
2037 Male, age 80, right hemisphere 67.0
2483 Female, age 94, right hemisphere 61.0
Nucleus accumbens
nTPM: 47.6
2732 Male, age 80, right hemisphere 54.8
2286 Male, age 75, left hemisphere 53.6
2391 Female, age 94, left hemisphere 50.4
1806 Female, age 85, left hemisphere 48.7
1783 Male, age 74, unknown 46.9
2698 Female, age 72, unknown 44.7
2824 Male, age 61, right hemisphere 44.6
1856 Female, age 91, right hemisphere 37.2
Nucleus basalis of Meynert
nTPM: 47.2
2569 Male, age 61, both hemispheres 61.7
2484 Female, age 94, left hemisphere 46.9
2821 Male, age 75, both hemispheres 42.2
2393 Male, age 80, right hemisphere 38.0
Nucleus of the diagonal band
nTPM: 32.3
1812 Female, age 91, both hemispheres 35.9
1979 Male, age 74, unknown 33.5
2029 Male, age 61, right hemisphere 33.1
2775 Male, age 80, right hemisphere 30.3
2195 Female, age 85, both hemispheres 28.8
Putamen
nTPM: 44.3
2482 Female, age 94, left hemisphere 55.6
1829 Male, age 74, unknown 46.1
2647 Male, age 75, left hemisphere 44.8
2466 Female, age 79, unknown 44.1
2489 Female, age 72, unknown 43.9
1937 Female, age 91, right hemisphere 42.5
1838 Male, age 80, right hemisphere 33.3
Septal nuclei
nTPM: 35.7
2394 Male, age 61, left hemisphere 42.2
2059 Female, age 85, both hemispheres 41.7
2199 Male, age 80, right hemisphere 37.8
1960 Male, age 74, unknown 33.0
2629 Female, age 94, right hemisphere 32.6
2009 Female, age 91, both hemispheres 32.0
2031 Female, age 72, unknown 30.7
Stria terminalis, bed nucleus
nTPM: 36.0
1974 Female, age 91, both hemispheres 39.2
2201 Male, age 74, unknown 34.6
2486 Female, age 94, both hemispheres 34.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 70.9
Samples: 246

Max nTPM: 119.9
Min nTPM: 23.7
Std nTPM: 15.2
Median nTPM: 69.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 119.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 114.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 114.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 112.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 111.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 107.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 105.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 104.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 104.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 104.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 104.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 103.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 99.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 97.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 97.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 95.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 94.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 92.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 92.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 91.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 91.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 91.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 90.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 90.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 90.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 90.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 89.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 89.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 89.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 87.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 87.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 87.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 87.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 86.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 86.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 86.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 86.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 86.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 84.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 84.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 83.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 83.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 83.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 83.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 82.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 82.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 82.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 82.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 81.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 81.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 81.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 81.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 81.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 81.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 80.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 80.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 80.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 80.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 80.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 80.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 79.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 79.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 79.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 79.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 78.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 78.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 78.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 78.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 78.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 77.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 77.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 77.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 77.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 77.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 77.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 77.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 77.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 77.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 76.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 76.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 76.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 76.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 76.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 76.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 76.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 75.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 75.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 75.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 75.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 75.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 75.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 75.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 74.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 74.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 74.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 74.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 74.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 73.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 73.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 73.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 73.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 73.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 73.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 72.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 72.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 72.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 72.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 72.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 72.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 72.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 71.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 71.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 71.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 71.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 71.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 71.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 70.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 70.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 70.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 70.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 70.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 69.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 69.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 69.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 69.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 69.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 69.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 68.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 68.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 68.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 68.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 68.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 68.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 67.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 67.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 67.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 67.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 67.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 67.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 67.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 67.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 67.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 66.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 66.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 66.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 66.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 66.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 65.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 65.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 65.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 65.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 65.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 65.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 65.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 65.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 65.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 64.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 64.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 64.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 64.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 64.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 64.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 64.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 64.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 63.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 63.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 63.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 63.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 63.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 63.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 62.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 62.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 62.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 62.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 62.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 62.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 62.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 62.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 62.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 61.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 61.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 60.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 60.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 60.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 60.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 60.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 59.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 59.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 59.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 59.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 58.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 58.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 58.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 58.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 58.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 57.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 57.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 57.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 57.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 57.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 57.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 57.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 57.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 56.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 56.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 56.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 56.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 56.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 56.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 55.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 55.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 55.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 54.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 54.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 54.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 54.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 53.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 53.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 53.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 53.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 53.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 52.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 52.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 52.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 52.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 52.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 52.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 50.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 50.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 50.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 50.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 50.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 49.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 48.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 48.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 48.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 47.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 47.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 47.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 47.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 46.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 46.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 45.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 39.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 33.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 23.7
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 66.4
Samples: 246

Max nTPM: 120.4
Min nTPM: 31.2
Std nTPM: 12.3
Median nTPM: 65.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 120.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 98.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 97.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 95.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 93.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 93.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 92.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 92.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 92.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 91.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 90.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 89.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 87.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 87.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 86.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 85.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 85.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 84.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 84.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 84.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 84.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 83.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 83.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 83.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 82.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 82.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 81.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 81.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 80.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 80.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 80.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 80.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 79.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 79.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 79.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 79.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 79.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 79.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 79.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 79.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 79.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 78.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 78.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 77.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 77.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 77.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 76.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 76.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 76.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 75.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 75.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 75.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 75.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 75.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 75.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 75.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 74.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 74.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 74.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 74.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 74.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 73.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 73.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 73.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 73.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 73.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 72.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 72.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 72.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 72.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 72.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 72.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 72.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 72.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 71.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 71.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 71.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 71.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 71.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 70.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 70.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 70.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 70.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 70.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 70.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 70.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 69.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 69.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 69.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 69.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 69.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 69.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 69.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 68.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 68.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 68.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 68.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 68.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 68.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 68.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 68.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 67.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 67.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 67.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 67.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 67.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 67.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 66.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 66.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 66.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 66.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 66.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 66.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 65.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 65.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 65.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 65.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 65.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 65.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 65.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 65.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 65.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 65.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 65.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 64.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 64.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 64.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 64.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 64.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 64.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 64.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 63.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 63.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 63.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 63.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 63.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 63.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 63.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 63.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 63.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 63.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 62.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 62.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 62.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 62.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 62.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 62.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 62.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 62.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 62.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 62.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 62.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 61.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 61.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 61.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 61.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 61.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 61.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 61.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 60.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 60.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 60.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 60.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 60.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 60.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 60.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 60.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 60.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 60.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 60.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 60.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 60.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 59.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 59.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 59.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 59.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 59.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 59.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 59.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 59.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 59.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 59.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 59.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 59.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 59.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 59.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 59.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 58.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 58.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 58.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 58.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 58.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 58.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 58.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 58.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 57.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 56.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 56.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 56.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 56.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 56.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 55.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 55.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 55.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 55.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 55.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 55.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 55.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 54.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 54.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 53.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 53.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 53.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 53.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 53.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 53.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 52.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 52.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 52.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 52.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 52.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 51.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 51.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 51.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 50.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 50.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 50.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 50.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 49.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 48.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 48.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 48.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 47.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 47.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 47.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 47.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 46.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 46.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 46.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 46.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 45.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 44.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 41.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 40.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 37.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 31.2
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 86.1
Samples: 205

Max nTPM: 166.9
Min nTPM: 43.6
Std nTPM: 20.9
Median nTPM: 84.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 166.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 162.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 150.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 139.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 138.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 138.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 135.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 126.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 122.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 121.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 118.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 118.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 116.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 116.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 115.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 113.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 113.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 112.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 112.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 112.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 111.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 111.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 111.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 109.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 109.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 108.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 107.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 106.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 106.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 106.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 104.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 104.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 103.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 103.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 103.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 102.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 102.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 102.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 102.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 101.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 101.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 101.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 101.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 101.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 100.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 100.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 100.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 98.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 98.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 98.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 98.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 98.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 98.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 98.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 97.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 97.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 97.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 96.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 96.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 96.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 96.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 96.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 95.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 95.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 95.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 95.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 94.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 94.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 94.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 94.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 94.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 94.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 94.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 94.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 93.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 92.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 92.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 91.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 91.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 91.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 91.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 90.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 90.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 89.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 89.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 89.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 88.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 88.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 88.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 88.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 88.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 87.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 86.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 86.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 86.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 86.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 86.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 85.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 85.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 85.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 85.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 85.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 84.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 84.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 83.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 83.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 82.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 82.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 82.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 82.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 82.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 81.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 81.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 81.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 80.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 80.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 80.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 80.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 79.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 79.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 78.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 78.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 77.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 77.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 77.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 77.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 77.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 77.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 76.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 76.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 76.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 76.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 75.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 75.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 75.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 75.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 74.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 74.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 74.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 74.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 73.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 73.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 73.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 73.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 73.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 72.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 72.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 72.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 72.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 72.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 72.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 72.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 71.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 71.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 71.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 70.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 70.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 69.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 69.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 69.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 69.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 68.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 68.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 68.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 68.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 68.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 67.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 67.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 67.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 66.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 66.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 66.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 66.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 65.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 65.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 65.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 65.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 65.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 64.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 64.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 64.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 64.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 63.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 63.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 62.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 61.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 60.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 60.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 60.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 59.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 59.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 59.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 58.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 58.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 56.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 51.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 51.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 51.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 50.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 50.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 50.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 50.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 47.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 43.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 43.6
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

124.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 81.7
FF:10164-103B2 76 years, female 81.7
Nucleus accumbens
Scaled Tags Per Million: 86.6
FF:10037-101F1 23-56 years, mixed 86.6
Putamen
Scaled Tags Per Million: 90.7
FF:10176-103C5 60 years, female 90.7
Globus pallidus
Scaled Tags Per Million: 124.6
FF:10175-103C4 60 years, female 138.1
FF:10161-103A8 76 years, female 111.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.9
Pig sample Sample description nTPM
Caudate
nTPM: 30.8
Samples: 4

Max nTPM: 35.2
Min nTPM: 27.1
Sample A Female 27.1
Sample B Female 35.2
Sample C Male 33.3
Sample D Male 27.5
Putamen
nTPM: 35.6
Samples: 4

Max nTPM: 41.5
Min nTPM: 26.7
Sample A Female 41.5
Sample B Female 26.7
Sample C Male 36.1
Sample D Male 38.2
Septum
nTPM: 36.9
Samples: 4

Max nTPM: 43.5
Min nTPM: 31.7
Sample A Female 35.5
Sample B Female 31.7
Sample C Male 43.5
Sample D Male 37.0
Ventral pallidum
nTPM: 35.8
Samples: 4

Max nTPM: 44.4
Min nTPM: 26.0
Sample A Female 26.0
Sample B Female 39.2
Sample C Male 44.4
Sample D Male 33.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 43.6
Samples: 4

Max nTPM: 47.6
Min nTPM: 39.3
Sample A Male 46.6
Sample B Male 47.6
Sample C Female 39.3
Sample D Female 40.7
Septum
nTPM: 50.9
Samples: 4

Max nTPM: 52.0
Min nTPM: 49.9
Sample A Male 49.9
Sample B Male 51.1
Sample C Female 52.0
Sample D Female 50.7
Ventral forebrain
nTPM: 42.4
Samples: 4

Max nTPM: 47.7
Min nTPM: 38.9
Sample A Male 38.9
Sample B Male 47.7
Sample C Female 43.8
Sample D Female 39.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.7
74800925 Antisense, RP_060315_02_A09, Mouse strain C57BL/6J (56 days, male) 1.0
413828 Antisense, RP_040809_01_H06, Mouse strain C57BL/6J (56 days, male) 0.4
Pallidum
Expression energy: 0.9
74800925 Antisense, RP_060315_02_A09, Mouse strain C57BL/6J (56 days, male) 1.4
413828 Antisense, RP_040809_01_H06, Mouse strain C57BL/6J (56 days, male) 0.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org