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AKAP11
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:23.0 nTPM
HPA Brain:118.3 nTPM
GTEx:23.0 nTPM
FANTOM5:132.4 Scaled Tags Per Million
Pig:177.9 nTPM
Mouse:84.3 nTPM
Allen mouse:10.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA039089
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 108.0
1857 Female, age 85, left hemisphere 133.2
1854 Male, age 80, left hemisphere 122.5
2846 Female, age 79, unknown 120.1
2290 Female, age 72, unknown 112.1
1781 Male, age 74, unknown 97.2
2288 Male, age 75, left hemisphere 96.5
2289 Male, age 61, right hemisphere 91.7
2481 Female, age 94, left hemisphere 90.6
Globus pallidus, externus
nTPM: 69.1
2395 Male, age 75, both hemispheres 96.0
2772 Female, age 79, unknown 75.2
1996 Male, age 80, right hemisphere 62.2
2646 Male, age 61, right hemisphere 56.5
2567 Female, age 72, unknown 55.4
Globus pallidus, internus
nTPM: 77.5
2287 Male, age 75, right hemisphere 112.0
2483 Female, age 94, right hemisphere 103.1
2778 Female, age 91, both hemispheres 82.1
1818 Male, age 74, unknown 66.6
2111 Female, age 85, right hemisphere 62.8
2037 Male, age 80, right hemisphere 58.6
2566 Female, age 72, unknown 57.4
Nucleus accumbens
nTPM: 118.3
2824 Male, age 61, right hemisphere 154.0
1856 Female, age 91, right hemisphere 151.3
1806 Female, age 85, left hemisphere 130.2
1783 Male, age 74, unknown 129.0
2698 Female, age 72, unknown 114.1
2391 Female, age 94, left hemisphere 99.1
2286 Male, age 75, left hemisphere 94.6
2732 Male, age 80, right hemisphere 73.7
Nucleus basalis of Meynert
nTPM: 83.9
2393 Male, age 80, right hemisphere 105.0
2484 Female, age 94, left hemisphere 89.0
2821 Male, age 75, both hemispheres 81.6
2569 Male, age 61, both hemispheres 59.8
Nucleus of the diagonal band
nTPM: 109.9
1812 Female, age 91, both hemispheres 132.1
2775 Male, age 80, right hemisphere 115.7
2029 Male, age 61, right hemisphere 109.2
2195 Female, age 85, both hemispheres 107.5
1979 Male, age 74, unknown 85.0
Putamen
nTPM: 103.6
1838 Male, age 80, right hemisphere 149.7
1937 Female, age 91, right hemisphere 121.1
2466 Female, age 79, unknown 115.9
1829 Male, age 74, unknown 111.5
2482 Female, age 94, left hemisphere 86.7
2647 Male, age 75, left hemisphere 76.0
2489 Female, age 72, unknown 64.3
Septal nuclei
nTPM: 91.9
2031 Female, age 72, unknown 125.4
1960 Male, age 74, unknown 106.2
2009 Female, age 91, both hemispheres 99.1
2629 Female, age 94, right hemisphere 94.0
2059 Female, age 85, both hemispheres 73.4
2199 Male, age 80, right hemisphere 73.0
2394 Male, age 61, left hemisphere 72.2
Stria terminalis, bed nucleus
nTPM: 90.4
1974 Female, age 91, both hemispheres 104.6
2486 Female, age 94, both hemispheres 96.5
2201 Male, age 74, unknown 70.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 18.1
Samples: 246

Max nTPM: 63.7
Min nTPM: 5.5
Std nTPM: 7.6
Median nTPM: 16.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 63.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 40.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 38.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 37.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 34.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 34.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 34.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 34.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 33.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 33.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 33.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 32.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 32.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 31.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 31.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 31.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 31.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 30.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 30.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 30.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 30.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 30.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 29.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 29.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 28.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 28.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 28.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 27.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 27.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 27.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 27.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 27.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 27.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 26.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 26.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 26.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 25.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 25.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 25.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 25.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 24.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 24.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 24.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 24.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 24.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 24.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 24.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 23.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 23.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 23.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 23.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 23.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 23.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 23.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 23.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 22.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 22.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 22.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 22.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 22.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 22.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 22.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 22.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 21.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 21.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 21.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 21.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 21.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 21.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 21.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 21.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 21.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 21.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 20.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 20.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 20.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 20.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 20.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 20.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 20.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 20.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 20.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 20.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 20.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 19.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 19.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 19.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 19.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 19.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 19.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 19.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 19.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 19.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 19.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 18.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 18.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 18.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 18.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 18.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 18.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 18.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 18.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 18.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 17.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 17.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 17.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 17.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 17.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 17.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 17.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 17.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 17.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 17.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 17.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 17.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 17.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 17.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 17.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 17.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 16.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 16.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 16.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 16.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 16.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 16.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 16.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 16.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 16.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 16.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 16.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 16.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 16.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 15.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 15.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 15.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 15.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 15.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 15.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 15.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 15.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 15.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 15.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 15.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 15.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 15.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 15.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 15.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 15.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 15.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 14.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 14.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 14.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 14.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 14.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 14.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 14.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 14.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 14.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 14.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 14.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 14.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 14.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 13.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 13.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 13.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 13.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 13.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 13.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 13.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 13.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 13.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 13.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 13.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 13.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 13.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 13.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 13.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 12.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 12.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 12.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 12.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 12.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 12.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 12.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 12.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 12.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 12.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 12.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 12.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 12.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 12.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 12.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 12.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 12.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 12.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 11.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 11.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 11.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 11.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 11.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 11.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 11.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 11.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 11.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 11.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 10.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 10.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 10.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 10.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 10.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 10.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 10.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 10.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 10.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 10.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 10.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 10.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 10.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 10.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 9.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 9.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 9.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 9.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 9.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 9.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 9.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 9.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 9.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 9.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 9.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 9.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 9.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 9.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 9.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 8.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 8.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 8.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 8.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 8.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 8.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 8.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 8.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 8.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 7.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 6.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 5.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 23.0
Samples: 246

Max nTPM: 55.2
Min nTPM: 5.5
Std nTPM: 9.3
Median nTPM: 22.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 55.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 51.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 50.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 50.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 45.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 42.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 42.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 41.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 41.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 39.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 38.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 38.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 37.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 37.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 37.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 36.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 36.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 36.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 35.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 35.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 35.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 35.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 34.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 34.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 34.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 34.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 34.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 34.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 34.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 33.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 33.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 33.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 33.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 33.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 33.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 32.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 32.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 32.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 32.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 32.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 32.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 32.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 31.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 31.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 31.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 31.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 31.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 31.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 31.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 30.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 30.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 30.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 30.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 30.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 30.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 30.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 30.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 30.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 29.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 29.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 29.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 29.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 29.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 29.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 29.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 29.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 29.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 28.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 28.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 28.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 28.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 28.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 28.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 28.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 28.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 28.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 27.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 27.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 27.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 27.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 27.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 27.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 27.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 27.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 27.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 26.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 26.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 26.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 26.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 26.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 26.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 26.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 26.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 26.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 26.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 25.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 25.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 25.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 25.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 25.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 25.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 24.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 24.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 24.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 24.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 24.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 24.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 24.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 24.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 23.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 23.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 23.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 23.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 23.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 23.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 23.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 23.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 23.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 23.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 23.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 22.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 22.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 22.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 22.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 22.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 22.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 22.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 22.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 22.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 21.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 21.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 21.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 21.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 21.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 21.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 21.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 21.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 21.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 21.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 20.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 20.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 20.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 20.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 20.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 20.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 20.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 20.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 20.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 20.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 20.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 20.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 20.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 19.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 19.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 19.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 19.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 19.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 19.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 19.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 18.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 18.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 18.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 18.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 18.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 18.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 18.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 18.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 18.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 17.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 17.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 17.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 17.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 17.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 16.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 16.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 16.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 16.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 16.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 16.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 15.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 15.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 15.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 15.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 15.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 14.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 14.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 14.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 14.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 14.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 14.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 13.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 13.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 13.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 13.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 13.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 13.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 13.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 13.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 13.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 13.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 13.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 13.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 13.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 13.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 13.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 13.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 12.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 12.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 12.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 12.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 12.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 12.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 12.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 12.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 11.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 11.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 11.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 11.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 11.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 11.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 11.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 11.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 10.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 10.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 10.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 10.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 10.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 10.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 10.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 10.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 10.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 9.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 9.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 9.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 9.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 9.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 8.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 8.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 8.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 8.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 7.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 7.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 7.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 7.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 6.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 5.5
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Brain - Putamen (basal ganglia)
Average nTPM: 16.4
Samples: 205

Max nTPM: 37.5
Min nTPM: 5.4
Std nTPM: 6.4
Median nTPM: 15.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 37.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 36.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 35.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 35.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 32.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 32.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 30.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 29.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 28.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 28.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 27.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 26.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 26.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 26.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 26.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 26.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 26.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 25.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 25.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 25.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 24.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 24.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 24.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 24.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 23.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 23.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 23.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 23.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 23.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 23.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 23.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 23.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 22.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 22.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 22.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 22.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 22.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 21.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 21.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 21.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 21.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 21.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 21.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 20.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 20.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 20.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 20.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 20.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 20.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 20.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 20.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 20.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 20.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 20.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 20.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 20.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 20.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 20.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 19.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 19.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 19.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 19.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 19.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 19.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 19.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 18.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 18.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 18.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 18.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 18.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 18.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 18.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 18.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 18.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 17.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 17.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 17.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 17.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 17.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 17.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 16.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 16.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 16.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 16.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 16.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 16.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 16.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 16.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 16.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 16.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 16.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 16.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 16.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 15.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 15.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 15.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 15.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 15.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 15.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 15.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 15.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 15.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 15.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 15.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 15.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 15.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 15.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 15.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 14.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 14.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 14.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 14.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 14.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 14.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 14.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 14.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 14.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 14.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 14.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 14.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 14.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 14.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 14.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 14.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 14.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 13.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 13.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 13.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 13.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 13.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 13.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 13.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 13.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 13.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 13.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 13.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 13.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 12.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 12.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 12.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 12.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 12.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 12.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 12.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 12.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 12.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 12.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 12.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 12.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 11.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 11.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 11.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 11.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 11.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 11.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 11.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 11.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 11.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 11.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 11.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 11.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 11.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 11.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 11.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 11.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 11.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 11.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 10.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 10.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 10.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 10.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 10.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 10.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 9.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 9.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 9.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 9.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 9.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 8.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 8.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 8.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 8.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 8.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 8.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 8.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 8.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 8.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 8.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 8.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 8.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 7.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 7.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 7.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 7.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 7.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 7.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 7.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 7.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 7.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 7.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 6.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 6.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 6.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 5.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 5.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

132.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 87.6
FF:10164-103B2 76 years, female 87.6
Nucleus accumbens
Scaled Tags Per Million: 62.6
FF:10037-101F1 23-56 years, mixed 62.6
Putamen
Scaled Tags Per Million: 132.4
FF:10176-103C5 60 years, female 132.4
Globus pallidus
Scaled Tags Per Million: 56.9
FF:10175-103C4 60 years, female 66.7
FF:10161-103A8 76 years, female 47.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

177.9
Pig sample Sample description nTPM
Caudate
nTPM: 161.8
Samples: 4

Max nTPM: 190.3
Min nTPM: 128.9
Sample A Female 128.9
Sample B Female 156.3
Sample C Male 190.3
Sample D Male 171.8
Putamen
nTPM: 177.9
Samples: 4

Max nTPM: 256.4
Min nTPM: 93.4
Sample A Female 93.4
Sample B Female 175.1
Sample C Male 256.4
Sample D Male 186.7
Septum
nTPM: 120.8
Samples: 4

Max nTPM: 130.8
Min nTPM: 105.0
Sample A Female 130.8
Sample B Female 130.3
Sample C Male 116.9
Sample D Male 105.0
Ventral pallidum
nTPM: 146.3
Samples: 4

Max nTPM: 158.9
Min nTPM: 134.1
Sample A Female 158.9
Sample B Female 134.1
Sample C Male 145.1
Sample D Male 146.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 84.3
Samples: 4

Max nTPM: 87.8
Min nTPM: 77.1
Sample A Male 87.8
Sample B Male 85.5
Sample C Female 77.1
Sample D Female 86.9
Septum
nTPM: 72.2
Samples: 4

Max nTPM: 74.1
Min nTPM: 69.8
Sample A Male 71.0
Sample B Male 73.7
Sample C Female 69.8
Sample D Female 74.1
Ventral forebrain
nTPM: 71.3
Samples: 4

Max nTPM: 76.4
Min nTPM: 68.4
Sample A Male 68.4
Sample B Male 76.4
Sample C Female 70.1
Sample D Female 70.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 10.8
69526516 Antisense, RP_050421_01_A04, Mouse strain C57BL/6J (56 days, male) 10.8
Pallidum
Expression energy: 7.0
69526516 Antisense, RP_050421_01_A04, Mouse strain C57BL/6J (56 days, male) 7.0

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