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PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

OTC
Synonyms OTC1, OTCase, OTCD
Gene descriptioni

Full gene name according to HGNC.

Ornithine transcarbamylase
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Human disease related genes
Metabolic proteins
Plasma proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome X
Cytoband p11.4
Chromosome location (bp) 38352586 - 38421446
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

1
Ensembl ENSG00000036473 (version 109)
Entrez gene 5009
HGNC HGNC:8512
UniProt P00480 (UniProt - Evidence at protein level)
neXtProt NX_P00480
GeneCards OTC
Antibodypedia OTC antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Catalyzes the second step of the urea cycle, the condensation of carbamoyl phosphate with L-ornithine to form L-citrulline 1, 2, 3. The urea cycle ensures the detoxification of ammonia by converting it to urea for excretion 4.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Transferase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Amino-acid biosynthesis, Arginine biosynthesis, Urea cycle
Gene summary (Entrez)i

Useful information about the gene from Entrez

This nuclear gene encodes a mitochondrial matrix enzyme. The encoded protein is involved in the urea cycle which functions to detoxify ammonia into urea for excretion. Mutations in this enzyme lead to ornithine transcarbamylase deficiency, which causes hyperammonemia. [provided by RefSeq, May 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
OTC-201
ENSP00000039007
ENST00000039007
P00480
[Direct mapping] Ornithine transcarbamylase, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of amino acid metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000050 [urea cycle]
GO:0001889 [liver development]
GO:0004585 [ornithine carbamoyltransferase activity]
GO:0005543 [phospholipid binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0005759 [mitochondrial matrix]
GO:0006520 [cellular amino acid metabolic process]
GO:0006526 [arginine biosynthetic process]
GO:0006591 [ornithine metabolic process]
GO:0006593 [ornithine catabolic process]
GO:0007494 [midgut development]
GO:0008652 [cellular amino acid biosynthetic process]
GO:0009410 [response to xenobiotic stimulus]
GO:0010043 [response to zinc ion]
GO:0016597 [amino acid binding]
GO:0016740 [transferase activity]
GO:0016743 [carboxyl- or carbamoyltransferase activity]
GO:0019240 [citrulline biosynthetic process]
GO:0031667 [response to nutrient levels]
GO:0032868 [response to insulin]
GO:0042301 [phosphate ion binding]
GO:0042450 [arginine biosynthetic process via ornithine]
GO:0042802 [identical protein binding]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0055081 [anion homeostasis]
GO:0070781 [response to biotin]
GO:0097272 [ammonium homeostasis]
GO:1901566 [organonitrogen compound biosynthetic process]
Show all
354 aa
39.9 kDa
No 0

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