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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:55.9 nTPM
HPA Brain:86.0 nTPM
GTEx:55.9 nTPM
FANTOM5:299.1 Scaled Tags Per Million
Pig:90.3 nTPM
Mouse:120.2 nTPM
Allen mouse:4.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA027320Antibody HPA055557
Glial cells HighNot detected
Neuronal cells LowLow




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 74.6
2481 Female, age 94, left hemisphere 93.5
2288 Male, age 75, left hemisphere 82.8
2290 Female, age 72, unknown 73.6
1781 Male, age 74, unknown 73.4
1857 Female, age 85, left hemisphere 72.2
2846 Female, age 79, unknown 72.0
1854 Male, age 80, left hemisphere 64.9
2289 Male, age 61, right hemisphere 64.3
Globus pallidus, externus
nTPM: 64.0
2395 Male, age 75, both hemispheres 77.1
2772 Female, age 79, unknown 74.5
1996 Male, age 80, right hemisphere 66.5
2646 Male, age 61, right hemisphere 56.8
2567 Female, age 72, unknown 44.8
Globus pallidus, internus
nTPM: 62.6
2287 Male, age 75, right hemisphere 88.2
2483 Female, age 94, right hemisphere 80.1
2778 Female, age 91, both hemispheres 61.4
1818 Male, age 74, unknown 59.6
2037 Male, age 80, right hemisphere 58.0
2566 Female, age 72, unknown 47.5
2111 Female, age 85, right hemisphere 43.6
Nucleus accumbens
nTPM: 73.8
2286 Male, age 75, left hemisphere 86.7
1856 Female, age 91, right hemisphere 85.7
2391 Female, age 94, left hemisphere 79.0
2698 Female, age 72, unknown 73.6
1783 Male, age 74, unknown 72.6
1806 Female, age 85, left hemisphere 72.3
2824 Male, age 61, right hemisphere 64.0
2732 Male, age 80, right hemisphere 56.2
Nucleus basalis of Meynert
nTPM: 60.4
2484 Female, age 94, left hemisphere 63.7
2821 Male, age 75, both hemispheres 63.7
2393 Male, age 80, right hemisphere 60.2
2569 Male, age 61, both hemispheres 53.8
Nucleus of the diagonal band
nTPM: 86.0
1812 Female, age 91, both hemispheres 101.4
2775 Male, age 80, right hemisphere 100.0
2195 Female, age 85, both hemispheres 85.7
1979 Male, age 74, unknown 73.9
2029 Male, age 61, right hemisphere 69.2
Putamen
nTPM: 65.8
2482 Female, age 94, left hemisphere 79.3
2466 Female, age 79, unknown 72.5
1937 Female, age 91, right hemisphere 70.4
1838 Male, age 80, right hemisphere 68.4
1829 Male, age 74, unknown 63.3
2647 Male, age 75, left hemisphere 56.6
2489 Female, age 72, unknown 49.8
Septal nuclei
nTPM: 76.1
1960 Male, age 74, unknown 94.8
2031 Female, age 72, unknown 94.0
2009 Female, age 91, both hemispheres 79.5
2629 Female, age 94, right hemisphere 75.2
2059 Female, age 85, both hemispheres 70.1
2199 Male, age 80, right hemisphere 63.1
2394 Male, age 61, left hemisphere 55.7
Stria terminalis, bed nucleus
nTPM: 77.3
1974 Female, age 91, both hemispheres 92.9
2486 Female, age 94, both hemispheres 71.0
2201 Male, age 74, unknown 68.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 51.8
Samples: 246

Max nTPM: 103.5
Min nTPM: 28.2
Std nTPM: 11.3
Median nTPM: 50.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 103.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 92.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 89.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 89.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 87.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 82.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 80.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 76.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 75.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 74.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 74.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 73.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 72.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 71.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 70.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 68.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 67.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 66.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 66.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 66.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 65.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 65.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 64.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 64.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 64.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 64.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 64.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 64.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 64.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 63.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 63.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 62.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 62.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 62.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 62.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 62.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 62.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 61.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 61.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 61.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 61.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 61.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 61.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 61.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 60.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 60.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 60.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 60.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 59.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 59.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 59.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 59.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 59.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 59.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 59.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 59.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 58.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 58.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 58.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 58.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 57.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 57.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 57.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 57.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 56.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 56.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 56.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 56.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 56.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 56.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 56.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 56.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 55.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 55.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 55.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 55.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 55.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 55.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 55.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 55.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 55.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 55.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 54.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 54.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 54.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 54.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 54.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 54.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 54.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 54.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 54.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 54.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 53.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 53.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 53.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 53.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 53.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 53.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 53.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 53.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 52.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 52.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 52.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 52.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 52.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 51.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 51.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 51.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 51.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 51.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 51.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 51.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 50.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 50.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 50.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 50.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 50.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 50.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 50.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 50.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 50.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 50.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 50.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 50.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 50.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 50.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 50.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 49.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 49.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 49.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 49.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 49.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 49.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 49.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 49.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 49.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 49.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 49.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 49.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 49.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 49.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 49.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 49.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 49.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 49.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 48.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 48.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 48.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 48.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 48.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 47.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 47.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 47.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 47.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 47.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 47.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 46.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 46.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 46.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 46.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 46.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 46.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 46.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 46.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 46.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 46.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 45.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 45.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 45.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 45.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 45.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 45.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 45.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 45.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 45.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 45.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 45.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 45.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 45.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 45.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 44.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 44.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 44.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 44.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 44.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 44.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 44.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 44.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 43.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 43.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 43.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 43.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 43.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 43.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 43.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 42.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 42.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 42.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 41.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 41.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 41.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 41.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 41.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 40.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 40.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 40.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 40.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 40.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 40.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 40.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 40.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 40.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 40.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 40.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 40.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 40.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 40.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 39.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 39.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 39.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 39.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 39.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 39.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 38.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 38.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 38.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 38.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 38.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 38.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 38.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 37.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 37.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 37.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 37.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 37.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 36.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 35.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 34.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 34.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 34.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 33.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 33.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 33.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 32.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 28.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 28.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 55.9
Samples: 246

Max nTPM: 120.8
Min nTPM: 23.5
Std nTPM: 14.2
Median nTPM: 54.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 120.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 98.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 89.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 88.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 84.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 81.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 80.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 80.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 80.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 80.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 79.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 79.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 79.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 78.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 77.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 76.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 76.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 76.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 76.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 76.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 76.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 75.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 75.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 75.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 74.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 74.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 73.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 73.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 73.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 72.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 72.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 71.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 71.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 71.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 71.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 71.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 71.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 70.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 70.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 70.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 69.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 69.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 68.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 68.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 68.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 68.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 68.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 67.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 67.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 67.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 67.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 67.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 67.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 67.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 66.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 66.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 66.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 66.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 66.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 65.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 65.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 65.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 65.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 65.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 65.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 65.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 65.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 64.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 64.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 64.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 64.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 64.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 64.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 63.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 63.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 63.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 63.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 62.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 62.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 62.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 62.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 62.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 62.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 62.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 60.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 60.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 60.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 60.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 60.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 60.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 60.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 60.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 60.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 60.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 59.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 59.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 59.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 59.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 59.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 58.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 58.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 58.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 58.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 58.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 58.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 58.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 58.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 58.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 57.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 56.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 56.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 56.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 56.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 56.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 56.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 56.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 55.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 55.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 55.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 55.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 54.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 54.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 54.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 54.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 54.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 54.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 54.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 54.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 53.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 53.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 53.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 53.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 53.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 53.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 53.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 53.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 52.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 52.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 52.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 52.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 52.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 52.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 52.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 52.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 52.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 52.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 51.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 51.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 51.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 51.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 51.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 51.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 50.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 50.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 50.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 50.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 50.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 50.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 50.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 50.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 50.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 49.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 49.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 49.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 49.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 49.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 48.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 48.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 48.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 48.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 48.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 48.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 47.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 47.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 47.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 46.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 46.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 46.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 46.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 46.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 46.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 45.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 45.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 45.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 45.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 45.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 45.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 45.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 45.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 45.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 44.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 44.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 44.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 44.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 44.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 43.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 43.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 43.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 43.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 43.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 43.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 42.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 42.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 42.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 42.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 41.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 41.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 41.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 41.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 41.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 41.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 41.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 41.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 40.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 40.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 40.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 40.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 40.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 39.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 39.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 39.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 38.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 38.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 38.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 38.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 37.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 36.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 36.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 35.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 35.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 35.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 35.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 33.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 33.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 33.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 32.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 31.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 31.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 30.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 30.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 29.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 28.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 27.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 27.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 24.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 23.5
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Brain - Putamen (basal ganglia)
Average nTPM: 50.0
Samples: 205

Max nTPM: 97.2
Min nTPM: 26.0
Std nTPM: 10.3
Median nTPM: 49.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 97.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 95.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 75.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 70.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 70.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 69.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 69.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 68.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 67.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 67.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 66.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 66.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 66.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 65.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 65.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 65.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 64.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 64.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 63.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 62.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 62.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 62.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 61.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 61.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 61.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 61.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 60.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 60.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 60.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 60.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 60.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 59.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 59.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 59.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 59.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 59.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 58.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 58.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 58.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 58.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 58.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 57.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 57.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 57.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 56.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 56.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 56.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 55.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 55.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 55.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 55.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 55.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 55.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 55.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 55.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 54.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 54.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 54.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 54.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 54.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 54.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 54.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 53.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 53.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 53.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 53.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 53.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 53.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 53.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 52.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 52.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 52.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 52.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 52.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 52.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 51.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 51.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 51.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 51.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 51.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 51.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 51.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 51.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 51.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 50.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 50.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 50.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 50.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 50.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 50.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 50.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 50.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 50.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 50.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 50.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 50.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 50.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 49.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 49.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 49.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 49.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 49.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 49.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 49.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 49.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 49.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 49.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 49.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 48.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 48.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 48.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 48.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 48.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 48.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 48.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 48.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 48.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 48.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 48.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 47.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 47.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 47.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 47.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 47.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 47.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 47.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 47.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 46.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 46.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 46.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 46.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 46.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 46.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 46.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 46.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 46.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 46.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 45.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 45.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 45.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 45.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 45.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 45.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 45.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 44.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 44.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 44.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 44.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 44.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 44.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 43.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 43.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 43.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 43.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 43.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 43.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 42.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 42.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 42.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 42.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 42.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 42.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 42.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 42.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 41.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 41.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 41.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 41.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 41.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 40.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 40.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 40.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 39.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 39.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 39.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 39.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 39.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 38.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 38.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 38.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 38.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 37.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 37.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 37.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 37.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 37.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 37.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 36.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 36.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 36.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 35.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 35.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 35.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 35.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 34.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 33.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 33.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 32.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 32.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 32.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 31.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 30.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 30.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 29.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 26.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

299.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 254.7
FF:10164-103B2 76 years, female 254.7
Nucleus accumbens
Scaled Tags Per Million: 190.6
FF:10037-101F1 23-56 years, mixed 190.6
Putamen
Scaled Tags Per Million: 299.1
FF:10176-103C5 60 years, female 299.1
Globus pallidus
Scaled Tags Per Million: 247.8
FF:10175-103C4 60 years, female 296.6
FF:10161-103A8 76 years, female 199.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.3
Pig sample Sample description nTPM
Caudate
nTPM: 75.1
Samples: 4

Max nTPM: 82.2
Min nTPM: 67.2
Sample A Female 74.8
Sample B Female 76.3
Sample C Male 82.2
Sample D Male 67.2
Putamen
nTPM: 90.3
Samples: 4

Max nTPM: 127.4
Min nTPM: 74.0
Sample A Female 82.4
Sample B Female 74.0
Sample C Male 127.4
Sample D Male 77.2
Septum
nTPM: 89.4
Samples: 4

Max nTPM: 107.8
Min nTPM: 77.7
Sample A Female 91.2
Sample B Female 77.7
Sample C Male 107.8
Sample D Male 80.7
Ventral pallidum
nTPM: 79.5
Samples: 4

Max nTPM: 86.1
Min nTPM: 71.1
Sample A Female 74.9
Sample B Female 86.1
Sample C Male 85.8
Sample D Male 71.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 104.6
Samples: 4

Max nTPM: 107.5
Min nTPM: 101.5
Sample A Male 107.5
Sample B Male 104.4
Sample C Female 101.5
Sample D Female 105.0
Septum
nTPM: 120.2
Samples: 4

Max nTPM: 132.3
Min nTPM: 109.2
Sample A Male 109.2
Sample B Male 132.3
Sample C Female 125.5
Sample D Female 113.9
Ventral forebrain
nTPM: 103.9
Samples: 4

Max nTPM: 112.2
Min nTPM: 98.4
Sample A Male 98.4
Sample B Male 104.5
Sample C Female 112.2
Sample D Female 100.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.5
69816936 Antisense, RP_050510_02_C05, Mouse strain C57BL/6J (56 days, male) 8.9
70795527 Antisense, RP_050712_01_G05, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 3.8
69816936 Antisense, RP_050510_02_C05, Mouse strain C57BL/6J (56 days, male) 7.5
70795527 Antisense, RP_050712_01_G05, Mouse strain C57BL/6J (56 days, male) 0.0

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