We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SLAMF7
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • SLAMF7
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SLAMF7
Synonyms 19A, CD319, CRACC, CS1
Gene descriptioni

Full gene name according to HGNC.

SLAM family member 7
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

CD markers
FDA approved drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband q23.3
Chromosome location (bp) 160739057 - 160754821
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

9
Ensembl ENSG00000026751 (version 109)
Entrez gene 57823
HGNC HGNC:21394
UniProt Q9NQ25 (UniProt - Evidence at protein level)
neXtProt NX_Q9NQ25
GeneCards SLAMF7
Antibodypedia SLAMF7 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Self-ligand receptor of the signaling lymphocytic activation molecule (SLAM) family. SLAM receptors triggered by homo-or heterotypic cell-cell interactions are modulating the activation and differentiation of a wide variety of immune cells and thus are involved in the regulation and interconnection of both innate and adaptive immune response. Activities are controlled by presence or absence of small cytoplasmic adapter proteins, SH2D1A/SAP and/or SH2D1B/EAT-2. Isoform 1 mediates NK cell activation through a SH2D1A-independent extracellular signal-regulated ERK-mediated pathway 1. Positively regulates NK cell functions by a mechanism dependent on phosphorylated SH2D1B. Downstream signaling implicates PLCG1, PLCG2 and PI3K 2. In addition to heterotypic NK cells-target cells interactions also homotypic interactions between NK cells may contribute to activation. However, in the absence of SH2D1B, inhibits NK cell function. Acts also inhibitory in T-cells (By similarity). May play a role in lymphocyte adhesion 3. In LPS-activated monocytes negatively regulates production of pro-inflammatory cytokines 4.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Receptor
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Adaptive immunity, Immunity, Innate immunity
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables identical protein binding activity. Predicted to be involved in adaptive immune response. Predicted to act upstream of or within regulation of natural killer cell activation. Located in endoplasmic reticulum. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SLAMF7-201
ENSP00000352281
ENST00000359331
Q9NQ25
[Direct mapping] SLAM family member 7
Show all
CD markers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
FDA approved drug targets
   Biotech drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0002250 [adaptive immune response]
GO:0002376 [immune system process]
GO:0005886 [plasma membrane]
GO:0007155 [cell adhesion]
GO:0009897 [external side of plasma membrane]
GO:0016020 [membrane]
GO:0030101 [natural killer cell activation]
GO:0042110 [T cell activation]
GO:0042267 [natural killer cell mediated cytotoxicity]
GO:0042802 [identical protein binding]
GO:0045087 [innate immune response]
Show all
296 aa
32.6 kDa
Yes 1
SLAMF7-202
ENSP00000357021
ENST00000368042
Q9NQ25
[Direct mapping] SLAM family member 7
Show all
CD markers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
FDA approved drug targets
   Biotech drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0002250 [adaptive immune response]
GO:0002376 [immune system process]
GO:0005886 [plasma membrane]
GO:0007155 [cell adhesion]
GO:0009897 [external side of plasma membrane]
GO:0016020 [membrane]
GO:0030101 [natural killer cell activation]
GO:0042110 [T cell activation]
GO:0042267 [natural killer cell mediated cytotoxicity]
GO:0042802 [identical protein binding]
GO:0045087 [innate immune response]
Show all
228 aa
25.8 kDa
Yes 1
SLAMF7-203
ENSP00000357022
ENST00000368043
Q9NQ25
[Direct mapping] SLAM family member 7
Show all
CD markers
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
FDA approved drug targets
   Biotech drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0002250 [adaptive immune response]
GO:0002376 [immune system process]
GO:0005886 [plasma membrane]
GO:0007155 [cell adhesion]
GO:0009897 [external side of plasma membrane]
GO:0016020 [membrane]
GO:0030101 [natural killer cell activation]
GO:0042110 [T cell activation]
GO:0042267 [natural killer cell mediated cytotoxicity]
GO:0042802 [identical protein binding]
GO:0045087 [innate immune response]
Show all
335 aa
37.4 kDa
Yes 1
SLAMF7-204
ENSP00000405605
ENST00000441662
Q9NQ25
[Direct mapping] SLAM family member 7
Show all
CD markers
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
FDA approved drug targets
   Biotech drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002250 [adaptive immune response]
GO:0002376 [immune system process]
GO:0005886 [plasma membrane]
GO:0007155 [cell adhesion]
GO:0009897 [external side of plasma membrane]
GO:0016020 [membrane]
GO:0030101 [natural killer cell activation]
GO:0042110 [T cell activation]
GO:0042267 [natural killer cell mediated cytotoxicity]
GO:0042802 [identical protein binding]
GO:0045087 [innate immune response]
Show all
204 aa
22.8 kDa
Yes 0
SLAMF7-205
ENSP00000416592
ENST00000444090
Q9NQ25
[Direct mapping] SLAM family member 7
Show all
CD markers
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
FDA approved drug targets
   Biotech drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002250 [adaptive immune response]
GO:0002376 [immune system process]
GO:0005886 [plasma membrane]
GO:0007155 [cell adhesion]
GO:0009897 [external side of plasma membrane]
GO:0016020 [membrane]
GO:0030101 [natural killer cell activation]
GO:0042110 [T cell activation]
GO:0042267 [natural killer cell mediated cytotoxicity]
GO:0042802 [identical protein binding]
GO:0045087 [innate immune response]
Show all
165 aa
17.9 kDa
Yes 0
SLAMF7-206
ENSP00000403294
ENST00000458104
B4DVL7
[Direct mapping] SLAM family member 7; cDNA FLJ60003, moderately similar to SLAM family member 7
Show all
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
149 aa
16.5 kDa
Yes 0
SLAMF7-207
ENSP00000409965
ENST00000458602
Q9NQ25
[Direct mapping] SLAM family member 7
Show all
CD markers
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
FDA approved drug targets
   Biotech drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0002250 [adaptive immune response]
GO:0002376 [immune system process]
GO:0005886 [plasma membrane]
GO:0007155 [cell adhesion]
GO:0009897 [external side of plasma membrane]
GO:0016020 [membrane]
GO:0030101 [natural killer cell activation]
GO:0042110 [T cell activation]
GO:0042267 [natural killer cell mediated cytotoxicity]
GO:0042802 [identical protein binding]
GO:0045087 [innate immune response]
Show all
188 aa
21.3 kDa
Yes 0
SLAMF7-210
ENSP00000473590
ENST00000495334
R4GND0
[Direct mapping] SLAM family member 7
Show all
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
236 aa
25.8 kDa
Yes 0
SLAMF7-211
ENSP00000483774
ENST00000621377
B4DW98
[Direct mapping] SLAM family member 7; cDNA FLJ54735, highly similar to SLAM family member 7
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005783 [endoplasmic reticulum]
GO:0016020 [membrane]
Show all
241 aa
27.3 kDa
Yes 1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org