HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:46.1 nTPM
HPA Brain:36.6 nTPM
GTEx:46.1 nTPM
FANTOM5:103.0 Scaled Tags Per Million
Pig:13.6 nTPM
Mouse:15.2 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063871Antibody CAB025889Antibody CAB080493Antibody CAB080494Antibody CAB080495
Glial cells Not detectedNot detectedNot detectedNot detectedLow
Neuronal cells Not detectedNot detectedLowHighHigh








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 36.6
Sample id Sample description nTPM
Hippocampus
nTPM: 35.8
2621 Female, age 67, right hemisphere 40.8
1898 Male, age 80, left hemisphere 40.6
1911 Female, age 85, right hemisphere 36.2
2529 Female, age 94, left hemisphere 35.0
1855 Male, age 76, left hemisphere 34.6
2148 Female, age 91, left hemisphere 27.6
Dentate gyrus
nTPM: 32.6
2010 Male, age 76, both hemispheres 40.1
2530 Female, age 94, left hemisphere 39.8
2246 Female, age 85, both hemispheres 30.2
2528 Male, age 74, both hemispheres 29.3
1927 Female, age 91, both hemispheres 29.2
2531 Female, age 67, both hemispheres 27.2
Entorhinal gyrus
nTPM: 26.3
2117 Female, age 91, right hemisphere 33.0
1787 Male, age 76, left hemisphere 29.9
1938 Female, age 85, left hemisphere 26.7
2764 Male, age 80, right hemisphere 23.9
2686 Male, age 75, right hemisphere 22.7
2613 Female, age 94, left hemisphere 21.4
Hippocampus, CA1
nTPM: 30.6
1873 Female, age 85, both hemispheres 32.8
2082 Female, age 91, right hemisphere 32.1
2749 Male, age 80, left hemisphere 30.6
2045 Male, age 76, both hemispheres 28.9
2527 Male, age 74, both hemispheres 28.8
Hippocampus, CA2
nTPM: 36.6
1940 Female, age 85, left hemisphere 45.7
1892 Male, age 76, both hemispheres 37.8
2437 Female, age 94, left hemisphere 35.9
2113 Female, age 91, right hemisphere 35.2
1963 Male, age 80, left hemisphere 32.9
2249 Male, age 74, both hemispheres 32.3
Hippocampus, CA3
nTPM: 30.5
1867 Male, age 76, both hemispheres 43.7
1891 Female, age 85, both hemispheres 35.2
2861 Female, age 67, both hemispheres 29.6
2436 Male, age 74, both hemispheres 29.5
2137 Male, age 80, left hemisphere 22.6
2620 Female, age 94, left hemisphere 22.5
Parahippocampal cortex
nTPM: 27.5
2018 Male, age 76, both hemispheres 41.7
2250 Female, age 67, right hemisphere 34.4
1850 Male, age 80, both hemispheres 29.5
2532 Female, age 72, left hemisphere 28.7
1990 Female, age 91, right hemisphere 27.2
1933 Female, age 85, both hemispheres 26.0
2693 Female, age 94, both hemispheres 24.9
2245 Female, age 91, both hemispheres 24.4
2692 Male, age 74, both hemispheres 19.5
2622 Female, age 67, right hemisphere 18.3
Perirhinal gyrus
nTPM: 28.4
1841 Female, age 85, right hemisphere 31.6
1847 Female, age 91, left hemisphere 28.9
2521 Female, age 94, right hemisphere 28.1
1794 Male, age 80, right hemisphere 27.2
2848 Male, age 76, right hemisphere 26.2
Subiculum
nTPM: 34.8
2042 Male, age 76, both hemispheres 46.3
2729 Female, age 91, right hemisphere 35.6
1901 Male, age 80, both hemispheres 35.2
2438 Female, age 94, left hemisphere 33.4
1977 Female, age 85, both hemispheres 29.6
2619 Male, age 74, both hemispheres 29.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 46.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.1
Samples: 197

Max nTPM: 166.2
Min nTPM: 12.6
Std nTPM: 20.6
Median nTPM: 42.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 166.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 148.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 100.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 99.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 97.7
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 89.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 89.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 89.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 88.1
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 84.1
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 82.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 103.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 103.0
FF:10153-102I9 76 years, female 104.4
FF:10169-103B7 60 years, female 101.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 13.6
Pig sample Sample description nTPM
Subiculum
nTPM: 13.1
Samples: 4

Max nTPM: 13.8
Min nTPM: 11.9
Sample A Female 13.7
Sample B Female 11.9
Sample C Male 13.1
Sample D Male 13.8
Dorsal hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 14.7
Min nTPM: 10.6
Sample A Female 14.1
Sample B Female 13.1
Sample C Male 14.7
Sample D Male 10.6
Entorhinal cortex
nTPM: 13.6
Samples: 4

Max nTPM: 15.6
Min nTPM: 10.2
Sample A Female 14.3
Sample B Female 15.6
Sample C Male 14.2
Sample D Male 10.2
Ventral hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 12.7
Min nTPM: 11.5
Sample A Female 12.7
Sample B Female 12.4
Sample C Male 11.8
Sample D Male 11.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 15.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.2
Samples: 4

Max nTPM: 16.1
Min nTPM: 14.5
Sample A Male 14.8
Sample B Male 14.5
Sample C Female 16.1
Sample D Female 15.4
Hippocampal formation
nTPM: 14.2
Samples: 4

Max nTPM: 16.5
Min nTPM: 13.1
Sample A Male 16.5
Sample B Male 13.1
Sample C Female 13.4
Sample D Female 13.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
69735257 Antisense, RP_050503_02_D07, Mouse strain C57BL/6J (56 days, male) 1.0

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