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ZFYVE16
HPA
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  • ZFYVE16
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ZFYVE16
Synonyms KIAA0305, PPP1R69
Gene descriptioni

Full gene name according to HGNC.

Zinc finger FYVE-type containing 16
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 5
Cytoband q14.1
Chromosome location (bp) 80408013 - 80483379
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000039319 (version 109)
Entrez gene 9765
HGNC HGNC:20756
UniProt Q7Z3T8 (UniProt - Evidence at protein level)
neXtProt NX_Q7Z3T8
GeneCards ZFYVE16
Antibodypedia ZFYVE16 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

May be involved in regulating membrane trafficking in the endosomal pathway. Overexpression induces endosome aggregation. Required to target TOM1 to endosomes.... show less
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes an endosomal protein that belongs to the FYVE zinc finger family of proteins. The encoded protein is thought to regulate membrane trafficking in the endosome. This protein functions as a scaffold protein in the transforming growth factor-beta signaling pathway and is involved in positive and negative feedback regulation of the bone morphogenetic protein signaling pathway. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Sep 2013]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ZFYVE16-201
ENSP00000337159
ENST00000338008
Q7Z3T8
[Direct mapping] Zinc finger FYVE domain-containing protein 16
Show all
Transporters
   Accessory Factors Involved in Transport
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005545 [1-phosphatidylinositol binding]
GO:0005547 [phosphatidylinositol-3,4,5-trisphosphate binding]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005769 [early endosome]
GO:0005829 [cytosol]
GO:0006622 [protein targeting to lysosome]
GO:0007165 [signal transduction]
GO:0016020 [membrane]
GO:0016050 [vesicle organization]
GO:0016197 [endosomal transport]
GO:0030100 [regulation of endocytosis]
GO:0031901 [early endosome membrane]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0046872 [metal ion binding]
Show all
1539 aa
168.9 kDa
No 0
ZFYVE16-202
ENSP00000426848
ENST00000505560
Q7Z3T8
[Direct mapping] Zinc finger FYVE domain-containing protein 16
Show all
Transporters
   Accessory Factors Involved in Transport
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005545 [1-phosphatidylinositol binding]
GO:0005547 [phosphatidylinositol-3,4,5-trisphosphate binding]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005769 [early endosome]
GO:0005829 [cytosol]
GO:0006622 [protein targeting to lysosome]
GO:0007165 [signal transduction]
GO:0016020 [membrane]
GO:0016050 [vesicle organization]
GO:0016197 [endosomal transport]
GO:0030100 [regulation of endocytosis]
GO:0031901 [early endosome membrane]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0046872 [metal ion binding]
Show all
1539 aa
168.9 kDa
No 0
ZFYVE16-205
ENSP00000422356
ENST00000509562
D6RC80
[Direct mapping] Zinc finger FYVE domain-containing protein 16
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
40 aa
4.4 kDa
No 0
ZFYVE16-206
ENSP00000423663
ENST00000510158
Q7Z3T8
[Direct mapping] Zinc finger FYVE domain-containing protein 16
Show all
Transporters
   Accessory Factors Involved in Transport
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005545 [1-phosphatidylinositol binding]
GO:0005547 [phosphatidylinositol-3,4,5-trisphosphate binding]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005769 [early endosome]
GO:0005829 [cytosol]
GO:0006622 [protein targeting to lysosome]
GO:0007165 [signal transduction]
GO:0016020 [membrane]
GO:0016050 [vesicle organization]
GO:0016197 [endosomal transport]
GO:0030100 [regulation of endocytosis]
GO:0031901 [early endosome membrane]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0046872 [metal ion binding]
Show all
1539 aa
168.9 kDa
No 0

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