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HSD17B6
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  • HSD17B6
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Low
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: Medium
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:8.5 nTPM
HPA Brain:9.9 nTPM
GTEx:8.5 nTPM
FANTOM5:7.3 Scaled Tags Per Million
Pig:9.7 nTPM
Mouse:0.0 nTPM
Allen mouse:0.1 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA059141
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Low
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Not detected
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Not detected
Molecular layer - neuropil Not detected
Molecular layer cells - cytoplasm/membrane Medium
Molecular layer cells - nucleus Not detected
Processes in granular layer Not detected
Processes in molecular layer Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Not detected


CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.9
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 9.9
1768 Female, age 72, unknown 12.3
2003 Female, age 85, right hemisphere 12.2
2006 Male, age 61, right hemisphere 11.6
1774 Male, age 80, left hemisphere 10.0
2101 Male, age 74, right hemisphere 10.0
1769 Male, age 76, right hemisphere 8.7
2055 Female, age 91, right hemisphere 8.1
1788 Male, age 55, unknown 6.4
Cerebellar nuclei
nTPM: 7.8
2175 Male, age 61, right hemisphere 10.8
2783 Female, age 72, unknown 10.8
2005 Male, age 80, left hemisphere 10.4
1966 Female, age 91, left hemisphere 8.1
2177 Female, age 85, both hemispheres 7.3
2318 Male, age 74, left hemisphere 7.1
1879 Male, age 55, unknown 5.8
1871 Male, age 74, unknown 5.3
2882 Male, age 76, left hemisphere 5.0
Flocculonodular lobe
nTPM: 8.2
1767 Male, age 76, left hemisphere 11.0
1765 Male, age 55, unknown 10.6
1835 Female, age 85, right hemisphere 8.0
1792 Male, age 74, unknown 7.8
2176 Female, age 91, right hemisphere 7.6
1771 Male, age 80, left hemisphere 7.4
2004 Male, age 61, right hemisphere 5.2
Vermis
nTPM: 8.4
1751 Male, age 74, right hemisphere 13.4
1928 Female, age 72, unknown 9.7
1770 Male, age 76, left hemisphere 9.4
2834 Male, age 80, left hemisphere 9.1
1778 Female, age 91, left hemisphere 8.8
1766 Male, age 55, unknown 8.5
1988 Female, age 85, left hemisphere 6.2
1825 Male, age 74, unknown 5.9
2460 Male, age 61, both hemispheres 4.8

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.5
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 6.5
Samples: 215

Max nTPM: 16.6
Min nTPM: 2.4
Std nTPM: 2.4
Median nTPM: 6.1
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 16.6
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 16.2
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 14.5
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 14.5
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 12.9
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 12.6
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 12.4
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 12.0
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 11.5
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 10.9
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 10.8
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 10.5
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 10.4
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 10.3
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 10.1
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 10.0
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 10.0
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 9.9
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 9.8
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 9.7
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 9.6
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 9.5
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 9.3
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 9.3
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 9.2
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 9.2
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 9.0
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 9.0
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 8.9
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 8.9
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 8.9
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 8.8
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 8.7
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 8.7
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 8.6
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 8.5
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 8.5
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 8.4
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 8.4
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 8.4
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 8.3
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 8.2
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 8.2
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 8.2
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 8.2
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 8.2
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 8.1
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 8.0
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 8.0
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 8.0
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 8.0
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 8.0
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 8.0
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 8.0
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 7.9
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 7.8
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 7.8
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 7.8
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 7.7
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 7.7
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 7.6
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 7.6
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 7.6
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 7.5
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 7.5
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 7.4
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 7.4
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 7.4
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 7.3
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 7.3
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 7.3
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 7.3
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 7.3
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 7.2
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 7.2
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 7.2
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 7.2
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 7.1
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 7.1
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 7.0
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 6.9
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 6.9
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 6.9
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 6.9
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 6.8
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 6.8
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 6.8
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 6.7
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 6.7
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 6.7
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 6.7
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 6.6
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 6.6
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 6.6
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 6.5
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 6.5
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 6.5
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 6.5
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 6.4
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 6.4
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 6.3
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 6.3
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 6.3
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 6.2
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 6.2
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 6.2
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 6.1
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 6.1
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 6.1
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 6.0
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 6.0
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 6.0
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 5.9
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 5.9
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 5.9
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 5.9
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 5.8
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 5.8
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 5.8
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 5.8
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 5.8
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 5.7
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 5.7
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 5.7
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 5.6
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 5.6
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 5.6
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 5.5
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 5.5
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 5.5
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 5.4
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 5.4
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 5.4
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 5.4
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 5.4
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 5.3
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 5.3
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 5.3
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 5.2
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 5.2
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 5.1
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 5.1
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 5.1
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 5.0
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 5.0
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 4.9
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 4.9
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 4.9
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 4.9
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 4.9
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 4.8
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 4.8
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 4.7
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 4.7
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 4.7
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 4.7
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 4.7
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 4.6
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 4.6
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 4.6
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 4.6
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 4.6
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 4.5
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 4.5
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 4.5
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 4.5
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 4.5
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 4.5
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 4.4
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 4.4
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 4.4
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 4.4
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 4.4
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 4.4
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 4.4
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 4.3
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 4.3
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 4.3
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 4.3
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 4.2
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 4.1
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 4.1
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 4.1
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 4.1
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 4.0
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 4.0
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 4.0
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 4.0
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 4.0
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 3.9
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 3.9
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 3.8
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 3.8
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 3.8
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 3.8
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 3.8
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 3.8
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 3.7
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 3.7
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 3.6
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 3.6
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 3.6
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 3.5
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 3.4
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 3.4
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 3.3
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 3.2
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 3.2
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 3.0
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 3.0
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 3.0
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 2.7
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 2.7
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 2.6
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 2.4
Show allShow less
Brain - Cerebellum
Average nTPM: 8.5
Samples: 241

Max nTPM: 23.3
Min nTPM: 2.5
Std nTPM: 3.0
Median nTPM: 8.0
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 23.3
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 19.8
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 18.5
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 17.2
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 15.8
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 15.7
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 15.7
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 15.4
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 14.5
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 14.3
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 14.1
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 14.0
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 13.7
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 13.7
GTEX-17HII-2926-SM-79OMK 50-59 years, male 13.5
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 13.4
GTEX-11ONC-3026-SM-5985W 60-69 years, male 13.3
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 13.1
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 13.0
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 13.0
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 12.8
GTEX-12126-0926-SM-5FQTW 20-29 years, male 12.6
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 12.6
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 12.5
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 12.5
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 12.5
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 12.5
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 12.4
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 12.4
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 12.3
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 12.3
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 12.1
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 12.0
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 12.0
GTEX-13112-2926-SM-5DUWT 50-59 years, male 11.8
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 11.6
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 11.5
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 11.4
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 11.4
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 11.3
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 11.2
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 11.1
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 11.0
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 10.9
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 10.8
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 10.8
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 10.8
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 10.8
GTEX-144GL-2926-SM-5O99F 50-59 years, male 10.7
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 10.7
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 10.7
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 10.6
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 10.4
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 10.4
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 10.2
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 10.2
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 10.2
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 10.2
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 10.1
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 10.1
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 10.0
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 10.0
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 10.0
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 9.9
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 9.9
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 9.9
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 9.7
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 9.7
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 9.7
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 9.6
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 9.6
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 9.6
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 9.6
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 9.6
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 9.6
GTEX-RU72-2926-SM-2TF66 50-59 years, female 9.6
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 9.5
GTEX-18465-2926-SM-7KFSE 50-59 years, male 9.4
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 9.4
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 9.4
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 9.4
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 9.4
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 9.3
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 9.3
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 9.2
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 9.2
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 9.2
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 9.1
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 9.1
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 8.9
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 8.8
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 8.8
GTEX-11DYG-2926-SM-5H132 60-69 years, male 8.7
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 8.7
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 8.7
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 8.6
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 8.5
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 8.5
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 8.5
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 8.5
GTEX-1192X-3226-SM-5987D 50-59 years, male 8.4
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 8.4
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 8.4
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 8.4
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 8.4
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 8.3
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 8.3
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 8.3
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 8.3
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 8.2
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 8.2
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 8.2
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 8.2
GTEX-11EI6-2926-SM-5985U 60-69 years, male 8.1
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 8.1
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 8.1
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 8.1
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 8.1
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 8.1
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 8.0
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 8.0
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 8.0
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 8.0
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 7.9
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 7.9
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 7.9
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 7.8
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 7.8
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 7.8
GTEX-1B933-3026-SM-731DB 50-59 years, female 7.8
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 7.7
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 7.7
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 7.7
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 7.7
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 7.7
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 7.6
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 7.6
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 7.5
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 7.5
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 7.5
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 7.5
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 7.5
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 7.5
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 7.5
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 7.5
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 7.5
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 7.4
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 7.4
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 7.3
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 7.3
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 7.3
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 7.2
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 7.2
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 7.2
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 7.2
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 7.1
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 7.1
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 7.1
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 7.0
GTEX-15G19-2826-SM-6M48K 60-69 years, male 7.0
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 7.0
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 7.0
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 7.0
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 6.9
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 6.9
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 6.9
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 6.8
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 6.8
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 6.8
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 6.8
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 6.8
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 6.7
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 6.6
GTEX-X261-3126-SM-4PQZC 50-59 years, male 6.6
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 6.5
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 6.5
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 6.5
GTEX-11NUK-3026-SM-5986K 50-59 years, male 6.4
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 6.4
GTEX-14ABY-3026-SM-664NE 50-59 years, male 6.4
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 6.4
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 6.4
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 6.3
GTEX-17EVP-2926-SM-793BU 40-49 years, male 6.3
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 6.3
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 6.3
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 6.2
GTEX-145LS-3026-SM-5O99S 60-69 years, female 6.2
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 6.2
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 6.2
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 6.1
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 6.1
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 6.1
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 6.1
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 6.1
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 5.9
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 5.9
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 5.8
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 5.8
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 5.8
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 5.8
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 5.7
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 5.7
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 5.7
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 5.6
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 5.6
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 5.5
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 5.5
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 5.4
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 5.4
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 5.4
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 5.4
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 5.4
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 5.4
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 5.3
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 5.2
GTEX-14PN4-3026-SM-664O4 50-59 years, male 5.2
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 5.2
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 5.2
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 5.2
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 5.1
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 4.9
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 4.9
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 4.8
GTEX-14E6D-2926-SM-664OP 50-59 years, male 4.8
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 4.7
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 4.7
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 4.7
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 4.6
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 4.5
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 4.5
GTEX-WL46-2826-SM-3LK81 50-59 years, male 4.5
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 4.4
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 4.3
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 4.2
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 3.8
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 3.7
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 3.4
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 3.3
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 2.8
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 2.5
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

7.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 7.3
FF:10083-102B2 22-68 years, mixed 10.4
FF:10166-103B4 76 years, female 4.3

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.7
Pig sample Sample description nTPM
Cerebellum
nTPM: 9.8
Samples: 4

Max nTPM: 11.0
Min nTPM: 8.4
Sample A Female 8.4
Sample B Female 8.9
Sample C Male 10.7
Sample D Male 11.0

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.0
Mouse sample Sample description nTPM
Cerebellum
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 0.1
75990827 Antisense, RP_060608_01_F04, Mouse strain C57BL/6J (56 days, male) 0.1

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